Array 1 6621-915 **** Predicted by CRISPRDetect 2.4 *** >NZ_QFHI01000033.1 Legionella pneumophila strain RC03 NODE_33_length_18882_cov_20.2175_ID_3769, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 6620 32 100.0 34 ................................ AGAGATGACAAGATATTGTCCGCAACAGCTACAT 6554 32 100.0 34 ................................ ATTAAAAAATGGTGAGTTTGAGGATTTAAAAGAT 6488 32 100.0 35 ................................ TTTCATGATCATTCCCTGATTCTAACCATTCTCCA 6421 32 100.0 35 ................................ TGCATTAATAGCTTCTGCTGGGTTCCACCCACTAT 6354 32 100.0 34 ................................ ATTACATAAATTATCACGAGTATCAGGCGATACA 6288 32 100.0 34 ................................ TATCAATATTAAGCATCTTGGCATTCTTCAAATC 6222 32 100.0 35 ................................ TGAGAATCCTAAATTACAAAAATTAAAAGGCTCGT 6155 32 100.0 35 ................................ ATCCATGCGCCCTCTTTGGTAGTCGCTAATGCTGC 6088 32 100.0 34 ................................ GCCAAGCGGAAGTCGAACGTGACGAACCGCAAGA 6022 32 100.0 34 ................................ TGTTTTTTTATTGTAAACGTGAGTTATATTAGTG 5956 32 100.0 34 ................................ CGTTTATTTCGTCTAATTCTTCTTTGTTGAACCC 5890 32 100.0 35 ................................ GCAACTAATTCATAGAATGCAGTACCAAAATAACT 5823 32 100.0 35 ................................ TCTATGATGGCATCTTTGATAGCCATACTCAAGAG 5756 32 100.0 34 ................................ TGCTGTGTATAGGAGAGAACCTACACTCATAATT 5690 32 100.0 34 ................................ TTTTATTTTGAGTGTCTGGTAGGTATATTGGTAT 5624 32 100.0 34 ................................ TGCTGTGTATAGGAGAGAACCTACACTCATAATT 5558 32 100.0 33 ................................ TCATTTACATTTCTTATTTTTTGTTTAACTTGT 5493 32 100.0 35 ................................ AACAAAGCCCTATAAATCTTGATACACACTTAGGA 5426 32 100.0 36 ................................ TTATTAAAACATACAGTAATGAAGGCGATACAGTGT 5358 32 100.0 36 ................................ ATTATTTTAAGGGTGCAAGACTTAGGAGGTGTGGTA 5290 32 100.0 34 ................................ GGGCTATATACGTCCTGTTAAACACCTACCGCAC 5224 32 100.0 34 ................................ ATGCTATAACGTATGATAAAATAAAAGACGAAAT 5158 32 100.0 35 ................................ TAGCCGCTAATGCCTTAATTCCAGCGCCGTATTGC 5091 32 100.0 35 ................................ ATGATGATATGAGTAGGGTTAAGGGTTTGGTCGAT 5024 32 100.0 36 ................................ AATTTTGACATTGATTTATGTGCTACTAAAGAAAAT 4956 32 100.0 34 ................................ TCAAAAGACCGAAATACCATCTCGAATGAGATTT 4890 32 100.0 35 ................................ AATAAATTAAAAAAGCTTACAGGCGGTGTTGGCAC 4823 32 100.0 35 ................................ CGGTGTGATCGCCGTCAACCGCTCCCGCCGAGGTT 4756 32 100.0 36 ................................ CAGTAAAATGCAATAAATATTGTATTTATTTTACAC 4688 32 100.0 35 ................................ ATACAAACGGGATAGGTAATAATCAAGCTAATAGA 4621 32 100.0 34 ................................ GCTAATATCAATTGTATGTTCTTCTTTTAGACCT 4555 32 100.0 34 ................................ AAATCTAATTGGGTAGTTTCGCGCAACGGGCCGT 4489 32 100.0 34 ................................ AAATTACTACAAACCAGAATACTAGTAAAAGGTT 4423 32 100.0 34 ................................ TGCAAGTCCTGCTATCAATTGATCGTCTGTTAAT 4357 32 100.0 34 ................................ CATCCGTTCATATCTTCGGAAGCAATAACCCAAA 4291 32 100.0 36 ................................ AATCGCCTCCATGCCGTATTTTCTGGCCTGTTCCGG 4223 32 100.0 36 ................................ GTTAATATGAAAGGCCGAATAATTCATCGGCACGCC 4155 32 100.0 35 ................................ GGGATTAGTTATCCTGCTATTCGAGACATTTTTTA 4088 32 100.0 35 ................................ CATCACGAATGACTTGCTCTACTTGATTGCCTTTT 4021 32 100.0 35 ................................ ATTTCATAGTTCCTTAATCTGTAAAAAGCTCGCCA 3954 32 100.0 34 ................................ CCTCCTCATCTGCTTTTTGAGTTCTTAAATCCAT 3888 32 100.0 35 ................................ CATCACATTGACCCAACACAAAAAGAATTCGCAAT 3821 32 100.0 35 ................................ ATCAAATCATAACCTTGTTTTATGCAATATTCCTT 3754 32 100.0 35 ................................ AATCTTAAGAGGGCATTCGCCTGAGCACGGAATGA 3687 32 100.0 34 ................................ TGAACGCAAAATGATGGCAAGAGAAATCGAAGAC 3621 32 100.0 34 ................................ AAATTTAGTTACAAGACTCGATATGATGAGGGAT 3555 32 100.0 36 ................................ GACTATTGTTTGTCATCATCCGGCTCGCCGCAAAAA 3487 32 100.0 34 ................................ ACATTAAACGCCTTCGCAAAGAATTGGCCGAAAG 3421 32 100.0 35 ................................ GAACTTACGAATCTTTGAACTGGAAATGCCAACGC 3354 32 100.0 34 ................................ AATGACAGTATGGGATGTGAAATCGGTTATCAAT 3288 32 100.0 36 ................................ ACGAGGACGTTTACTTTAGCTTGCTGGTTATGACAG 3220 32 100.0 36 ................................ TTTTGCGAGAAAAATTTAATAAATGCCAGTTGACAC 3152 32 100.0 35 ................................ AATAAAATAAAATCTTTCTGCTCATCACTAAGCCT 3085 32 100.0 34 ................................ CTGCCGTAACTCTTAACAGCAATATCTCTCAAAG 3019 32 100.0 35 ................................ ATTTTAATCCTTGGTACTAAGTAAGGGGATTTAAA 2952 32 100.0 34 ................................ TAATAATCAATTCCTTTTTGATTAATAAAATTAG 2886 32 100.0 33 ................................ TGCCAGACCGTTAAGCTGCCAATAAACTCCTAG 2821 32 100.0 35 ................................ TGTAGTTGGGCTATCTTCTGCGACTAAAGTCCAAA 2754 32 100.0 36 ................................ ACGGATGCTGAGGAAAAATACAAATTGTTTTCGCAA 2686 32 100.0 35 ................................ CGTTGATATTATCAAAGGGTAAGTTTGCAAGGATG 2619 32 100.0 35 ................................ TCCAAAGTCTTTGACTTTCATAGGTCCGGCTTGGA 2552 32 100.0 35 ................................ AGATAAAACTTATCAAAATTGGCGCAAGAAATACC 2485 32 100.0 35 ................................ AGATAAAACCTATCAAAATTGGCGCAAGAAATATC 2418 32 100.0 35 ................................ TATCTACTATTTGCGACCATTCAGCAACACTAATT 2351 32 100.0 35 ................................ CACAAGCACAAATTAAATCTATCTTGTTGCAAAAT 2284 32 100.0 36 ................................ TTTTCTGTATCTGCTATATATTCCTCGGCGACTGCG 2216 32 100.0 34 ................................ CAAGCTTTATAGCCGTAGAGACAAGATACTTCAA 2150 32 100.0 36 ................................ AATCCTAATGACAATGAAGTCTTTATTCCAGATTTA 2082 32 100.0 34 ................................ ATACCGACACATTCATAACATTTTGCAGTGATTG 2016 32 100.0 35 ................................ CTCGACAATGTCGCTGGGAATTACTCGAATAATAC 1949 32 100.0 35 ................................ TTATTTGTTCAAACACTTCATCGTTTTGTTCCTCA 1882 32 100.0 35 ................................ AACTAAAGACCCAGCAGGAAAAACCTGTGCTGTTG 1815 32 100.0 34 ................................ AACACAGAGAATAGAACAGAAATCGACATGGATA 1749 32 100.0 37 ................................ GTCCCCGGGTCTACTACATTTTGTTGATATGTTTCTA 1680 32 96.9 38 .......................A........ TGCTTCCTGCAACGGTTGCAGACAAGCGAACATAACGC 1610 32 100.0 34 ................................ AGATGTTCGTCCGCCGCTAGGCAAGGCTCAATCG 1544 32 100.0 35 ................................ GTTTTAACCGTGGTTGATATTAAGTGCGTCTTTGA 1477 32 100.0 35 ................................ AATTGAATTAGAGCCGAATCCTACAGGGAATCCTG 1410 32 100.0 34 ................................ ATAATATCTAAAGCTTTACTAAAACCTTCGGCAA 1344 32 100.0 34 ................................ ATTACAATCTTACAAGGCTAGTGTTCGCAGGGCG 1278 32 100.0 34 ................................ ATATTGTTGTTACAGAGGGTGAATTCGATGCAGC 1212 32 100.0 34 ................................ ACATGAACAACCCTACTATTCCCACTAACCTAAC 1146 32 100.0 35 ................................ TAACCCAAAACCATTCATTGAGAAAGCTTGGGAAG 1079 32 100.0 35 ................................ TTTATGTATGGGGCGATATTATCTTAAGTAATGGT 1012 32 100.0 34 ................................ CAAATACACTTCTTTAATTCTTCTGTGCGTCCTG 946 32 90.6 0 ...................T.C........T. | ========== ====== ====== ====== ================================ ====================================== ================== 86 32 99.9 35 GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Left flank : AATTTTATACTCCTTATTTAGTGAAGTAATTATGTTTGTAGTAATAACTTATGATGTTAATGTAACAACTTCTGGTGGGCAGAAACGTTTACGGAATATTGCAAAAACATGTCTTGATTATGGTTTTAGAGTGCAAAACTCTGTATTTGAATGCGAAGTTGAACCTGATCGGTTCGTTGCGTTAAAAAATACACTTTTAGAGTTATTTGATCCTGATGCTGATAGCTTACGATTTTATTTTTTAGGCAAAAAAGGGAAGGATAAAATCGAACATTTTGGAGCTAATAAGGTCATCGACCCCTTGAGAGATCCACTGATACTGTAATTCGCTAACTTGAAGTTCTCATATTTTTACCGGTCAATTATCGGATTATAACCACTTGATATTTATATTTTTTTTTATGTGTGCTTATCAAGCTAATCAATAAATATAATTTTTTATTATTATTAGCGATATTTAGCATTTTTTTCGATATATTTCAATATGCTATAATCATACT # Right flank : ACGGGTAGCATGAGTTTTTTAAGTGAACAAAAGCGTCGCGTTTAGCAAAGATAGTATGAATAAATTTTAATTAAAATGAACTTGATGTGAATTGTTACAAACATTTCATATCGATTTTAGGTATATTTAGCCAGAAGCTCTTTGTCTTTATCTTTGACTTTGATATCTTAAAGAAGAAGTTCCAGATTTTTTACAAGGATGTGAATATGTCTGACTTACAACAATTGCCTAAGACTATCCTGAGATTTTCCTGGCATTTTATAAAAAAAAGTCCCTGGCTTTATGCTTTATTTTTCATAGCACCAGTGGTGATGGTGCTTGAAACGAATGTGATTCCCTATGCTTTAAAAATGATTATTGATGGGATAACAAACCATAAAGGGGGAAAAGAAAGCATATTTCAAGACATCGCACCGGCTTTGTATTTGGGTGGAGTTGCCTGGTTTGGTGTGATTCTGGTGTTGCGCTTGCATAATTGGTGGCAAGCCTACCTTGTTCCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //