Array 1 226620-227453 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJVW01000094.1 Microcystis aeruginosa FACHB-524 NODE_6_length_329002_cov_246.492, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================ ================== 226620 35 100.0 38 ................................... GCGAATGCGGAGGGACCATCCTTGGTCCCGCTCCCACT 226693 35 100.0 35 ................................... CCCAGGTCCTCCCACTCCTCTGTTTCCAATCGGAG 226763 35 100.0 40 ................................... CCAAAAGCGCCCAACCACCCACCTTTACGGTCGGTTGCAA 226838 35 100.0 31 ................................... TCTAAGTACGCCCACGCATCAGGAATGTCCT 226904 35 100.0 34 ................................... TATTAGGTAATTCGCATACCGCCGGTCTATGCGA 226973 35 100.0 44 ................................... GCCTGGTTTTTCATCTGGTCAAAAAACTTACCACCCTCAGAAGT 227052 35 100.0 37 ................................... TCTTCAACCCAGCCTAAGTCGGCAGCCTCAGCCTGGA 227124 35 100.0 37 ................................... TACCTGTTGTGGGCCGAGACGTGAGTTCTCGAGCCAT 227196 35 100.0 38 ................................... CATGAGGGGTTCTGGGATCTCCCCCTGTACCACGTTAT 227269 35 100.0 38 ................................... AACCAAGACATGAAATACCACCGCTTTGCTTGGTGGGA 227342 35 100.0 42 ................................... CCTGATTATCCGTTGTTATCGAGACATCTAGGTAGATGGCCA 227419 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================ ================== 12 35 100.0 38 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : AGGAGGTTTATATTGGTAGCGCCGATTGGATGACGCGGAACCTGACTCGTCGCGTGGAAGCAGTGACACCCATTGATGAACCAGCGATCGCCAAGGAACTGGAAGAAATTCTCGGCATCATGTTGTCAGATAACCGACAAGCATGGGAATTACAATCCGATGGCAGTTATATTCAGCGTCGTCCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAGACCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTGATCAGTTATTAGTTATTAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGACAATTATTATTAATAATGTCTATGCTTTTCAATATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGCTTTGCAAAGCTAGT # Right flank : CAGAATGCCAGGGATCAATCCCATCTCATCGGTTAAGAAAAATCCGAGATTTCAGCAGGATTATGCGTCAGTGGGGACAACAATTTCAGAGGGACTTTAACCAGACTGAACTCGGCAGAATAATTTATGCGGGAGGAGATGATTTTTTGGGCATCGTTTATAATAGCCAATTTCCCGATCTACAACTCAACTCGATCTCGATCGAGTTCTCCACTGGCTACAAACCCCTCATAAGTAGGGTTTGCTGAATAAATGTGAAATGTAGGCAAGGTCAGGGTTTTGTGGCTTTTCTCGTGAAACAGGTGCAAGATTTTGAGAGAATCGTGCTTCAAAACCTTGCGTCTTCATCGGCCCGCGTCCTGTAGGGGCGAAGCATTCGGGCAGTAACCTATCGGTGAAACCGTAGATTTTCTATCCGAATGCTTCGCCCGTACTTTTTCAGCAAACCCTAAGTAGCGATCGCACTTTCAAAAGACCAAATAATCACATTTAAAGGATTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 229749-231105 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJVW01000094.1 Microcystis aeruginosa FACHB-524 NODE_6_length_329002_cov_246.492, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================ ================== 229749 35 100.0 36 ................................... CATTATCATACTCCCAACCCTGACATTCTGATGCTA 229820 35 100.0 42 ................................... TTTTATTGCAACAAATAACATGAGCGAGCCACTATCTATCAG 229897 35 100.0 34 ................................... GGGAGGGAGGTTTGAGCACCATCCCCCAGGTGTC 229966 35 100.0 35 ................................... GTTGTCTTTCACATCTACCTGCAAGGCGCCCCCAA 230036 35 100.0 35 ................................... AATTTGTAGGTAGGCGATAGGTTTTACCAGTCATT 230106 35 100.0 39 ................................... ACTCGACTAGAGCCACAAGAAGTCGCCTTTTTCCGAGTT 230180 35 100.0 34 ................................... AACAGTCATTCTTCGTACCTACGTGGTACAAGGT 230249 35 100.0 38 ................................... GGTTATAGTGATAGATTGGGTCTCAATTACCTCCATTC 230322 35 97.1 43 ...............C................... TTTGGCTCCACTGAGCTAAAGCTACCGAGGGGTAGCTTAAAAT 230400 35 97.1 40 ...............C................... CACAGCCATGAGGCCAGACGGTCGACCCCTATAAAAAGGG 230475 35 97.1 38 ...............C................... ACTTCGGGTATTGCTTCCACGTAGGGATACTGCCCTTT 230548 35 97.1 41 ...............C................... AACAAATAGCCCTAAGAAAGCTACGGCTAAACTCTTTGCTA 230624 35 100.0 43 ................................... CATAGAGTTTACACGAATCAAGCTGGGTAGGGACGTTGATTAT 230702 35 100.0 37 ................................... GGGGCTGTAATCAATTGGGTAATTTGAGCGCCGATTT 230774 35 100.0 35 ................................... TTTTCATAGAATTTGCGGAAGTTGCGAAAAACAAC 230844 35 100.0 44 ................................... CGCTTAGGGATATTTCTATCCCGTTGCTGCCCTCAAAAAATCGG 230923 35 100.0 39 ................................... ATATTAATTAACCCTGTAATCGAACTAAAACTAATTCTT 230997 35 100.0 39 ................................... AATGTGTAGGGTTAATTCATGAATTGACCCTACAATTTT 231071 35 74.3 0 T..AA........A..T...T.CC.....A..... | ========== ====== ====== ====== =================================== ============================================ ================== 19 35 98.0 38 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : ATTACGATTCATCAAGTTGGTCATCGTCGAGATATTTATTCTGATTAGTTTTAGTTTAATTACTTCCATTCCAAAAAATTGCTCCTTCCAAAAGCGATCGCACTCCCCATCATCAAAATCGCCAAAAAAGTTGCTTCTCCCAAAAGTGATCGCTATTCCTCATCATCAAAAAGCGATGTCGTGCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAAGCCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTGATCAGTTATTAGTTATCAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACAAAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGAAAATTATTATTAATAATGTCTATGCTTTTCAGTATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGTTTTGCAAAGCTAGT # Right flank : CGATGCTTAATTAATAAAAATCAATAAAAATAAAGATTGTTTAAGAAAAATTATTTAAAATTAACACAATAATTAGAAATTTAGTGATAGATATAAAAGTACAAAAGAGCCAATTAATCTAACAATCCTATTTTTTTAGCCAGAGATAAGTCTTTTCTAGGTCTTTTCAAGGCTGTTGAATATACCTCTTAAACAATCGAGTTTTCTATAGCTTTATGCCCAAATATATAGCCATCACCTTCTCCCCCGTCCAAAGCTTTATTGAAAAATCCCGCAAATTGAGGGACCTGTACGGAGCCTCTCAGATTCTCTCGGATCTGACCAGTACAATCGTCACCCACCGGCCCGAGCAGTACCACCTAATTAGCCCCGGACTGCTAAACTCCCAACAGGGAATGCCCAACCGTGTTCTCCTGAAAGTCGATAGCGAAATGCAGTCCTCCTCCTCCGAGGAAATCATTGCGGAACTGCAACGAGCCTTTTTAAATCGTTGGAAAAAT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : CTTGCTTCCAATTCGCGAAGCGTATGAATGGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 70358-70026 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJVW01000062.1 Microcystis aeruginosa FACHB-524 NODE_25_length_147065_cov_241.306, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 70357 36 97.2 39 .G.................................. CAGAAATACTTATTTCTGGAACCGTCCAGAGATAGAGTT 70282 36 100.0 39 .................................... AAAGAACGGTTATATGTCAAAATATACCGTTTCTAAACT 70207 36 100.0 37 .................................... TGGGGTTTCCGGTCATTACGAACCCCGAGGCGATTGC 70134 36 97.2 37 .............................A...... ATTGTCCACCACCTAGAATTAGATTCGATAAAAAGTG 70061 36 91.7 0 A............T........T............. | ========== ====== ====== ====== ==================================== ======================================= ================== 5 36 97.2 38 GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Left flank : ATCATTATCAGGGTGATAGAATCAAAGCCCATATCTTTTTGTGTATGTTGGCTTATTATGTGGAATGGCATTTAAAACAGTGCTTGGCTCCTTGGTTATTTGAGGATGAAGAAATTGATGATAGTTCTCTGAATGTGATTAAAGCTAGTCGCAGTGAATCCGCTCAATCTAAAGAGAGAAAAAAACGGAATCAAGAAAACCTCCCTGTGCATAGTTTTCGGACTTTGTTGGAAGACCTGGGGACAATTTGCTTGCATACAGTAGAATGTACGATTAGAGAAGGAAGTTATCGTTTTTCTAAGATAACTTGACCGACTGAACTACAACAATCATGCGTTAGATTTATTAGGGGTTTCCCTAATTTGTACCCAGTAACGGGGCGGCGGAAATTCTTTTAATCCCTCCTACAGCACAGGTTATGGCCTTTTGTCAACAGGGAAGTCCAGTAATAGGTAAGAGATAAGAGTAGGGCTAATTCCGGAATTAGCCCTACTTTTTTA # Right flank : GATAAGAGTAAGGCTAATTAATGAATTAGCCTTACTCTTTATGTTTCCAACTAATCCTAATTTGTCATTAATTTTGCTTAGGTACTTAACTATAAACGGGATTATTTCGGCCAAAGTTTTTGAAATTTTCCCGCTTGACCATTATTCTCGTCTAGAAAACCTAGAAAATAAGCACAATCATCAGAGTCATCAGGAAAAATTGTTAATAATTCTAGATATTTATAGGTGTCTTTCGGTCTTTTTTTGCCCTGTTCAGTAGTGATAATATTCACAAGGGGATACATTCGATGCCAAAGACAACCAATTTGATCGATACTTCCTGTCACCGAGGTTTTATAGATACTTAAATTATCCAATTTTTGATAGGCTTTGTGAAGCCATTTTATGGACAGGGAATCATCTTTATTTTCGGCAATTCTTCCCCAAACCTCGACATTTTTAGGATGCCAACTTTCTCGCCAGTTAGCACTATTATCGGGAGTTATGGGGATATCTTTTTG # Questionable array : NO Score: 2.84 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAACTAATCCTATTTGACCTAATAGGTAAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 9775-7313 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJVW01000087.1 Microcystis aeruginosa FACHB-524 NODE_51_length_86491_cov_1171.75, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 9774 36 100.0 37 .................................... ATACTCATTATCGCCATTTTTGGGAACTACTATTCCC 9701 36 100.0 35 .................................... ACCTCTGTTTTCTCTGGACTGCCTTTTGGAATTGG 9630 36 100.0 35 .................................... ACACTCAAAAGCTTTTTGACGCACTAGAAAACTTT 9559 36 100.0 34 .................................... GACTCAACTCGCGAGGACAAAAATTCTGGTAGTG 9489 36 100.0 34 .................................... TATCCCCCTGTTCGACTTCCTTTAACTGGCTCAA 9419 36 100.0 36 .................................... GTGGTGGGGCAGGTGCTAGTTACGGAGGCTGGTAGT 9347 36 100.0 36 .................................... GGGCTTTTGTTGGGGACTATAGGGGTCACAACGCTA 9275 36 100.0 34 .................................... AGGACTTGTGGGCAGGAGCGCTCTTGGTTCAGCC 9205 36 100.0 34 .................................... AACCCCATGACGCAAAACTCAAAGCCAGACAACA 9135 36 100.0 36 .................................... AAAATAGTGACTATTATGTCGTGACACATGGAGAGT 9063 36 100.0 36 .................................... AAGTTACTCAATTTGACCGTAGAACCCGCATGACTT 8991 36 100.0 36 .................................... AAGGAATGCTGACCTCTTACTACAGACGATCTGGGA 8919 36 100.0 34 .................................... TCTGCTAATCAAGATGCCCCTATAAAAGTTGTGT 8849 36 100.0 34 .................................... AAGAAACACACGAGGTAATACCTGACATGTATGG 8779 36 100.0 35 .................................... TGCTGGTATTCTTTCTGCATTTCACGAGCGCTCAT 8708 36 100.0 35 .................................... CGTTACCACAATGTCTTCAGAATTAACTAAAGGGT 8637 36 100.0 34 .................................... AGTGTACCTCCTGTAATGACTGCACAGATAGCAC 8567 36 100.0 35 .................................... GGTCTGTGGAGCCGATTTTAGAGGATGGGCTGCCG 8496 36 100.0 35 .................................... GGCGTAAAGCCAATATTTCAATGGGGGGAATTTTC 8425 36 100.0 34 .................................... CTGAACAAGGCAATACATCTTCATAAGCAGTTAA 8355 36 100.0 36 .................................... CCCGATCTTCCTCAAACCGTACCCGAACGTGAGTAG 8283 36 100.0 36 .................................... ACTACAATTTTTAAGCCCTCTAAACTGACTGCAGTC 8211 36 100.0 37 .................................... AAAAGGGTTGTCCCTATAGCACGCGCGTCATCGGGGG 8138 36 100.0 38 .................................... ATATTTAATCCAAGACTACTAAAAGCTGATCCTATTCC 8064 36 100.0 35 .................................... ATTTTAGCCAAAACTTGTCTGACTCGTTCTTTCCC 7993 36 100.0 37 .................................... ATTTCTTTAGTCATTGGGCTTATCAGTGGAACTATTT 7920 36 100.0 35 .................................... TATTCTATTATTCTGGGTATGTCAACCTACTATAT 7849 36 100.0 35 .................................... ATTCTGGTAAGCGGAAACTTTAGGATTTTCTTCTA 7778 36 100.0 36 .................................... GAATTATGGCTAATTGTGTATTTCGAGGACCAAAAG 7706 36 100.0 35 .................................... GTAGTGTGGTTGGCTCACCCCGGGACATTGTAGAT 7635 36 97.2 34 .................A.................. GATTTCCTCTAATCTCGCCCAGCACGCTTCTGTC 7565 36 100.0 34 .................................... GAACTGGCCACGGGAAACCGTGCGAAAAAATGGT 7495 36 100.0 39 .................................... GGTATTTTGGATGATTCTAAAGGTTTTACTAGGGCATAA 7420 36 100.0 36 .................................... AATTAGTCCTGATTTAATAGGAGATAATTCTTTTAT 7348 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 35 36 99.9 35 GTGTACTAACCTTTGATGCCGTAAGGCGTTGATCAC # Left flank : GTCCGCAACGCTGGCGTAAAGCTTACAAAATTTTAGGCGGTTACGGCGATCGCATTCAATACTCGATTTTTCGCTGTTGGTTAAGTGCGCGAATGCGAGAAAAATTGCGCTGGGAATTGGAAAAAGTCCTCACCCTAAAAGACGACTTAATTTTAATTCGTCTGTCGGAGCAGTGTGTGCGCGATCTGCCTAAGTACAACCGACCTGACACATGGCTTTTGGACGAAAAAGGGTTTCGGGTAATCTAAAAAAAACAAGCATCTCTGGCTGGGAAAAAATCCACGGGCTAAAATTTATTTGTATTGCTAATGCTGTCTCGGTTTCAGGGTTTGACAAGGAACAATTCCTGCTTGCATTTTCTAAAAATCTCACTGGATAACGGTTTTCAGATTCGGTGCTGTCACTCAAAAGCTCTGATCAGAAGATTTCTTGGCGTTTTTCTAGAGGTGCTTGTAAAATGGACTGTGAAGCTATACACCAAAGGCTTTTTCAGCCTTGCC # Right flank : GAAGACACCCTACTGGACTGTTTCAGCTAAAATAGGGCAATAGATTTCGGCTTAAAGTCTTAGATTATAGAATCTATAGCATTTTTCTAATACACCAAATTAGCTAAAACAATTCACTACAAGAAATTAAGCGTATTACCCCTTCGGTGTGATAAAGTGAGAAGCGGAGATTGATGATAGGGTTGCTCATTTGTAGGGGCTAACCGATGAGGAAATAAAGATTATTAGGGGAGAGTAAGCTTTATTATGCAAGTCGCAGAAAGCAATATTTTAACAAATAATGCAATTCCTACCGAAACTGTAATTTTCATACCTGGATTATTCCATGAAGAAAAGGGATATTATTTTGATATTCTGAGCGAAGGACTTGAAAATCAAGAGCGGCTAAACTTGAAATCAATAGGTGATGTAAGTATTCCTGGTCATACTGGGAAAAAATTTGGAATCTATTCGGGAAAAAATTTATTAAAAGAAATTCATATCTATGAAGCTTTTTGGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTACTAACCTTTGATGCCGTAAGGCGTTGATCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 982-3702 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJVW01000089.1 Microcystis aeruginosa FACHB-524 NODE_52_length_81483_cov_239.769, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 982 37 97.3 39 ...G................................. TAAATTATGATCAAGATAATATGAATGACAAAAATCAGT 1058 37 100.0 37 ..................................... GACGGAAAGACGCTGACTCATGCCTATTACACACATT 1132 37 100.0 34 ..................................... GTGGGGGAGCGACAAAAGCAAACATTAGAGATTA 1203 37 100.0 35 ..................................... AAATCGCCCGGCACTTGATTAGTACAGGCTAACTG 1275 37 100.0 34 ..................................... TTCTACTGTATTTAATCCCGCAAAACGCAAAAAA 1346 37 100.0 42 ..................................... TTTGCTCTTTCCTTTCTTCTTTTTTGCCAAACGGCCACCACG 1425 37 100.0 35 ..................................... CGGCGTTCGATGGGGAAGGCCAGGCGATCGGATAC 1497 37 100.0 36 ..................................... AGAATTTTATCATTTACAGTCTGAAAAGGAATTATC 1570 37 100.0 34 ..................................... ACCCGTCTAATCATCGATGGTTTACCATGCCCTA 1641 37 100.0 34 ..................................... GAGCTAAAATGTTGAAAGTAAAGTACGAAGGATT 1712 37 100.0 36 ..................................... TAATATGGGTGTACCACCGAATTTTTTAGGAGCCAA 1785 37 100.0 35 ..................................... AGCCTTGGCTTTTTTGCCCCTTAAAATTCTGGCAA 1857 37 100.0 35 ..................................... TAGATGACAGTTTAGATTATAAACTGCGAATAATA 1929 37 100.0 36 ..................................... ACTTTATAATCGGATCTATTAACAACTGGCATATTT 2002 37 100.0 34 ..................................... CCCTCAGTTGCCTCGCTATCCCACTTGTAGAAAT 2073 37 100.0 36 ..................................... TGTGGAGTACGCGGCTTATGTTCACGAAGGTTATGT 2146 37 100.0 33 ..................................... CTTTTTCTCCTCTGGATTTTTTGACTTTTTAGC 2216 37 100.0 39 ..................................... CGCAATCTGAAATTAGGATTATTGCCGTAGATCGCCCGT 2292 37 100.0 40 ..................................... ACAAGCAGGCTTTTTTGAGGGCTGGTCGCTGGGTTGCCAC 2369 37 100.0 37 ..................................... CAGCATAAGCTCGCCCGCTTTCTGTGATTTTAAAAGT 2443 37 100.0 39 ..................................... ATCAGAAAAAATCAATATAGGGAATTAAAAATGCACACA 2519 37 100.0 35 ..................................... ATCTGCCAAATACTCAAACTAGAAGCAAAAATCAA 2591 37 100.0 35 ..................................... TGATCGCTGATTCTGAGTTGGCAGATTCAGTCAAT 2663 37 100.0 35 ..................................... TTCATTGTTTTTACCTCCTAATTAAAATTCACCTT 2735 37 100.0 35 ..................................... GTGTAAAGGCTTTTTAGCCCTAAATTTATCTCTTT 2807 37 100.0 34 ..................................... AGAATTGGAGCTTATTCAGGCACTTAAGGGGCTT 2878 37 100.0 34 ..................................... TTTCGCCTTGGGCGATCGCTTGCTCTAGTTGGTC 2949 37 100.0 34 ..................................... AGAACGGCAATTCAATCAATCATGACCAACGGGC 3020 37 100.0 36 ..................................... CCGCCATCAGCAAAACCAGGAATCGGCAACTTCAAC 3093 37 100.0 36 ..................................... TTAGTTTAGCGGCAGCGGCTGCCACTAAACCAGAAA 3166 37 100.0 34 ..................................... AGACACAATAACGACATTTTTAAACGCTATAATT 3237 37 100.0 33 ..................................... TTGAATCCTAACTCTTTCCCTAAATCAGCAGTA 3307 37 100.0 36 ..................................... TATCGCATTGATTGAAAGTGTGGTATGATAGTAAAG 3380 37 100.0 34 ..................................... GGTTAATTTTTTCTAAATCGAATCGGTACGTCGG 3451 37 100.0 37 ..................................... AGATTAATTCTCTTAGTGCCGCTGGTGATTTTTTTTA 3525 37 100.0 34 ..................................... TTTAAAAATAGCTGCAAGTTAACCCTAAGTCCTT 3596 37 100.0 33 ..................................... AGGGGTTAATGGCGTTTCGGAGCGCCAGTTTTA 3666 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 38 37 99.9 36 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : ATTTGAAGCTACGTTGTGCTTATCTCAACGGCGATATTGCCTGAGTATTTTTACTCATTGCAAAACTGGGATGCTCCCTATTTATTGCTCCCCAACTCGTTCGGTCTATGGCAATATATACTAATCCTTTTATTGTGAATCTCTCCTGCTGTTTTAACATCTCTTTTAAGCAGAGAAACCAGATTTTTTCAATATTCAGAATTTCCAGCTTTAAAAATCTTTTTAGTTTTTTTCTCCGACTCTCAAACAGGATTGGTATTGGTAAGGCTTCAGCTAATATCTCTAACTTAGCTTGCTTTAGTATTTGCAAGGTTCCAACTATCATTAACAACAGTAGATATCTGGCTCGTCCCAGTTCATTTTCTAACACTTTCTGGTATAGTTCACTTATCATTTTCGTTATTTAGGTCATATATGGTAAATATGACTTATCTTTTTTTGGAGTCTGTGTCTGTATTTTATGTTACATAAGCTTTTCAGCTTGCTTGTCCCCCTGTCAG # Right flank : CTGGAACTTGAAACCTTCTAGTCTATTAATTTCAAAATGAGAATTGCTGTCAGTGAGTTTATCGAACTGCTTGCGTCCAAAATATCCTATAAATTAGAGGAAGTATAAGCTAATTTGTATTGATAGTAAATCTGTTTTTAATAGTATGAGCAACTCTCAATCGCACGCTAAAAACCTTCTCCCTTGTTCCTTCTCCCCACTTCCCCATACCTATTACCTAGCATTGTTAGTATTCTATAATACCAATGCTTAGGAAACTATAAAGAAAATCCCAAGATTAGGCGAGTCCCTTGGCGAAAAAGGCTATAGTAGCATAAAATCCGTAATTTTATCTACAAAATTGTTATGACAGTTACCAATAGACAAGAGCTAGAAGAACTGATTCAACAGGTGAAAAAAGCTCAACAACAATTTGCCAACTATAGCCAAGAACAAGTAGATCTTATCTTCAAAAAAGCGGCATTAGCAGCCAACAACGCTCGCATTCCCTTGGCTAAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : NA // Array 1 28804-27230 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJVW01000090.1 Microcystis aeruginosa FACHB-524 NODE_55_length_79142_cov_236.877, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 28803 36 100.0 38 .................................... AAAACCAGACCAATATATAGCAGTCAAAAATTTCTTTT 28729 36 100.0 37 .................................... TTGTATAGTGAAATCAACAGAAGATTTATCATCTTTA 28656 36 100.0 36 .................................... AAATAATTCTACAGATATGTCGCACATACAGTAATC 28584 36 100.0 38 .................................... AGTAACGCTGGCACAATTAACGTTGTGAGCCTCGGTTA 28510 36 100.0 40 .................................... AAATAGTTACAGTTCCACTCTATATCTGGGTATTTTTCTT 28434 36 100.0 36 .................................... GTAGGCAAAATCACGCTTTTTATTGAACGAAAACAC 28362 36 100.0 38 .................................... TTATCGCTTTTAATGACTAAAATAATTGAGTATTTTTT 28288 36 100.0 42 .................................... CATAGCACTACTAGCAAATAAAGTATCAAATACTCCCCCTAA 28210 36 100.0 35 .................................... CCATCTGTAGTCATTTCTTCGCTTGGTAGATACAA 28139 36 100.0 39 .................................... TGAGACTGATGATTTTGAAGAGACATCTTTTCTTCATAG 28064 36 100.0 37 .................................... CATATCTGATCCCTTTCGGCCCGAAGCTGCTCAATTG 27991 36 100.0 35 .................................... TTAAAGGATTCGTAAACTCGGATGAAATTCTGAGC 27920 36 100.0 38 .................................... TTGCCGCCTGTCAGTGCGTTTAATGATTTTTTTTGCTC 27846 36 100.0 36 .................................... AGAAAAGGGATACCAATCAAACTACCAGCAGAAGTT 27774 36 100.0 35 .................................... TCTTCTAAGTCTTCTAGATACTCGACTAAAGCTTG 27703 36 100.0 37 .................................... ATCCAAGATGTTTGCTCTTCATGTGGTTTTGATATTA 27630 36 100.0 40 .................................... TTTTCTTGCGTGATTTCGGTTTTTATCACATAAATTCTAA 27554 36 100.0 35 .................................... TTCTAAAACCTGATCCTGAAATTCTTCAAATGACA 27483 36 100.0 37 .................................... TCCCATTCAGTGGAATCGAGATTATTTCTCTCATCAA 27410 36 100.0 37 .................................... AAATTTAGACTCAAGGAATTTAATTGTCGTTTTTTCT 27337 36 100.0 36 .................................... ATGAAGATTTTTACTATGGCACTTAGGACAATGTTT 27265 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 22 36 100.0 37 CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Left flank : TACTTCTGTTAATGCGTTGTGATCTTTCCCCGAATGGTAATTTTCCGAGGGATCGAGGGTTTGATAACCGACTCCGGGGTGTCGGACGAGGGTGGCGATCAGGAGCATAAGTCGCTGGAACTCGCGACTATCTCGTTCACGCAGTGTTCTTTCCCTAGAGGATTTGGGGTGCTGAGTCATACAGATGCAATCGGTTCAGTCAAGGGGAAAGCCGATATAAATTTACTTCACTCCGAGGGCTAGAAAATCCGATCAGGACTGGAAAAATCAGCCGCTCGATCGAGGGGTTAAATTATTGGCTTTTTAGGGTATCATCGACTGGCGACCGACAGGGGTGGGAGCAGATAACCTCGGTTTCCAGTAAAATCCCTCGATCTACCACAGGATAAGGGTTTTGTGGTTTATGGGGTTGACGGTGCGACCGTATCTAGCTATAATTAACTTATCCGTCGCAACTGGCTTCCGAACCCCAATCCTGTTCGGACGTTTGCCTACCGGCT # Right flank : TGAAACCTTTGCCTCAGCGTGCATCTGCCTCCGGATACGGGCAAAGGTCTTGATGCAACGCAAACCTGTTATAATAATCAACCAGATGGGAGCCGTGACTGCGTGCGTAGGTATCTAGGGCTTTGGGGTGGGAAAACTGGAATGACAACTGACTTTATCGAGATGTACGAAAATGCTTTACCCCCCGAATTGTGCGAAGAGATCAGGCATCGTTTCGAAGCCAGCGATCGCAAGTCAGATGGACGGATCGGTCATGGAGTCGACAAATCCAAGAAGAACAGCACCGACATCACCATCACAGGCCTCTCCGAGTGGAGCGATTTGCACAGTCAGATACTCGACAGCACACTGCGTCACCTGATGTTGTACATTCGCAAGTATCCATACCTGATCACCAGTGCGTTTGCATTAAGCTTGCAAGATCCGGCTACCGGACTGCTCAGACCCTTAACAGCTGCGGTTGTTGGGGCGGCATCAGACCCGGAACTCGCCGAGTACCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //