Array 1 28831-28443 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXXI01000014.1 Vibrio mangrovi strain CECT 7927, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 28830 28 100.0 32 ............................ TACACCGCCAACCGATGGGTGAAGAATTGAAA 28770 28 100.0 32 ............................ TGGTTAAGGCTGTTCAGGAATTTAATCAACAG 28710 28 100.0 32 ............................ CGGGGACATGGCCAGCTGATCACATCGATGCC 28650 28 100.0 32 ............................ AGGGTGTATTCATTGCCTGGAAACAGCTTGGG 28590 28 100.0 32 ............................ ACGAAGATCATCACATTCATCAACGTACAGGC 28530 28 100.0 32 ............................ CTGCAACATACACCCACCGGCTAAACTCCTGA 28470 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 CTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : GCAATCAGGACAAAATAGTTTGAGAATACCCCGACTGTATTTATCACTTTCTCAAAAATATCGCCCACGTACTGATACCCACTAACTACAGAGAATGCAGAAATGACAACTAAAAATATGATTATTGAGAGATATTTATCTGACTTAGCCATAAGAACCTCCTTAAAAAAAATGAGTCTATCACAATAATTTCAGGGGCAAAAACTTGCTCAGTCGTGCAGGCGAATGCCATATACTTTCAGCGGGGAATCAGGTTTCTGTCTGGGGTGTTCAATGCCAGACTCTTTGTTCTGTGGCGATTTGACCCACCTGAAATCTTGCAAAATTTCAAGGTAATTATGGAGAATGACTGGGTAAAACGCTGGTTTTAACCCTATTTTTTCACGTTGATATAACCTATTGATTTATATAGACCATATTCGGAGCCTGAAAAATAGGGTTTTTCGGATTATTTCCGTCTCCGCTCTTTAATAATCCGGCCTGCAAAGATATATTGAACC # Right flank : TTTCTCCCCTCCGCTTGATCTGGATCTATCGTCTGCCTCTGGTTTTGAAAATTTGAACTATTTTACTGAAAAACGCGTTAGTTCCTGATCGGGCCTCTTGATAGCCTACAGACATTGATTATTACTGTTCAGCGAAATGAAATACGTAGGTATTTCGAGGAGTTACGCGATGTCTAATATGTTTTATATCCCTTCTTCTAACCTGATGGGTCCGGGCTGTTTGTCTGATGCAGCGAAAGAAATCGCGGCTCATGGTTTTAAGAATGCTTTGATTGTCACCGATAAAATCCTGAATCAAATCGGTGTGGTGGCAAAAGTAACAAAATTGCTTGCGGACTCAGAAGTTCAGGCCGTTGTTTTTGATGAGACCAAACCGAATCCAACCGTAGGTAATGTGGAAGCCGGGCTGGCGATACTCAAAGCAAACCAGTGTGACTGTGTGATTTCTCTGGGTGGCGGTTCACCTCATGACTGTGCAAAAGGTATCGCTTTGCTCGCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 30335-29886 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXXI01000014.1 Vibrio mangrovi strain CECT 7927, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 30334 28 96.4 32 ...........T................ GGCTCCGGAGTAAACCTGATATCGATAACCGA 30274 28 96.4 32 ...........T................ AAGCGACGGATGGCATCGAACACGTAACGCTC 30214 28 100.0 32 ............................ AATAAAGACCGTAACCCTCTAAACCATAATCA 30154 28 100.0 32 ............................ TCATTCGTCCTGTCAGCGGCCAAGGCGATTAG 30094 28 100.0 32 ............................ TCACTGCCGAGGAACAGGCGGCAGCAGCGGAG 30034 28 100.0 32 ............................ TCATAAACTTCTGTCAGGATGGTAATATTGAA 29974 28 100.0 32 ............................ CATTAAATCGCCTTCAGGCAATAACGACCAAC 29914 28 100.0 0 ............................ | A [29893] ========== ====== ====== ====== ============================ ================================ ================== 8 28 99.1 32 CTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : ACATTGATGGCAGAAAACTGGCTGAAAGGTCTGCGGGACTATACCTGTGTGAGCCCTATACAGGCAGTGCCTGATTGCATTCATGGATATTGCACGTTTTCCCGGATTCAGCAAAAAAGTCCGCATAATATGCGCAAACGCTCCATAGCAAAGGGTTGGCTAACACCAGAGGAAGCACTGACAAAGATCCCGGATTCACAACAAAAGTGTCTGGCACTTCCTTACCTGCAACTGCAAAGTCTCTCGAATAAACAGGTTATGCGGATATTTGTTCAACGGGGAGAACTGAACCAGAAACCGGTCAGCGGTTCATTTTCCAGTTACGGCCTGAGCCGCAGTACAACCGTTCCCTGGTTCTGACCCTGTTTTTACCCTATTTTTCACCCCGGATATAACTGTTTGATTTATATAGACCATATTCGGAGCCTGAAAAATAGGGTTTTTCGGGTGATTTCCGTCTCCGCTCTTTAATAATCCGGTCTGCAAAGATATATTGAACC # Right flank : ATGCAAATACCGGTGTTTTTCAAGATCAATGCCAAAATCCATAAGGGATTTTACGAGGGTCCGTAGGTAAATCTCTCAATCCATATTCATCTTGCAAATAACGTTTTTCAAAATTTCGTCTTCTTGCACCATCTGCCGGTAATTCTCTAAGAATATTAACAATATGCTGTATTTGAGGATCATTAAATCTTCTTCCTTGCATCAAATAATCATGAAGAAGTGGTATTAATTCACAATAAAGCTCATCAGCATGAGATCTATCGTCAAATACCCCTTTCACTATTTTATAAACAGTGTATACAGGGCCACCTTTTCTTATATTAGAGATCACACTTGCTACGTTCACGCCTAGCTTCCTTAAATAGAATAGTAAAAATGAAAATATTGATGATTATGTCAAAACCAAAAGTAGACATTAGATCAGTGGGATCTTGTTCTGAATACTTAAAATATGGATAGATATAAGAAATCAATGTCATTAAAACTGTAATATATGCCAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : CTTCACTGCCGTATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 38391-38060 **** Predicted by CRISPRDetect 2.4 *** >NZ_FXXI01000014.1 Vibrio mangrovi strain CECT 7927, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 38390 28 100.0 32 ............................ TGTTTGCGCTGTAGACATATCCCCGGAATTAA 38330 28 100.0 32 ............................ CAATCTCTCAGACTACATGGACAGCGATCCGG 38270 28 100.0 32 ............................ TTCCACTTTTTCAACTTCCATCAGCGTTGTTC 38210 28 100.0 32 ............................ ATCTCGTTATTGGTTCCCATCGGCTTTAGTTT 38150 28 100.0 32 ............................ ATCCTCGGTTTTGACTTCGCCATTGGCCGTTG 38090 28 89.3 0 .............C......A......C | CCT [38064] ========== ====== ====== ====== ============================ ================================ ================== 6 28 98.2 32 CTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : AAGAGACAATGGCCGCAATCATCAGGATATAAATAAACGGGCTTAAGAACTGCCGCAAAAAGATCCGCAACGGCCCGGCCATCGGAGGTTCCGGAAGACGATTCCGGCCATATTTCTCCAGTCTTTCTGCCGCTTCCCGTTGCGTTAAACCGGCCAAAGGTTCCGGTTCTGTTTTCTCTTGAGCTGTTTTTTCGTCAAAGGAGCCGAATTCCATCATTCCGAACCCTCCTGTATGCCAAATCACTGATGTCCTTTATATCTCAGAAAAGGATAGCAGCTCAGGCCACTACAAATCATGATCTGGGTTTCAAGTGTTATTGAAGGTTGGCGGGAATTTTGCGCAGTCTGTCCCTGTAACTTATCTGTTTTTAACCCTATTTTTAGGGATAAAATATAATTTATAAAAATCAATTAGTTATAATTCAGATAAAAAATAGGGTTTTTACTATGATTTCATCGTCTGCTCTTTAATAATCTGGCTGACAGAGATATATTGAACC # Right flank : CCATAAAAAGCACTTGATAGCATAAAAAACATTTGCTTATGATAGATACCTCCTCCGACCACTGATAAGGACATCTCTTGGCCAGTGAATTTTCTCCCAGCGAACTGAAAACGATTCTCCATTCCAAACGCGCCAATCTCTATTATCTGCAGCACTGCCGGGTACTGGTTAACGGTGGCCGGGTTGAATATGTCACCGATCAGGGCAAAGAGAGTCTGTACTGGAATATCCCGATTGCCAATACGACTGTAATAATGCTGGGGACCGGAACTTCCATCACTCAGGCAGCAATGAGGGAACTGGCAAAGGCCGGTGATAAACGCTGCCTGAATGGTTTTCGCACAGTACAAGCACTTGATGTGATGATTGATACCCTACAAGATACCGCAACTCAACTAGCGGTGTAATCTGATGAATATTCTGCTGATCTCACAATGTAGTAAACAAGCACTGCCAGAAACCCGCCGGGTACTAGACCAGTTTGCCGAACGTAAAGGCCG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //