Array 1 57665-57364 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIRE01000044.1 Paenibacillus thalictri strain N2SHLJ1 Scaffold43_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================= ================== 57664 31 100.0 36 ............................... TACCAAAGGTACGCCCGCTTGTATCTCGGCAATCGG 57597 31 100.0 35 ............................... TGTCCCAATCATCAAAATGTTTATTGCCTTCGATG 57531 31 96.8 39 ..................G............ AGACGATCAACGCGCATTTTAGACACAACACCGCGCACG 57461 31 96.8 36 ...............A............... CTCGGTAAGGAGTTCGAATTCGTTGTAGAGACAGCG 57394 31 80.6 0 .....C.....T.AA...........A.T.. | ========== ====== ====== ====== =============================== ======================================= ================== 5 31 94.8 37 TCGCATCCCATGCGGGTGCGTGGATTGAAAT # Left flank : GCATCATCCGCTGTACAATGCTCGCCTTTAATTCCCTGCTTACAGGATTCATGGGTGTCCACCTCGTTCTCGTTTTCCTCACTATACATTCATACAGTGGGTACGACAACTATTTTGACAGAGGGGGGTACG # Right flank : TGAAGCATCGATTACTCTCTGCTAAAATTTGCAGTGAAAGGTGGTCGATTTTGATGGCGAATCATTTTGCCAGTATGCCACGCGGCTCATACAAAGCCTATTCTTAGGGCGGACCTTTGTATGGGCGGACGATCAGTAACCCTGTCCGCCTGCAAGACGTTTCAAAGGATGGGCTTTGCACCTTATTGTTTAATTTTAAAATAAGGGAGTTGAGTGCATTGACTAATCCATTCAAACGTCAACATCTCATGGATCTGCAAATTCATGTCCAACAATTGTTAGTTGAACTCGCGAAAGACGATATCGGCGCAGGGTTCCAAGCAGCAGCCTACTGGCACGGAGAGCCGGTTCTGAATGCTTTTTCAGGCAGTGCTGATGCCGCAGGACGACACTCCGTGACCCCAGATACTTTATTCGTTGTGCAATCTTGCTCCAAAGGCATTATTTCGACTGCCATTCATATTCTCGTCCAACAGGGCAAGCTGGCTTATGATGAGCGG # Questionable array : NO Score: 8.72 # Score Detail : 1:0, 2:3, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCATCCCATGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 4836-3913 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIRE01000017.1 Paenibacillus thalictri strain N2SHLJ1 Scaffold16_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ======================================= ================== 4835 33 97.0 34 .................G............... ACCTTCGCGACAAATGCCCCTGGAATCGGTTTTC 4768 33 100.0 39 ................................. GTCTCATAATCGCTGAGGTAATTGTTATACATCTGCGTA 4696 33 100.0 35 ................................. AGTTTATGAGCGGTTGTGTGCTTTACAGTAACAAC 4628 33 100.0 33 ................................. TGCGCATTATACAAGCCTCCCGCATAAGGAGTT 4562 33 100.0 33 ................................. CGCAGACCTTAACACATTCGCCGCCGCGAACAG 4496 33 100.0 35 ................................. CTTACAGAAATTAACGGCATCAGCGAGTTTTTCAC 4428 33 100.0 36 ................................. TCCGGTACGCTCTCCTGCAGCTTGGCACTGGGAGGG 4359 33 100.0 39 ................................. CGCCTTCCACCGTCGCAAGTACAATATTTACATCAGCGC 4287 33 100.0 36 ................................. TCAACCGTTCGTCCAGGTCAATACCTCGCTGCTTCG 4218 33 100.0 35 ................................. AGGAATTTAACCGGGACAATGTACGCCAGGTAGCG 4150 33 100.0 36 ................................. CTCCCCTAGCACAATTTTCCTACATCATACCATTAC 4081 33 100.0 35 ................................. TTAAATAGTCTCCGTGGCTAATTAGTCCCTGAATA 4013 33 93.9 35 .................G...A........... TGTAGGTGTGAGCCTAACCACGACCTATCACCTTC 3945 33 87.9 0 ..........A..C...G.............C. | ========== ====== ====== ====== ================================= ======================================= ================== 14 33 98.5 36 GTCGCATCCCGTATGGGCTGCGTGGATTGAAAT # Left flank : GTCAGATACTGGGCGGGCCGAACGATTGTCAATTGCGGCAGCATCGGCATGCCGTTTGACCGCGACAACCGAGCCAGCTACGCTGTTATCGATTTTGCCGGATCGAATCTGGCCGTGCAACTGCGCCGGGTGGAATACGATATCGAGAAGGCGCTTAAGATCGCCAAGGAGCTGCAAATGCCCGACGCGGACGCTTTTGAATATGCGATAAAAACCGCACGGTACCCATATAACGAGAAAAAACAGCTGCCTATATCGTAGCGGCACAGCGGGTCGGCTTTCCGAAACCTCCTCATTTAAACGGCCGCTTGGATGAAGTGCAATTCTGCGGTGCGAATGTGAAGCTCACATACTTTTCCCGGGAGATTCGCACCACGAAAATGGATAATATACCCATATTTTGATTGTTTTTCTGCTGGCAGATGCTTGTAGACCTAGTAATTGGGCGCTTTTTTGACGAAAAATGCGAAGGTACGTGCGTATTTTATTCGAAAATCGCT # Right flank : CCACATTTTTCAAATCATCGAACGATTGGGTCATAGTAGTGATGAGCAAGTAAGAAGTGTGTATTTACACGTTACTAAGACCATGAAAAACGAGGCGTCCCAAAAATTCAGTGAACTCATGAAAAACCTTTAGCTCATCTGGATGCGAATGTAAGATTGGTAATTGTGAGACAATTCTGAATCAGCTTGTATCTCTGTCAATAGAGTAGACACAAAGAATCGAGAGAATCAGGCTTCTTTTCGGTACATACGTTCGTATTCATTGGGTGTCAGATACCCAATGGTAGAATGGATACGCTTGGCATTATAGAAGCAGGTGATGTACTCGAAAATGCGCTTGCGAGCTTGGTCCCGGGTCTTGAACTTCTCCAGATAAATCAGCTCTTTCTTGATCACGCTGTGGAAGGATTCGATGCAGGCATTATCGTAGCAATTCCCTTTTCGACTCATACTGCCCTTCATCTTGTAGACTTTTAAACGGGCCTGATAATCGGAGGATG # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGTATGGGCTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 8728-9694 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIRE01000005.1 Paenibacillus thalictri strain N2SHLJ1 Scaffold4_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 8728 33 97.0 33 ................................G TCGCTCTGGTCGCGTCTTTCTTAAACTTATCCA 8794 33 97.0 34 ................................A ATTTTTTGTGGCGATTGTCGCCGGTTTCTTTCGG 8861 33 100.0 33 ................................. CGATTTTCAGAGCGCCAAATTCGCATTAACTCA 8927 33 100.0 34 ................................. CCGTCCTGTTATCTGATCTTGCTTTGAAAGGAGC 8994 33 97.0 34 ................................G CAAAAGTAGTGTCGTAATTCTGCCATCCATTCAG 9061 33 97.0 34 ................................C TCCAGTGCATCAGCAGCTGGACCTCCTATTCCAC 9128 33 97.0 33 ................................C ACTTGCCAGCATCAATGAGGATACCGGTACTAG 9194 33 100.0 33 ................................. CTGTCAACCGTGTCAACTTTCCAAAAATAGAAA 9260 33 100.0 33 ................................. TTCGGACAATCAAATAATGCCAAATTATGTAAA 9326 33 97.0 36 ................................A ACCAGATAGAAGCGTGAAGCTGTAGAGCCAATTCTT 9395 33 97.0 36 ................................G CGTATTGCGGCATCTTATTAAGCAACTCTTGCCCGA 9464 33 97.0 33 ................................A TAAAAAGTCCGGTCTTAACATTTCCAGAGGTAT 9530 33 97.0 33 ................................C CCGCCGCATCAATAGCCGTAATCTTAAATGTGT 9596 33 97.0 33 ................................A TCGGAATGAGCGGCATTACAGCACCACCCAACC 9662 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 15 33 98.0 34 GTCGCATCCCTCGCGGGTGCGTGGATTGAAATT # Left flank : TTTTATGTGGAAGTAGGTGAATGAATGGATGCTGGTATTGATCACGTATGATGTCAGTACGGTTAGCAGTGCAGGGCAAAGAAGATTGCGGCAGGTATCCAAAGTATGTCAAAATTACGGACAACGCGTTCAAAATTCCGTGTTCGAATGCATTGTAGACGCTGCTCAATTGGCTGTGTTGAAGTTAAAGTTGCTGGAGCTTATTGATGAAGACCAGGATAGCCTGAGATTCTATCAATTAGGCAACAACTACAAAAACAAAGTGGAACATGTCGGTGTGAAGCCATCGCTTGATATGGAAGGTCCATTAATATTATAGTGCGAATATGTGGTGCGAATGTGAAGCTCACATGATTTTCCCGGGACATTCGCACCGAGAATAGTAGCATGAATATCCGTTTTTGTGTTTAATTATTTTTGGAAATATGTGAATCTATTGTTTTTATTTTGATTTTGGTTGGAAATACGAAGTTCCATGCATATTTCAGGTGAAAATCGCA # Right flank : TCCAGCTATCAACTGATAAAAAGAGCAAAATAGCATGCTTAAAACCGAGGTAGTATGATGTATTCATAAAATTGAATTGTCAGAGGTGTGGATGGTGAAATGGGAAGAAGTTCGAAAATTGTACCCTGACCGTTTTGTAAAACTCCAAATCTTAAAATCCCACATTGAAAATCAGACCAGGTATGTAGAGGATATGGCCGTTATTCAGGCTTTTGACGATGAAAAAGAGGCCACCCGGGAATTGGTCCGGTCGAAGGATGACATCCTCGTTTATCATACGGGCAAAGAAAAAATCGAAGTTCAAATCAAACAAATATTTGGATTCAGAGGACAATATGATCAACATCGTATATAAAGATGGTCTTTTAATCACGTCGATAGAGATTTTATTCCGGGGAAACTCCATCGTGATTGAAAATGTTGTTATTGATACAGGAGCCTCTGAGACGATTCTATCTCCTGATGTGGTCGAAGAAATCGGCATTTTTGCCGAACTGGAC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCTCGCGGGTGCGTGGATTGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.00,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 69804-70171 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIRE01000005.1 Paenibacillus thalictri strain N2SHLJ1 Scaffold4_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 69804 32 100.0 35 ................................ CAGGCAATCGAACTTATAACGATCGACATTATAAA 69871 32 96.9 36 .......T........................ ATCGAGTACATTCAGATGTTTGCCTTCTTTATCTCG 69939 32 96.9 34 .......T........................ GTTGAGGAGGTGAACAAAATGTTGAGTCGCCAGA 70005 32 93.8 34 .......T.........G.............. TACCGATGAGCAGCCCATATGGTCACAATTATGC 70071 32 100.0 37 ................................ AAAGGATCGAATGCAGTAAAACAACTGGCTTAGATAA 70140 32 78.1 0 .....C......AC...G...C.A...A.... | ========== ====== ====== ====== ================================ ===================================== ================== 6 32 94.3 35 GTCGCTCCTTACGTAGGAGCGTGGATTGAAAT # Left flank : TTTACCGGACTCTTCTCGGGTGTTGTTCCGTATGGCCTAGCGTTTGCCGCAGGAGCGATGCTTTTTGTCGTTTACAAGGAGCTGATCCCGGAAAGTCATGGGGACGGAAACGAGAGGGCGTCGACCTTTTCGTTTATTTTTGGGTTGTTGACGATGATCTGCTTGACGCATTTGTTGAGGTAGGGTGGGGGTAAAGTAAATCGGTCAGAAAAGGGGAGCTTCAATCAATTGCTTGGCGCTTGAATACATACCGGCATTGGTGATGTCGAAGTGATCTGGCGGAAGAGAGGCTTCTGCCGCCGCCGATATTGCGAGAGTCGGTTGATAGATTTGGTGCGAACCTGAAGCTCACATGCAAACCCCAAGGGATTCGCACCTTGCTTCTTTTCAGGAACTGTTACATAATTAAATGCATAAACTGGTCGTTTTTGGAAGTATAGTATCGATTCGCACTTTTGGGGCTTGCATGCCTTGATATATAAGGCTTGGAACCACCCGCC # Right flank : TAAATGATATTACGACGGAAGGGCAGACGACCTTGACGATGTCTCTCCTCACGTAAATGCTGTGAGCAATGTTGTCCCAAGGAGGCACTTTATGACACAATTCAATTTAAACGGCATTCCATCTCCTATTTTACTCCAGGGCAATGAACGTATTGCGTATCGCGACCCTGCGGTTATTTACCATGACGGAGTGTTTCGACTCTACTGTACATTGACCGAAACGGAGCCTGACGGAACTGTATATATGTATACGGCGATGTGTGAAAGCCATAATCTGATCCAATGGACCTCACCCAAAAAATTGACACCCAGGGATCGTAGCCTGAACTTCTCCAGTCCGGGAAACATTATCCGTTTTAGGGACAAATGGGTGATGTGTCTTCAGACTTATCCGCGGCCAAACGAAGAGAAATACGGTAACCAGACCTCACGTATTTGGACGATGGAAAGCACTGACCTTGATTGTTGGTCGGCGCCCGAACTGCTTAAGGTAAAGGGGG # Questionable array : NO Score: 8.66 # Score Detail : 1:0, 2:3, 3:3, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTTACGTAGGAGCGTGGATTGAAAT # Alternate repeat : GTCGCTCTTTACGTAGGAGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.50,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 71523-72555 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIRE01000005.1 Paenibacillus thalictri strain N2SHLJ1 Scaffold4_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 71523 32 100.0 34 ................................ CCGATTGATCGGGGCATTTATCGCTAAGGAAAAA 71589 32 100.0 36 ................................ AGCCTTGCAGTCGCAGATAGCGACGCTGGAAATGAC 71657 32 100.0 36 ................................ TTTTGCCGGAGACAGCGGCCGCGTGTCCCAATTGGC 71725 32 100.0 36 ................................ TCGTTGTAAACATGTAGCCACTCTCCCATGGCTACA 71793 32 100.0 34 ................................ AATGAATGGATATCCAAAAGGTATAATTGTGCCC 71859 32 100.0 34 ................................ CAGTCTGCGAAGTAATTTGCAAATCGCCGACAGT 71925 32 100.0 33 ................................ TAGCAGGGCTCAAAAACAATTATTCCGATAACG 71990 32 100.0 36 ................................ TGAATTTGCAGTATCCGAGCCCGGCCAGCGATCGGT 72058 32 96.9 35 .....................C.......... TGTTATATACGTCGGCTTCGGGTGTTGGTAAAAGT 72125 32 100.0 33 ................................ CGCTAGAACGTCCTTGATTTGTGTCAATAGATT 72190 32 100.0 34 ................................ GTTTTCTGAAATCTCAAGGCGCAGTTGATGTTCA 72256 32 100.0 35 ................................ CTGGTACATCTTCAATAGATCGCCCGGAAAATCTT 72323 32 100.0 34 ................................ CGCAAACGACGGGTATTCTTGTTGAAATTGCTTC 72389 32 100.0 35 ................................ AAGCATATGGCAAATAGCGGTACGATGCAAATTAA 72456 32 100.0 35 ................................ TTTTCTGGGGGTTTCAGTCAGCACTCTTAAGAGAT 72523 31 81.2 0 ...............A........-..CCCG. | CC [72545] ========== ====== ====== ====== ================================ ==================================== ================== 16 32 98.6 35 GTCGCTCCTCACGTAGGAGCGTGGATTGAAAT # Left flank : ACAAGTACAGGGCATCGAGAAGTTCCTGATGTTTTTCCACGGAAGCGGCCCGGAAGATGAGCATGTTATATTTGATACACATGCTTGCATCGGCTTAGCATGGAGCGACGATCTTCGCGAGTGGAGTTGGCCGAAATGACGATAACAAATCGATGCATAGCGTCCGTATGCATTGTGAGCTAGTTGAATCTTAAGGTGACGGAAGGCTGTCCTGGCTGTCCGGTATTTTCGAACCTATCTTGATCATGGTACCGGAAATTAGTCTCCGCGAATTCCAGTTGAGGCGTATGTTTTGGATGACATGGTAACAATTCCCATAACAATGCCGTGAAGTGCGAACCCCAAGCTCACATGAATTTTCTGGGAGATTCGCACCAAGCGTCATATGTGGAAATCTGCCTGTTTGTTCGGGTAAAATGAGATAAGATTAGGACCTTTTTATCCGGTTCGCACTTTTGAGGCTCGCAAGCCTTACGCAGCAAGGCCTGCCGAGACTCGCT # Right flank : TTTTCCCGGATGTCGTTTGATGTAAATTTCTGGAAGTACCCCCTCCTGTTTGACTCCCCATTCCCAGGACAACTCAGGAAACAGCACATACTCGAACAATTCTCCGAGCATAGCAGACCTCATACAACTGGCCTATAAAAAAACTACGACTGACCAATTAACTAACAAGGATTTCCATATGCCTCTGTCGAAGTAGTAACTACCCACTTTGATGGAGGTTTCTTTTTTATGCCACTGCCGAAAAATCGAATTGTTCCAAAAGATAAGATGTACTTCAGACCCGAGTTTGAACATTGCCTGCACTGTGGTGCAAAACTAAAGAGAAGCCATACAGCTTGGAAAAAGAACATCTCTACTCTCCACGGAGTTATCCAGGCTTGGAGCATGGCTTATGTCTGTTCCAATGTAAATTGCGAATTTCCCAACACCTATTACAAGTCCGCAGAAGCGGATCTGCTCGCTATGAAACATACTTCTTACGGTTTCGACGTGCTCGCCCT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCACGTAGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : NA //