Array 1 586379-587743 **** Predicted by CRISPRDetect 2.4 *** >NC_009253.1 Desulfotomaculum reducens MI-1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 586379 30 100.0 37 .............................. CCGTATTTTTAGGAAGCAGGGATCAAAGCACAAAAGA 586446 30 100.0 38 .............................. TCCCTATCCTTGGCAGTATCGTTTTCTGGAGGTACTGT 586514 30 100.0 35 .............................. ATTGTTTCAAGGCTTGGTTGCAATTTTCCGGTTTC 586579 30 100.0 39 .............................. ACAATTACGAAAACGTATTAGTTACCGAGGAAAATATTG 586648 30 100.0 36 .............................. AATATCAAGATGCTTTAAAACTAGGCGTTAAATTTG 586714 30 100.0 37 .............................. GTTTTTTGTTCCAATTGTGCCCCAAAACTTGGGGCAC 586781 30 100.0 37 .............................. CACCATGCCGGGGCTAGGTTTACAAAGATTAGCATAC 586848 30 100.0 38 .............................. ATTTACCAATAAATGTATATTATATAATTTGAATATAG 586916 30 100.0 36 .............................. ATTTGAGTCTGCTGCACTCAATTTTCGGAGGGTATA 586982 30 100.0 37 .............................. CTACATAATATATAAATTATGTAGCGAGTTATCAGCC 587049 30 100.0 36 .............................. GTTTTTTGTTCCAATTGTGCCCCAAAACTTGGGGCA 587115 30 100.0 35 .............................. CAAAAGATAAAAATAATAGTATCATTTAATCAGGG 587180 30 100.0 37 .............................. ATGCCCGTCCGGTAGAAGAACCAGCAGGCAAACATCC 587247 30 100.0 38 .............................. ATACTTTTATGCAGTCGATGTTTTCTTCGGTGACACGG 587315 30 100.0 40 .............................. ATAATATTAGGGATTGCAATATACAAGTTTGGTCTTCTCC 587385 30 100.0 37 .............................. TTGTGCCTACCCTGTTATGTAGAGTAAGCACTAAAAA 587452 30 100.0 35 .............................. CTATTTTTTGGTTGGTGTTTGTCATTGTTATGCAC 587517 30 100.0 36 .............................. GTAATATTGCATACGAATTTCTTCATGGTATCATCC 587583 30 100.0 36 .............................. GAAATATCCAAAAAGCTTTAGAAAAACGGCTAGAGA 587649 30 100.0 35 .............................. TTGGCAAGTACGCTTTAAATTCCGGTGAGAAGATC 587714 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 21 30 100.0 37 GTTATCAGCCTACCTATAAGGAATTGAAAC # Left flank : GTAAAGGAGCTGCTTAGGGGTAAAGAACGATTGCAGATAGATTTTTTGGTGTTGGAACAAGATGCAGAGTTGAGGGATGAAATGCAGATAGTGGGCCGTATAAAGGACAGGTGGGAAAGAAGGGAAGCGTGGAGAAAACTGTCCGGCAGAATTGCCCTTGTTTCAGTTAGTATTTTTGCCCAACCAGGTTTCCACCCAGAACAAATAGCAGATGAATTCATGGGGAGTTGGTGGGTGGTTCGGGAGGGTTATTATAACAGTAAACAGGGATTATTGATTGAGGGAGAAACAATGATTTTATAGAGTTTCCGGTGTTAGTAATGAAGGCTAAAAAAGTCGTCGATCTCCGGTGGCGTAATAACTCCGGGGGATCGACGACAATGGCAAAACACATAGATGCTTATAACATGCGGGGTGCGGGGTTTTACCCTTACTCCCCGGTGGTGGTTAAATAAAAGGTCTGTCAAACGGCAGGCCGCATATTTACTGAATTTTGACGG # Right flank : CATTGCTAACTTAGGGACCCTAGAGACAATAAAACGATAGAATACCCACAAAAATCTTTATTAAATCCCGGAGGTGAAAAGTTTGGAATATGTGATGGTTCCTGTTACCGGAACGCTTATTTGGTACTATTACATTTGCCAGCGGGAGGTTTGGTTAATTGGCCATCAAATTACACCGGACCAAAGTGATTCTAATATATCCCTGGGAAGGTATATTCACGAAAACTCATACGACAGAGAAAGAAAAGAACTTGTCATTGGCCATAGTAAAATGGATGTATTCCGAGTTAGTAACGGGGAACTAGTTGTAGGAGAGGTTAAAAAAAGCTCAAAGTATAGTCAGAGTGCCCGTATGCAACTTGCTTTTTATCTAATGGAATTACAAGACCGTGGGATTAAGGCCAGGGGGGAACTTCGCTTTCCCCAGGAGAAAAAGCTAGAAGAAGTTGTTTTGGATGAAAATATCCTGGAAGAACTGGGGAGGGCTTCCCAAGCGATTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATCAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA // Array 2 1079904-1083390 **** Predicted by CRISPRDetect 2.4 *** >NC_009253.1 Desulfotomaculum reducens MI-1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 1079904 32 100.0 35 ................................ GCATTAATTACCCCCCTTTGTCCAAACTGTGATAC 1079971 32 100.0 34 ................................ AATAATAGCCCTGGTTACCTAGAAGCAATAAGGC 1080037 32 100.0 34 ................................ ACCGCCTCATTGTCAGTGGTTATTATGCAATGTA 1080103 32 100.0 33 ................................ GTTAATGGCATGGTTCTATGCTGGCCTACAGGG 1080168 32 100.0 34 ................................ AGAAGATAATTTGTTCAATATGCTTGCTGATAAA 1080234 32 100.0 33 ................................ TATCTATAGAATTTTTAATATGTTCTTTTAACT 1080299 32 100.0 34 ................................ ATTTAGTAAACCATTTTCAAGAATATATAAAGCA 1080365 32 100.0 35 ................................ ACTTTGGATTGCTTTGAATTGCTAGGTTTTTTGAA 1080432 32 100.0 33 ................................ TCCATTGTTCTATTTCTGTATCCTGGAAAATTT 1080497 32 100.0 33 ................................ TCCATTGTTCTATTTCTGTATCCTGGAAAATTT 1080562 32 100.0 33 ................................ AGTAAACACTAAGACAAACAAAGTATATTATAT 1080627 32 100.0 34 ................................ ACATACAATCACACCACAGACAAATTTAAAACGC 1080693 32 100.0 35 ................................ TGCGGCAAGAAGTGCCTTTTCAACTGCATTATCAA 1080760 32 100.0 34 ................................ GGAAAGAGGGCATTAATGAGCCGGTCGAAGTCCC 1080826 32 100.0 34 ................................ GTTAATGAACCTGAACTCGAAAATTGGGACGGTA 1080892 32 100.0 33 ................................ AAAAATTACCGGACAGACAACAGATTAAATACG 1080957 32 100.0 36 ................................ TGAAGTTGATGCGTTATCAAGTTGCTGCTTTGATAA 1081025 32 100.0 38 ................................ TAGCTCCGTTCATGTCGTACCATTTATTGTTGTGGTAT 1081095 32 100.0 37 ................................ TAGCTACAATTTTAAGCATCATCTTCCTGTGTTCAAT 1081164 32 100.0 33 ................................ TCATTGATGCCGTCACCTCTGACATAATGCAAC 1081229 32 100.0 33 ................................ TGAGAAAAAAGGTTACCTTAAAAAAATGATACC 1081294 32 100.0 36 ................................ TGTACTTCGGCAGGGCATACATTACCCCTTCCTCTG 1081362 32 100.0 34 ................................ ATTTTTGTAGCGACAATAATAATCAATTATCAGA 1081428 32 100.0 37 ................................ ATACCGGCCCTGGGTGTCAGGAGAAGCGGGAAGAGAT 1081497 32 100.0 33 ................................ AATGGTACTGCTACTATTTGGTAGGTAGCACTC 1081562 32 100.0 33 ................................ AATAATTGCTATGCCTGAGTAAATTCCATGTAC 1081627 32 100.0 35 ................................ TTCGTAACCAGACCGGGCATATCCGGTCTGGTTAA 1081694 32 100.0 36 ................................ TGCTTGTGACATTGTTCTTATCCTCCGTAGTTCGTC 1081762 32 100.0 34 ................................ ATTTTGTTCTTTTGTTGTAATCTCCTGTACTTTT 1081828 32 100.0 34 ................................ TTTTTCCAAACGCTTTAATTCTACTTCCGCCTCC 1081894 32 100.0 35 ................................ ATTGCACTTTGATATGGTTCTGTAGAATCTTTCAT 1081961 32 100.0 33 ................................ ATCTAAAAGTGATTGTTACTATATTTTATCTGC 1082026 32 100.0 35 ................................ AAATTTTACTATATCACCTTTAAATTCTCCTGTGC 1082093 32 100.0 35 ................................ TGAAGAAGATGGATTATGTGTGATTAGACAAGATA 1082160 32 100.0 35 ................................ CATGTGAAATACATTATGGACTTACATATGAAGAT 1082227 32 100.0 34 ................................ CGAAAGAGCATTGGAAATACATTGAATTAGGGTA 1082293 32 100.0 35 ................................ ACGTAACTAAAGTTTTTACCATACCATTATTTCAC 1082360 32 100.0 35 ................................ TGATTCGCTCAATACATGACATAACTGCACATGAC 1082427 32 100.0 37 ................................ AATTAGATCCGGAGGAAATACCGCAAAGTGCGCACCC 1082496 32 100.0 33 ................................ AGCTTTCATTAAATCTTTAATACTAGGCTCTAT 1082561 32 100.0 33 ................................ ATATTCGGTTTGATCTAGTTCTGTTGCTATGTC 1082626 32 96.9 35 ........A....................... CTCGAAAAAGTCTTAATTCTACGGTGTTGCGATTG 1082693 32 100.0 34 ................................ ATCGACTTCAAGCTCAACGCCTAAAAATATATTT 1082759 32 100.0 35 ................................ ATTGTCATAGCATAATTCATTGCAGTGACTACATG 1082826 32 100.0 34 ................................ TTATCTGTGAATACTGTCAAGAAATTACTTTAGT 1082892 32 100.0 38 ................................ TTCTTCCAACAGGATATTATTCCATTGCTTATCTTTAG 1082962 32 100.0 36 ................................ ATTATGTACTATAGTAATTTGCCCTCTTTGGCTCCC 1083030 32 100.0 34 ................................ ACTATAACAGATAACAGTCATAACCTACATAACA 1083096 32 100.0 34 ................................ CCTAGACTGCAATACTATACATACCACTTGACAG 1083162 32 100.0 32 ................................ TGATTACTATTATCAACGAGTAAAAAATTTAC 1083226 32 100.0 35 ................................ GGTGATGGTGCTATCTTCGTTTGTGACTATGTGAT 1083293 32 100.0 34 ................................ ATATTCGCCCGCGATACCGGCCCCTTTCACTGTA 1083359 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 53 32 99.9 34 GTCGCCCCTCACGCAGGGGCGTGGATTGAAAC # Left flank : CTCCGTTTGTATGGAAGTAAGAAGGAGACTTACAAATATTATGATGATGTTGATTACTTATGATGTAAATACTACAACCGATGCAGGTAAAAAAAGGCTGCGTCGAGTTGCCAAACAGTGTATTAATTATGGCCAACGAGTGCAAAACTCTGTATTTGAGTGCTTATTAGATCCAGCGCAGTTTGCAGAATTGAAAAATACTCTTGAAGAAATAATTGATAAGGAAAAAGATAGTCTTAGGTACTATTATCTTGGTAGTAACTGGAAAAAAAGGATTAAACACGTTGGTGCTAAAGAGATTTTTGACCCTGAAGGGACTATGATAATCTAAAGTGCGAATTCTAAGTAAACATGAAAAACTAGGTGTATCGCAAGTCCTAGTTTATAAGGGATTGTACACAAAACTGCCGTAAGATTAAGGGTAAAAAAAACAAGATAAATGTAGGTTCGCGAAAACAGGTATTTTAACCCTTAATAAATAAGGTTTTACGGCGAATGCT # Right flank : CGAAATACCAGGTACATTAGACTGCAAGTCAAACTGTCGCCCCTCACTGTCAATTCTCAAATTAAATCATCCAGGATTCTTAAATTAAAAACTCTCTGTTTTATATAGTCCTATCAAAAATTATTAAATTGTAATGGCAATAATTAGTCTGTTTATCAAATTAAAATAGATTCGTTCCTCTAGGAATATAAAAAACGCCGGGATGATAAAACCACCACAGCGTCTCCAAAGATTGAGTCTGTTCAAATATTAAGTTCATTTTGGGCCTGGTAAACTACCTCTTCATCAATTTGCCTTAACTTTTTGTAATAAGCGTAAAGCAGACAATTAGTAACTAAATTGTTAATTAACCGTGGTAAGCCTTTTGTTGTGGCATAGATAGCGTCAATTGCTGAATCGGTGAAAATCTCTTCGATTAACCCTGCTTGCTTTAATCGGCTGGTGCAATAATCTCTAATTTCTTCAGGTTTTAACCCCTGCATAATATGTTTCACTACCAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCACGCAGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCTCGCGCAGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.90,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.15,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 1764821-1766001 **** Predicted by CRISPRDetect 2.4 *** >NC_009253.1 Desulfotomaculum reducens MI-1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 1764821 37 100.0 39 ..................................... AACAAGTCTAATACCAGTAGCGAGTATCCATTCTTCCTC 1764897 37 100.0 38 ..................................... AAAATATACATAAGTAAATTGGCTGTGGTTAGTTCTTC 1764972 37 100.0 40 ..................................... TGAAATATGGATTCAATCTTTAGAAGGTGGCACTATATCC 1765049 37 100.0 38 ..................................... AGCTGCACTGTTATAAGATTCACTGATTGTAGCTGATT 1765124 37 100.0 39 ..................................... GTATGCTTCTTTATATTCTTAATAACTGTAAATGGTCTA 1765200 37 100.0 39 ..................................... GCATTATTATATTTGCTTGTTTCTTCCGTTAACCACTTT 1765276 37 100.0 38 ..................................... ACAAATAAAAAAGGTCAGATGACTTCTGTTACATTAAC 1765351 37 100.0 37 ..................................... TGAAAGTGTCAGTATGCATATTCAAGCAATTCAAAAA 1765425 37 100.0 42 ..................................... ATTTTAAAATTATTCATTTTTACCTCCTATTCTGTGACTGGT 1765504 37 100.0 45 ..................................... GGTATCCACCTTCGGCAGGTGAAACAAAAAAGTGGGCAAGGCCCA 1765586 37 100.0 40 ..................................... GTATAGCAGAAGTTGGAGTATTACAGCCGATACTGGTAAA 1765663 37 100.0 39 ..................................... TTGAGGAATGATGGCAGTAACACTGCTTTCTATGCCTGC 1765739 37 100.0 38 ..................................... TCCTTACCCCTTTAGCAGATATACAGTCATCTTCTTCA 1765814 37 100.0 37 ..................................... ATTACACTATTCTACCTATGTAATTAATTTCCTTTAC 1765888 37 100.0 40 ..................................... TATATTCAACACACCATCCTTTTACCTATCTCGGCAATAT 1765965 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================= ================== 16 37 100.0 39 GTCAAAACACAAAATAATTCCCTTTGGGAATTGAAAC # Left flank : TACCCAAATATGATATCACTGATCAAAAAAAGATGGGTCTTATTAACTGTACCCTAAAATCTAGCTTTTTATTGGAGTATACAGCAGTGATAACGCTTTCCGAGTGATTAGGCACTCGGGCAACATAGCAGCTCAAGCGGTATAACCAAAAATTGGTTATTTTGGAGCTTTAACTTCAAAGGTAAGGAGGTATTTTTTTAAAAACTTCCTGAGTATATCAAATGAAGATGACAGAAGTATAATTGGTGAAATAGAGTACCAAAATGATATAATAAAATAAGGGTAAGTAAATATAATTGTGAATATTCAGATATCACCGATCTGTTGGTGTGTAATATACCAGGGACTTCTGCGATTTCTAAAATCCCTTGGCATCTAAAGGTTAGGGACTTTACTAGAGGCAGGATTTTGTGTAAGATAGGAAAAACCAACCAATTTTAAAGTAATGCTCGCAAAATGTATTTTCATCCTAGGTGTAGTAAGGGATAAAAAGCGCAGGA # Right flank : CATTTGAAATTTTACTATAAACATAATATACCTCCTCGTATAATAGTAATAGATTCACTGGACAAACCTAATTTCCATAAATGGAATAAGGTGGAGTCCATGTATGAGAACCGGTTCTCGATAACGGGTATCGAGACCAGCTAAAATGATAACCAATTCCACACTGGGTGCAATAATGGTACCAGTCAGTCGCGCGGCTATTGTTTATGTGGATAAGGTCATTGTCTAAACTGAGTCTAAGTACCCTAAATATGGTGGTGATGTTTAGAAAACATACAAGATTATCCACAGTCAATCCCTGATCAGGGAGAGTAGATACTAATAACTACAGCTCCATAATTTAAGATATTGTGATTCTTAATGCCGGCCCCCTGGAGATTTCTTTTGAGGTTTCCTGACCGGGTCGGTTTTCTATTGCCTTTTTTACACTTCCAATTATTGTCTGGCAGTTCAGACCTCCCCATGGGACAATGGGATTAACAGGTTGTTCTCGGGATATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAAACACAAAATAATTCCCTTTGGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA // Array 4 1768139-1768718 **** Predicted by CRISPRDetect 2.4 *** >NC_009253.1 Desulfotomaculum reducens MI-1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 1768139 37 100.0 40 ..................................... AAAAACCGAGTCTTCGAGAATTAACCTACCAACACAGTTT 1768216 37 100.0 43 ..................................... TAAATTTCTTTTATGTTCCTTCCATCTGCCTAATATATCAATA 1768296 37 100.0 40 ..................................... CTTGATTTATTATCTTCAGATTCACTATCTGCTCCAGCAT 1768373 37 100.0 40 ..................................... TATCCTAGTGTTTCATTTAAGCATTCAATTTCTTTTGCAA 1768450 37 100.0 40 ..................................... TTTTCTTCTGCTGTTTTTAATGTCTGTCCTGAAAGTTGTT 1768527 37 100.0 40 ..................................... AAAAACCGAGTCTTCGAGAATTAACCTACCAACACAGTTT 1768604 37 97.3 40 ...................................C. CTTGATTTATTATCTTCAGATTCACTATCTGCTCCAGCAT 1768681 35 91.9 0 .................................G.-- | TAT [1768711] Deletion [1768716] ========== ====== ====== ====== ===================================== =========================================== ================== 8 37 98.6 40 GTCAAAACACAAAATAATTCCCTTTGGGAATTGAAAC # Left flank : ATCCAACGCTTTAAAGACCATAATGCTCTGGCTAAATATGCCGGTTTAACTTGGAACCAACATCAATCAGGTGAATTTGAAGCCGAAGATACCAGCAGAACCAGGACCGGGAACAAGTATCTTCGTTATTACTTAATTCAGGCTGCTGATTCTGTACGGAAGCATGTTCCTGAGTACAAAGACTTCTACCAAAAGAAATATGATGAAGTACCAAAACACAAACATAAAAGGGCTCTCGTCTTAACCGCTAGAAAACTGGTACGGTTGGTGTTTTCGCTACTAAACACCAGGCAACTGTACACTTCACCAGAGAGGAGGGGGTAACGTCTTTACCCTAAAATCTACTCTCTTTTCCATTTACACCATTTAAAGGGAATTTTTCTTTGCTTAACTGGTGGGCTTATTTTGTATACCCTTTTTTAGGGTATAGGGTACACTTTTGTTAAATTAATTTCCAATTTTTTAGAATCATTCTCTTGACATATCACCGCTGGGCTTTG # Right flank : ATGATAGTAATACAAATTTGTTTTAAGGGCGTGAACACAATGGTTACGCTCTTTTTTTTTGTTGAATAAATACATCCTGCCAGGGTAATACTTAATAAATACATACTTTGACCTTGGGTGAAGTCAATGGCAGAACATAATATATCCAATGAACAGCATTACTTTCCAATTTCTTCTGTGGCAGAAATACTTTACTGCCCGAGAAACTTTTACTACCGGGTGGTTGAAGGGGCAGAAGATTCTAACCACCATCTATTGGAGGGCAAGTTGCAGGAGGAACGGCGGGACGAAAGACAGCGACTGGTTCGGGAAGGTTACCGTCAAGATAGGTCCATTCATGTTTCTTCAGAAAAACTTAACCTTTATGGTATTGTAGATATAGTGGAGCAGGGTAAAGAGATTTACCCGGTGGAATATAAGAAGGGCTTTCGAAAGGAAAGTTTGAATGATGATGTCCAGGTTTGTGCCCAGGCTATGGCTCTGGAAGAAAAACTAGGTCA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAAAACACAAAATAATTCCCTTTGGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //