Array 1 8080-9160 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QNPR01000058.1 Xanthomonas oryzae pv. oryzae strain YN16 scaffold57, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	===============================	====================================	==================
      8080	    31	 100.0	    34	...............................	CGTTGAACTATACAAGCATCAGCGTTTAGCGCGG  	
      8145	    31	 100.0	    35	...............................	AAGAACAAGACCGCTGCCCTCGCCGCAGTTGGCTC 	
      8211	    31	 100.0	    35	...............................	CGCCAATGAAAACCTGCATCTGCTTCCTCACGACT 	
      8277	    31	 100.0	    35	...............................	AGCAGTACCAGACGCAGTTGCAGCAGTACGAAAAC 	
      8343	    31	 100.0	    34	...............................	ACAAGAGCGCAGGCGCGGGACGCCGGCGCATTTC  	
      8408	    31	 100.0	    35	...............................	ACCCGACTCGGCACACCATCCACACGCCGTTCAAC 	
      8474	    31	 100.0	    35	...............................	GGAGGTATGTGTGGGGGTTTGGCTCCGATATCATC 	
      8540	    31	 100.0	    34	...............................	TACCGCGAACACCCGGAAGCACAGGTCATTACAG  	
      8605	    31	 100.0	    35	...............................	CCGACCTCAAGGCGCGTTCCTCCGGTTCGATCCAA 	
      8671	    31	 100.0	    33	...............................	ATGGGTAGTAACGTATCCACGGCCCGTGAAGCG   	
      8735	    31	 100.0	    36	...............................	ACGTAGAACGAGCGCTTGTTATAGCGCTCGCGCCAC	
      8802	    31	 100.0	    34	...............................	CTGCACATACTCAATCAGGGCGCTGTCGGTGCGA  	
      8867	    31	 100.0	    35	...............................	TTTGCGACGGTGTTCAACGGCGAGCAGATTGACGG 	
      8933	    31	 100.0	    34	...............................	ACCGCATCCCGGAAGACCCACAATGTTGTCCGCC  	
      8998	    31	 100.0	    36	...............................	GCCCGACGGGTATGAGCAAGTCTTTGCTGGGATACC	
      9065	    31	 100.0	    34	...............................	CGCGACGGGCTGGAGCTGGTAACCCCGTCGCAGA  	
      9130	    31	 100.0	     0	...............................	|                                   	
==========	======	======	======	===============================	====================================	==================
        17	    31	 100.0	    35	GTCGCGTCCTCACGGGCGCGTGGATTGAAAC	                                    	       

# Left flank :   GGAAGTAAGAGGACGCCCGCGCATGATGGTCTTGATCAGCTACGATGTCAGCACCAGCTCCCCGGGCGGCGAGAAACGCCTGCGCAAGGTCGCCAAAGCTTGCAGGGACCTTGGTCAGCGTGTCCAGTACTCGGTCTTCGAGGTTGAAGTGGAACCGGCGCAATGGGCCGAGCTTAGGCAACGCCTATGTGATCTGATTGATCCCAGCGTCGACAGCCTGCGCTTCTACCACCTCGGCGCAAAGTGGGAAGCCCGCGTAGAGCACGTCGGTGCCAAGCCAAGCCTGGACTTCAAGGGTCCGCTGATCTTCTGACGCGAACCCCAAGCGACTTGCGAAAGCCGGGCAGGCTCGCGAAATTTCCAAGTGATTGATTTTAAAATAAAATAACTTCACTTGCCATCGCGGGTGCTCATATTTGCAAGGCATGGAACCTGTTCGCGTTCCTGTTCGCGAAATGACGGGTTTTCCCTCAAGACGCGCAAGCACTTATGCTGGCGGC
# Right flank :  ATGACGCGTCAGCATTACTCATAAGTCAGAAATATAGGCGACACTTGGATGCGTGAAGAACGAGCGCACCAATTCTGGTCGAGCTGCAATGTCGGACAACTGATCATGCACCCGATCGGCCAGCTTCTCGCCACTGCGCAGCGGGCTGCGCGCTACGCCCGTGCGCTTGGTGTAGCTCCACACCAACTCGTCGGGATTCAAGTCCGGCGCGTCACCCGGCAGGAAATGCAGCGTCAGCCTGCCCTTCAGGCTGTCCACGTCATCGCGCAAGCCACGGGTCTTGTGGGCAGGCAAACCATCACCTGATTAGCACGATCTTTCAGCACAGTCGCAGCCAGTGAGAGCCGACCGGTCGATGGTAGGACCGTCGCTCCACCGAGACCAGATCATGGCCATGAATCGTGTGCAGTTCCAAGCCGGGCTGTCGTTGCCG

# Questionable array : NO	 Score: 9.26
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [5,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-5.30,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [43.3-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.37,0.64   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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