Array 1 32132-32888 **** Predicted by CRISPRDetect 2.4 *** >NZ_JIBU02000014.1 Clostridium drakei strain SL1 contig_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 32132 30 100.0 36 .............................. TATATCTTTGCACATTTCATTTATTTAACACTTACT 32198 30 100.0 35 .............................. GAGTCCAAGCAGAGGACCAATTCAAACGGATATAA 32263 30 100.0 37 .............................. ACTAAGTAAAATGCCCTTTGTTCTATATCCTCTTTAA 32330 30 100.0 36 .............................. TAATATTTTTACATTACCATATGTGTTGGTAATTTC 32396 30 100.0 36 .............................. AAAGAGCCATATTATTCTCCCATGTATTCGCAAAAT 32462 30 100.0 36 .............................. CCAGTTGCCGATTTTTTACCTGTATATATTGCATTT 32528 30 100.0 36 .............................. GAATAATGCATAGCTTTAGTTAGCTTTTTAGTACTA 32594 30 100.0 36 .............................. GAAAAGGAGAGATGTTCTTCAGTATCTCTCCTAAAT 32660 30 96.7 36 ....................A......... GGCAATATTATTAATAAGACAAGGTATTACTTACTT 32726 30 96.7 37 ............T................. TTGAAGTTCCCCTCCTGAAAATTGGTGAAGGTACTGC 32793 30 100.0 36 .............................. AAATATGCGTAATGTGAAAATTTATTTTCTCCACTT 32859 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 99.5 36 GTTGAACTATAACATAAGATGTATTTAAAT # Left flank : CTAACAAGATATTTACCTAGAAAAATAAGTTGGAGATGCATTTAAAATGAATATAGATGAAATTAGAAGATTACATTATAAACAAGAGTGAAAAGAAGATGGGGTTGCAGAAGCAATAGAACAATCTAGATTAAAAAATGTTGAAATGGTTATAAAATTACTAAATAAAAAATTTAAAAATGTAGATGGAGATGTAATAGAAAAGATAAAAGTATTAAATAGTGACATTCTAAATTTAATTATAGAAGATATACTGGATATAGAAAGTATAGAAGATTTAAAAAAGTATGGGATTAAATCTTTTTAAAATTTGATAAATATGATTTACCAGCCATAAGAAAAACCAAAGTGCCTTTAAAGTCTTGAGAAATAAGGCTTAGAGGTACTTTTTATATTGCATTTTTAAAAATCAAAAAACGGCTGGTAAAATTTTAAGAAAACTCTTTATTTTCAATGGGTTAAGAGGTATAATAAAAAATAAGAATGGCTATTTTACAGTG # Right flank : TTTATTAATAGAATTTTTTAGAATACTTATTTTTAATTGAAGATCCAGAGTTAGAAAAGAAATATGAGGAATATAAAAAAGAAATTGGAGGTGCATTTAAAATGAGTATAGATGAAATTAGAAGATTACATTATAAACAAGAGGGAAAAGAAGAAGGAAGAGAAGAGGGGATTGCAGAAGCAATAGAACAATCTAGATTAAAAAATGTTGAAATGGTCATAAAATTACTAAATAAAAAATTTAAAAATGTAGATGGAGATGTAATAGAAAGGATAAAAGTATTAAGTAGTGACAGTCTAAATTTAATTATAGAAGATATACTGGATATAGAAAGTATAGAAGATTTAAAAAAAGTATGGGATTAAATCCTGTTAAAATTAAAATCTGATAAATATAATTTACCAGCCATAAGAAAAACCAAAGTGCCTTTAAAGGATTGAAATATAAGGATTAGAGGCACTTTTTACATTGTATTTTTAAAACTCCAAAAACGGCTGGTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTATAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 33462-34084 **** Predicted by CRISPRDetect 2.4 *** >NZ_JIBU02000014.1 Clostridium drakei strain SL1 contig_14, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 33462 30 100.0 36 .............................. TTATCTTTATTATAAAATATAATAGATTTTTCTGTT 33528 30 100.0 36 .............................. TATATTTTGTACGGTGTATAGTCTGGAATATCTTCT 33594 30 100.0 36 .............................. TTCATTGGTATATTTAGTTCATTATCTAATGGATTA 33660 30 100.0 36 .............................. TACATTACTGCTGTTCTTAATGCTTTTTCACTATAT 33726 30 100.0 36 .............................. TGCATATGTATAAGTTGAGCTTCTTGTAAACAAATA 33792 30 100.0 36 .............................. TAAAGTGAAAGGGAGGAATAATAAATGAATGGAAAA 33858 30 100.0 36 .............................. TTGCAAGTCCTATTATCAAATTACGATTTTCTGGAG 33924 30 100.0 35 .............................. AAAACAAGTAAGTTGCTATTGCTTTGACATAGTAA 33989 30 100.0 36 .............................. AGAAAATGAGTTATTAAATGAAGGGGTACAAAATTT 34055 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 10 30 100.0 36 GTTGAACTATAACATAGGATGTATTTAAAT # Left flank : AAAAAAGAAATTGGAGGTGCATTTAAAATGAGTATAGATGAAATTAGAAGATTACATTATAAACAAGAGGGAAAAGAAGAAGGAAGAGAAGAGGGGATTGCAGAAGCAATAGAACAATCTAGATTAAAAAATGTTGAAATGGTCATAAAATTACTAAATAAAAAATTTAAAAATGTAGATGGAGATGTAATAGAAAGGATAAAAGTATTAAGTAGTGACAGTCTAAATTTAATTATAGAAGATATACTGGATATAGAAAGTATAGAAGATTTAAAAAAAGTATGGGATTAAATCCTGTTAAAATTAAAATCTGATAAATATAATTTACCAGCCATAAGAAAAACCAAAGTGCCTTTAAAGGATTGAAATATAAGGATTAGAGGCACTTTTTACATTGTATTTTTAAAACTCCAAAAACGGCTGGTAAAATTTCAAGAAAACTCTTTATTTTCAATGGGTTAAGAGGTATAATAAAAAATAAGAATGGCTATTTTACAGTG # Right flank : TAAAGTTAACCATAACAAGATTTTTTATATAGTATATTTAACAAAGCATAGATCAAGCTAAGCGAAACAGTAACTTTGAATTGAACTTAATTACTATAAAATTATAATCTGAGAATTAGCTAGATTTATTCCATTGCTGCCATTGCTAATATCTACACCTTCTTTATATGGAGCTCTTTCATCTATTGTTCAAGGAGTAAGTGATCTTGGTTTTGTACTTAACTTGGATAAGCTTTTCTAAGACTCAGATGTGTTAAATGTCTAGATGAGATTTAACCAGCTTGCTTAGGTAAGAAGTATTACTCATAAGCAAACTTCAGCTGAGTATAGGAATCACTTAATTTCTTTTATTTCAATCTGTAATTATTTTCCTTACCACTTATTGCTACAATGAAATTTTTGTACATTTCCAAAATTCTACTTCCTATACATTTTTTTGTAGCTTCGTTATAAACCTTGTAGTTTCCAAAGATAAGTTTATTTCTTCGTGTTTCTATGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTATAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 102570-102796 **** Predicted by CRISPRDetect 2.4 *** >NZ_JIBU02000018.1 Clostridium drakei strain SL1 contig_18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 102570 30 100.0 36 .............................. TAACAATCCCTCCGAATATTTTATCATTGAGAATTG 102636 30 100.0 35 .............................. GACAGTGGAAATGTAAACTACGCTGGCGCTAGAGA 102701 30 96.7 36 ................T............. ATAGCTAAAATAAATGGATGGAAATTAAGTTTTAAC 102767 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 99.2 36 GTTGAACTTTAACATAGGATGTATTTAAAT # Left flank : TAAGTGTCTTAGCAGCATTATACGCTGCATGTTTAAGTCCTAATTTAAGAACTACATGTACCACCTTATCATCTGTAATAAACAGTGTTTCAACAATATTTATGGTTATATTCATTGATCCTTATTTATCTATGACAACAGATGATGTAATAAGAGGAGATTGTACGGAATTAGAGTTTAACCGTTGTGTAATTTTTATTATTGTTGGACTTATCGTTGGAAGTATATTAGCACAATTCATGCTAATTCCTGCTTCAAAATTAATAGTAATTATTGCAAAACTAATATAAATCAAATGAGTATACTTGAAAGCAACTGGAAATTTTACCAGCTGAAACTAAAAGTAAATTGCCTTTAAATGATTGAAATGTAAGGCTTAAAGGTACTTTTTGCATCGGATTTTTAAAAACGAAAAAACGGCTGGTAGAATTTCAATGAAAGTCTTTATTTGCAATGTATTAAGGGGTATAATGGAAAAGAAGAATGGCTGGGTTACAGTG # Right flank : TAGGATATGCCCTGCAGTATATCCATAACGGCGGTTAAGTTGAACTTTAATAATTAACTGTTATTATTTGGAACAACAGCTATTTAATTATAAGATGAAATGCTTAAATATTATTCTATCTATAAATGACATATTATTAATTTACTGACTAATATATTGTATATATAAATAGTAAATATCCATTATTATAAGTTTTTTATAAAAGCTATGTATTTAGGAGATTATATCCGGCTATACATAGTTTCTTTATGTTTTTCAGATTAAAAGTTGCATATTGATAAGTTATACAATTGAAACAAATATTTGAAAATGGTATAATTTTATACAATATATGGAGTGTATTGTAGTATAATAGCTAAAAAGGAGGATAAATTATTGGATTGTAATAAATTAATATATGCATTTGCTAAGTATTTGAAGAATATTGATGAAGAAAGATATAATAAATTATTGGATATATTTTTTATTGAGAATAATGATGATATAGAAAAAGCATATAT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 114532-115291 **** Predicted by CRISPRDetect 2.4 *** >NZ_JIBU02000018.1 Clostridium drakei strain SL1 contig_18, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 114532 30 100.0 37 .............................. ATATTTTCTTGAACTGCATTAACTAAATCCTGGTCAG 114599 30 100.0 37 .............................. GAAATAACAAAAGTTGAAGGTGAAACACTTAATAAAT 114666 30 100.0 36 .............................. TTATATTTAGACTGTATTGTTTTTATTTCCTCATTA 114732 30 100.0 35 .............................. TTGCGATGTAGCTCTATATTTGAAAAGACTATTTT 114797 30 100.0 35 .............................. ACTTAACTTTCTAAAATATCTTTTAAAACTAATCC 114862 30 100.0 34 .............................. CATACACAGTAATAGCACTTGCCATGTTTATTAT 114926 30 100.0 36 .............................. TAATTTTACTAATACTAAAGTAACGTTTAAAGATGC 114992 30 100.0 37 .............................. GCTGCTGCTTCTTGAACAGTTTTAGTTTGTGCCATAG 115059 30 100.0 36 .............................. AACAATTTTAATTGCTGGTATGTTTCCTTTTTCTCT 115125 30 100.0 37 .............................. GATGTAAATGGTTCATATCAAATAATAAAAAAAGTAA 115192 30 100.0 37 .............................. GCTTGTCCTACATAATAAGTTGCATTATTAAGTGCTA 115259 30 90.0 0 ................T........G...A | ACA [115283] ========== ====== ====== ====== ============================== ===================================== ================== 12 30 99.2 36 GTTGAACTTTAACATAGGATGTATTTAAAT # Left flank : CAGGACAAGCAAGAGTTTGGTTAGATCGTACTTTCCCAATGGTTGGGGAAAACTTTGCACCAAGACACTCTGGTAAAAAGGCAATAACAATATTTGCTCAAGGTAATCCAAATCCACAAATAGCTGAAGAAGGAATTAAATTTGTTACTAACATTTTTGAAACATATGGTTGGAAAATAGAGGATAGTATTCATTACTGTGGAACTAGCTCTAATCCTGATTTAGAAAAGTTTGAAGAGTTATCTTTAAGAGCTTTTAAAGATGGGGAAAATTTAGTTGGGTAAATTAAGCTTGACAAATTACTAGTATATTTTAATAAGAATTTTACCAGCTGAATTTAGAAACAAAGTACCTTTAAAGCTTTGAAACATAAGGCTTAAGGGTGCTTTTTTTATTTGAATTTTCAAAAACGAAAAACGGCTGGTAAAATTTTAAGAAAATCCTTTATTTTCAATGGATTAAGAGTTATAATAAAAAATAAGAATGGCTATTTTACAGTG # Right flank : AACGTATTAAGCAATTTGAACAGAGGATTATATTATTAATTTTACTCCACTAAAATCGTTTAATAATTTTTTAGCAATCAAAAGGTCTTTCATTAATTTTTTTAGTGAGAAAGACCTTTTTACTTGATAAGTGTTACCATATTAGAAAATTATTCTGTTAAATTTATCATTTTCTTAAGTGATGTTACATATTATAAGGAAAGATATATATAATAATATTAATAATTTGAATTTTAATAATTTTCTATTGTTTATATTGACACAGGATGGAAAAAATGATAATGTATAAAACAAAATACAGTAATTAGCTATGATGAGGAAGAGTAATTACAGATTTGAAATAAAGAGAGGAAATGATGGTGAGAATTTTCCGTGATAGATGTGATGAAGGTAGCCTTGGAGCTTTAAACCGAAAGTATTATATGAGTAGGCTTTAATGGAGTTCCCACCATTAAAAGGGAAGTAGTATCGGTAGAGTTTACCCGTACTATAATGAGCGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 3 118523-118753 **** Predicted by CRISPRDetect 2.4 *** >NZ_JIBU02000018.1 Clostridium drakei strain SL1 contig_18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 118523 31 100.0 35 ............................... CTAGTACTACCACTTTTTAAGAGCAAATCTGTTGA 118589 31 100.0 35 ............................... GAAAATCACGTTTTGTAGAAGGATCTGAGTCTATA 118655 31 96.8 35 ..............................T AGCAAATATAGCTAAATTTTCCTGACCTGATAAAA 118721 31 100.0 0 ............................... | GC [118747] ========== ====== ====== ====== =============================== =================================== ================== 4 31 99.2 35 GTTGAACTTTAACATATGATGTATTTAAATA # Left flank : TGAAAACTGCATTTCAATTCATAAAATGCAGTGGAGCATGAAATTTGATAATAATGATGAAAATATTTTGCAGTTTGGTGAAAATGTTAAAAAAATTATAGGTGAAGTAAGGCGCTATAAATCTGAAAGAAATTTGTCTTTAAAAGAAAAAATAAATATATTGAAAATTTCCATTCCAAAGAGTTATGAAGAGTATATTACACAGACATTAAAAGATATAAAAGCATGCACATGGGCTGAAGATATTGAAGTAAAATTTAGTGACAAGTATGATGTTGAAATACTATAGAATTTTAGGTTAGACAATGCAGGAAAATTTCAATTTTACCATCCGTATTAAAAAATAAAATGCCTTTAAATCATTGAAACATAAAGCCTAGAGGTGATTTTTTTGGTATAGTTTTAAAAATTAAAAAACGGCTGGTAAAATTTTAAGAAAATCCTTTAATTTCAATGGACTAAGAGGTATAATGAAAAATGAGAATGGCTATTTTACAGTG # Right flank : ATCAGGTGAGTAAATACTATATAAACTTACCAGCTATAGGAAAAGAAAAAGTGCTTTTAAACCTTTGAAATATAAGCTTTAAGGGTGCTTTTTTATTGAGATTTTAAGAAATCAAAATTAGGTGTAATAACATTACAAATATGATATAATTTTCACATGCTTAAGTCGGAAATGTAACAAATAGTAATTGTGCGCCCAGCAAAGGGTAATTAACCTAGCAGGTGGAAATCCTGTCCGAGCAAGGTCTAGCCAATCGGCGGTAGCGAGTCTTGAGTTGTCATCAGCAATGATGGGAGCTAAGCGTAGACAGCGAGAAAGTAGGGTTGAAATGCTATTGAGCTCCGAAATTTTGTACATTCAGATGGTTGACGTGTTAATTACTGCGGAAAACAATATCACATAGGTCACAATGGCAAGAACTATGTGGCACTGCGGGGTCAAAGGGCCAATCATGCTTTACACTGTGGTTAATTATCAACTGGGGAGAGCCTGTCGTTTCT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACATATGATGTATTTAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 828-1120 **** Predicted by CRISPRDetect 2.4 *** >NZ_JIBU02000010.1 Clostridium drakei strain SL1 contig_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 828 30 100.0 34 .............................. ACTATTATTTTATTGAACTCTGGAATCCATTTAT 892 30 100.0 36 .............................. TCTATTACTTCAGTTATTGTGTAAGTCTTGCAGAAA 958 30 100.0 37 .............................. GAACCGAAATTGAAAGGCTTAAAGCACAAATTAGAGA 1025 30 100.0 36 .............................. TTAGCTTTAGCTTGGAAAGCTATTATTGTTAATACT 1091 30 76.7 0 A...............T.GCA....A...A | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 95.3 36 GTTGAACTTTAACATAGGATGTATTTAAAT # Left flank : GATATAGGAAAAAATGGTATAATAATTGAGTTTAAAAAAGTTAATAAAAGAAGAAAAGAAACTTTAAATACAGCAGCAGAAAATGCATTAGCTCAAATAAAAACTATGAATTATAGACAAGAACTTATTGAACTTAGAGTGAAAAATATAATAGAACTTGGAATTGCTTTTGAAGGAAAAGATGTTTTTGTTTTAAAATCAAGTGATTCTTAGAAGAACTTATTCAGGTGCGTAACAGTGCTTATTCACCACTTGAAGAAGATGGGGTATTAGAAATGGTAGTGATCAGATAAAGTGCAATTTTACTTGGGTTAACTATGAATTTTACCAGCTGAAGTTAAAAATAAAGTGCCTTTAAAGCCTTGTAATATAAGAATTAAAGGCACTTTTTTTATCTGAATTTTCAAAAGTAAAAAATGGCTGGTAAAATTTTAAGAAAATCCTTTAATTTCAATGGATTAAGAAGTATAATAAAAAATGAGAATGGCTATTTTACAGTG # Right flank : ATAAATGCTATTGCTTTAAATTAGCAGTAGCATTTATTTTTATGAATGTTTAAATAGCATTGTTTGTGTTAAAATAATTGTTAAGGAAGGAAGTGGTTAAGTGAAAAAGATTCCTATAGGTATAACTGATTTTAAGGAAATTATAAATAATAATTACTATCTTGTAGATAAGAGTTTGTTTATAAAAGAGATAATGGAAGATGGATCAAAAGTTTTATTATTGCCAAGACCAAGACGTTTTGGGAAGACCATAAATATGAGCATGCTTAAGTATTTCTTTGAAAAGACTGATGAAGATAATAGTTTTCTTTTTGAGAAATTGAATATATATGAACATAAAGATATTATGGGAAAGCAAGGAATATATCCTGTTATTTATATAACTTTTAAAGATTTAAAGGATAAAAATATTGATAAATGTTATGAAAAAATAAAAGAAATTTTAATTGAGCAATATGATAAATTTCAATTTATATTGGATACTTTAAGTGAAGTAGATA # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //