Array 1 25026-22297 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOFI01000013.1 Pseudoalteromonas sp. 10-33 1033_s20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 25025 28 100.0 32 ............................ ACCATATTGCTTTGGTATAACTCAAAGTTGGC 24965 28 100.0 32 ............................ TTTTAACTTTGCAAGCTCTTTGTGTAACTCTG 24905 28 100.0 32 ............................ TTATCAAGTGGCGTAATGTTGGCGTTTTTAGT 24845 28 100.0 32 ............................ ATAAATACATTTGGTTGACTTTTCCAGCCTCT 24785 28 100.0 32 ............................ ACTACGAACGTGGCTAAGCTTTTGTTTTGATA 24725 28 100.0 32 ............................ TCTAAAGACTTTATGCACGACATTATAGTATT 24665 28 100.0 32 ............................ GTCAACTGTATTAGCAAGACCATCAACAGAGC 24605 28 100.0 32 ............................ TAAAGGCGCTGAATTTATAACAGAGCAAGAAT 24545 28 100.0 32 ............................ TAAAACTACTGCGGCAGCAGGTTGTGAAGTGC 24485 28 100.0 32 ............................ TAAAGTAATGGTTAAACTACGTGAAGAGGGCC 24425 28 100.0 32 ............................ TAAAAATCTTGAATAACCTGCTTTACTACACC 24365 28 100.0 32 ............................ AGTTGGGTCGGTTATGTTTGACTGCACACTTT 24305 28 100.0 32 ............................ ACAACCATTACGCCCGCTTATGTGATCAGCGC 24245 28 100.0 32 ............................ GCTAGTGCTGGCACAGGTGAGCAAAATAATCA 24185 28 100.0 32 ............................ AACATACTTTGATTAGCAAAGTGTTTGTAATC 24125 28 100.0 32 ............................ GCTAACGTCAGCAATGGCGAACAGACAAACAG 24065 28 100.0 32 ............................ ATATACACATACATACTGCGGGTAAAAAGCTT 24005 28 100.0 32 ............................ GTACTGAGTTGCTATATCTTCAATCGTTGGAT 23945 28 100.0 32 ............................ GTACTGAGTTGCTATATCTTCAATCGTTGGAT 23885 28 100.0 32 ............................ ACTAAGAAAAACAGTAGGTAAAGTATCGGAGC 23825 28 100.0 32 ............................ AATATGATACAATACAACAAATACCAAACATA 23765 28 100.0 32 ............................ TCAAATAATTGTTGATAACGTTATCAAAGGCA 23705 28 100.0 32 ............................ ATTTTAGACCTCACTTAGCAGTTTGTTTTTTA 23645 28 100.0 32 ............................ ATTTTAGACCTCACTTAGCAGTTTGTTTTTTA 23585 28 100.0 32 ............................ GTTAAACGCACAACAGCAAAAAACAGCGGGCC 23525 28 100.0 32 ............................ ACAATCAAAACAGTGCTGATTACGCTTGGCGT 23465 28 100.0 32 ............................ CCGATCCGTTTATAGTGCCGCGAGAACATGTA 23405 28 100.0 32 ............................ TCTAAAGGCATTGGTGTTGGCATGATTAAAGA 23345 28 100.0 32 ............................ AGATGATAAAACAGAATTAAAATTATTAATCC 23285 28 100.0 32 ............................ TCTTATATACGCCATTTTTGTTTAATAGATGG 23225 28 100.0 32 ............................ ATAAACGGCACCGTGTTTGAGGTTGATCAGCC 23165 28 100.0 32 ............................ AAAACAGTTACAATAACACTGATTTAAACACA 23105 28 100.0 32 ............................ GCACGATCATGGCATGGCAAGACAGACTAAAA 23045 28 100.0 32 ............................ ATTGTGCGGGGCTTTTTGTTGTCTACACGGTT 22985 28 100.0 32 ............................ ATAAACGGCACCGTGTTTGAGGTTGATCAGCC 22925 28 100.0 32 ............................ AAAACAGTTACAATAACACTGATTTAAACACA 22865 28 100.0 32 ............................ GCACGATCATGGCATGGCAAGACAGACTAAAA 22805 28 100.0 32 ............................ ATTGTGCGGGGCTTTTTGTTGTCTACACGGTT 22745 28 100.0 32 ............................ TTACTGTATGGTTTGAGCCATTCCCAAACCGC 22685 28 100.0 33 ............................ TGCAGCGGAAGTTATGATAAATAAATCATTCTT 22624 28 100.0 32 ............................ ACTTGGTGCTAATTTATATACTCAAGAGGTTA 22564 28 100.0 32 ............................ ACATGGATACTTGATTTGCCATCTGTACCAGC 22504 28 96.4 32 ...........................G GCACTAACCAGCCACTAAACAACTAAATACCA 22444 28 96.4 32 ...........................G TTTAACGGGAAACGCGCCACCAAGCTTATCAG 22384 28 96.4 32 ...........................G TAAAGACTGCATCTTGCGTATCAACTCATCAT 22324 28 89.3 0 ..A....T................T... | ========== ====== ====== ====== ============================ ================================= ================== 46 28 99.5 32 GTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : AAGCTTGCTTAATGATCTACAAGGGCTGGAGTGGTTAGGGCCTATAAGTGGCTATTGCCAATTAAGTGGTGTATTAACTGTACCTGAAAATACACAGTATCGCGTTATTTCTGAAAAAAGAAGTAATTTAAGCAAGGCAAAGCTAAGGCGCTTAATCGCCAGAGGTAATATCGATAAAGAAGGCGAAAAACGCTACAAGGTTAAAATGTTAAGTCAAGGTTTTGATAATCCATATCTAGACTTGTTCAGCAGTTCAACAGAGCAAGTACATCGCAAATTCTTTGAGTTTAGTGATATCAAAGCTGAACCTATCGATGGCGTCTTTGATTCATACGGGTTAAGTAAAACCGCTACAGTACCTTGGTTTTAACCTTTTAATTTCGCTCTTTAAAAATACAACATAAAAACAGTAGGTTACGACAGGTTGAGATTCGCAGGGTTAAATTAAAATAATTAACCTAATTACCTGTTGTAACTTATTTTTTGCCTGATATTCTATT # Right flank : AATGGTTATTGGCTTCCCACAGAGGTAGGTCTTCATTTTATAGCTGTAAAATATGGATAAGGGGATTGGGCATTCGATTTATAAAATGGTATGGTAAAAATTAATTGGAGGCAAAGTTATTGTATACAGTACACTGGAAGGTTTAATAAGAGATAGTAATATAGAATGGCCAGAAGAAACTAAAAACGTAGAGCTAAAAAAGACCCAAATATAGATGCTGATAATCTATGGGAAGAAATGTAGGACTAAAAGTTATAAAAGTTTTATTAAACGAATTTAGCGTGGAGGTTCGAATATGACACTGGTTTTTAGTACCACGATTAGTACCTATTCCTACATCGCTTTAATTTAAACCTTAATTAAAGCAACGACTTAAATTTTTGGTTAAGACTCCCCCAGCTCCACCAATAAAGGTTTTTAAATTCGTTTGTTTAAAAACCATAAAAAACCCGCAACTTGAGTAATCAGGTTGCGGGTTTTTTTATGTAATGAACAAAAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //