Array 1 277331-279145 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGURE010000006.1 Bacteroides thetaiotaomicron strain jmh66 NODE_6_covk_43.975997_covr_97.19_cutoff_51, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 277331 47 100.0 30 ............................................... GGTTGCTCCTATTGATGATCAATATTATTA 277408 47 100.0 30 ............................................... TTTCAGCTTATTATAGTCCATATTCATAAG 277485 47 100.0 30 ............................................... ATCTACGGAAGATGAAAAAAGGAAACTGTT 277562 47 100.0 30 ............................................... TCAGCTTTTGTGTACTTCAGTAGAGGATCT 277639 47 100.0 31 ............................................... TCATATGCTTTGTCTAAATTAACCATGATTT 277717 47 100.0 30 ............................................... TTTTATATCCTGCTAATCCCATGCCTACCC 277794 47 100.0 30 ............................................... CAGTCAAGGTAACGAATTTTGGGTAACACA 277871 47 100.0 29 ............................................... TATAGGCGAGGCTATTAAAAATACCATGA 277947 47 100.0 30 ............................................... TATCACGCATCAAGAATGTAATGAAGTTGC 278024 47 100.0 29 ............................................... TGGGGGACCATAGTAGACAGCTTAAGAAG 278100 47 100.0 29 ............................................... GGTATGAATCTAACTTAGTTTTATGATCT 278176 47 100.0 30 ............................................... GTAGTCAGCTATTACAGCTTGTGCTCCATT 278253 47 100.0 30 ............................................... TTTATTTCATAAGATATCTTTTCCGGTCTT 278330 47 100.0 30 ............................................... AATAAAGCGAGACTTCACAAAGCTGATCAA 278407 47 100.0 30 ............................................... TTCCCGGTGATACGTTTAAGATTGATATTA 278484 47 100.0 30 ............................................... TCTACCACCTACGGTGCTCCGTCGGCTCCG 278561 47 100.0 29 ............................................... TAGTTCGATAATAGCGCATTCTAGGTTGT 278637 47 100.0 30 ............................................... AGGATTATTTACGTTCTTCACATAAGTCCG 278714 47 100.0 29 ............................................... TGACGAATTCATTTGTCACGGAAAAAAAT 278790 47 100.0 30 ............................................... CTATAATCATTATTATAAACGAATTATTTC 278867 47 100.0 30 ............................................... ATAGACGTTCGGTTACGAAGTTGCGTAGCA 278944 47 100.0 29 ............................................... CCGAAGACAACATCCCAATTGATGATGTT 279020 47 100.0 29 ............................................... TCTGATATCTTCATTATTTTGATTTTATA 279096 47 85.1 0 .........G...A......A........A.....A.....T.T... | C,A,G [279136,279138,279141] ========== ====== ====== ====== =============================================== =============================== ================== 24 47 99.4 30 GTTGTGTCCAATGGTTCAAAGATACTAAATTGAAAGCAAATCACAAC # Left flank : GGCATCGCTTTATAAATGTTTCAGTGGGGAAGTTCGTCGAATTTCGTATCCTGAACGGTAATGGATCGATTTAGTGAATATCGAGTCATGTGGGTACTTGTTCTTTTTGATTTGCCGACTGAAACAAAGAAAGATAAGAAGGCTTATGCGGATTTCAGAAAGAATTTGCAAAAGGATGGTTTTACGATGTTTCAGTTTTCTATTTACGTGCGTCATTGCGCTAGTAGTGAGAATGCAATGGTGCATATAAAAAGAGTTAAATCTTTTCTCCCTGAATTTGGGCAGATTGGAATTATGTGTATTACGGATAAACAATTTGGGGACATAGAGCTTTTTTATGGGAAGAAAATCCAAAATGTGAATTCACCAGGACAGCAATTAGAACTGTTTTAAAATAAAAATCCCGCATTGACGCGGGATTTTTTGATGGAAACAACTCTCTTTTTTCTTTTCTGAACTTCTTTGTAAATTGTTGATTCACAATGGGTAAGTGATAATTA # Right flank : CAAATTTTAGTTATATTTCTCTGCCTGTTATTTCTGCTGCCTCAAGTATTGTAGTTTGTTCATATGATGTTAAATTGCTAATGATGTGAGATTATACTTTGTCTATTACCCTTTCTTTATCTTTATCCAAGTCCATCGATGCCAGATGGTTTCCAATGGTCCTTGTTTGTGCTTCGACAGCCACCATTTACAGAACTGTACCTGTAATAGGAACAGAATGATTCCGATAATCAGACTGAGCGTATATCCGCAATAGGGAGCCAGATAAAATCCGAATGGGAAGTAGATGATAGCTCCCATAATAGATTGTGTGATGTAGTTAGTCAGACTCATTTTTCCGTAAAAGCGCAGGTTGGAAACGGTTTTCTGGAACTTAGCCTTCTGATAAAGTAAGATGAAGGAAGCAATCAGTACGATGGTAAATGCGAATTTCTGCCACATATCGAAAGCTGTCCCTACGGTCTGTTGAATCAGGCTACTGTCACTTTGCATGATCTGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTCCAATGGTTCAAAGATACTAAATTGAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-1.50,-1.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [4.5,4.5 Confidence: NA] # Array family : II-C [Matched known repeat from this family], //