Array 1 129290-128528 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBAS01000011.1 Legionella pneumophila strain WX2011036 Scaffold10_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 129289 37 100.0 36 ..................................... TCTTGAACAATTGCCACTTGAAAACCATCATCTACA 129216 37 100.0 34 ..................................... ATCCATGTGTCTTGCATCCTTGTAATACCAGCCG 129145 37 100.0 34 ..................................... GTAATGCAATTGACACATTGCCCGCATTCTTGAA 129074 37 100.0 36 ..................................... TTTCTCAGCAAAAAAGGCTTGTCTGTTTATCCTTAA 129001 37 100.0 36 ..................................... ACATCCCCCTTTTCCACTACTTCAAAAGATCTCAAC 128928 37 100.0 37 ..................................... GACAAGAAAGGCTCCTCTACTAAAACCCACAAAGTAT 128854 37 100.0 36 ..................................... ATCCTAACCCACTCAACGGGATTAACTTTCTTTGAA 128781 37 100.0 37 ..................................... ACTTCCATTTCATCATCAAAATCTCGAATGCTAAAAG 128707 37 100.0 34 ..................................... TGTATGTGAAAAGCGTTTTAAAAGCTTAAAGAAA 128636 37 100.0 35 ..................................... GTCGCATCGTTTTCATGGTCGTAGCCTGACTTCTT 128564 37 81.1 0 ....A......C...........TT...T.A.....T | ========== ====== ====== ====== ===================================== ===================================== ================== 11 37 98.3 36 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCATATGGAATGCTTTCTGAATTGATTTTTGAAAAATCATGTACCCGAGGCTATATTATTACTGGTGAAAAAGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGCTTGAAATTTATGCTAAAATAAAGAAGATTTTTGACACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTAAAATCGTTATATGCTCGCTATTAATACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTCAAGTATTGCCTTTTTTTTCGAAAAATCAAGTCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAACTCCATGGAGTTATTATTTTATATAATTAAACATGTCGTAACTCCATGAATGTGACACTTTCATGGAGTTACGACAGCCGTTATGTTTGCTTGTTTTTCATCTTATTTGCTTAATAATTAACTTGATAATTATTAAGTGCTTTTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAATTTTCAAAACCATGCCCAACACTGGATTGTCTTTTGTTTTGTACATCTCAACTGAATATAATACTAGTGAATTTATTTTATTAGATAATTATTTCAGTAAGTTCTAATATTCAGGACTAATTTCCCAAGAATATTAACCTCAGCAATATCACTCACTTTAATATCTGGCCAATTATCATTAAGCGTTAAAAGCTCGAATTGTGAGGATGTATAGGACAATTTTTTATATACACAGATAATTGCCT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //