Array 1 4873-6821 **** Predicted by CRISPRDetect 2.4 *** >NZ_ORYN01000280.1 Xanthomonas fragariae strain ICMP 13780 isolate ICMP 13780, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4873 28 100.0 32 ............................ AGACGGTACAACTGCATACGCTAGAGGTATAG 4933 28 100.0 33 ............................ GTCATCGTGACAACCGAATACCGTGGTGTCTTC 4994 28 100.0 32 ............................ TTACGGTCATGTCCTGGATATGGTGTCCAGGA 5054 28 100.0 32 ............................ TTTCAGATCCCTCGCCTGGGTGGCCTACTCGT 5114 28 100.0 32 ............................ GTCCATGCGGCCGGCAGCCAACAGGCTGCGAA 5174 28 100.0 32 ............................ TATGTCGCTGAGGGGTGATCCATACCTAACCC 5234 28 100.0 32 ............................ CTGGCTGCAACCGCTACTCCGTAATAACTAGG 5294 28 100.0 32 ............................ ACCAGGTCCCGGCCCTTCTGGGAGTTCACTGC 5354 28 100.0 32 ............................ AATGAGCAATAACTTTTGCGCTAGTGTTCATC 5414 28 100.0 32 ............................ ACATTATCTTTTCCGCGAATCAAAAGCTTAAT 5474 28 100.0 32 ............................ TTCCGGGGCAATCCCTTTACGCCTTCTTGGCC 5534 28 100.0 32 ............................ ACCAAACGAACTGGTCCAGGCTAGGATCCGTT 5594 28 100.0 32 ............................ TTCTGGGACCACACAACCTCGCCTGCGTGCAC 5654 28 100.0 32 ............................ GTTCAGGGCAGGCGAAAGGTCTCAGCGCTGCA 5714 28 100.0 32 ............................ GCATCGACCCAATGGCCGCCCTTGCCAGGCTC 5774 28 100.0 32 ............................ TGCAGATGCGCGCGACGAATATCGGACGTGTC 5834 28 100.0 32 ............................ AAACATGCGGGGATCAGCACGGCCATCGGTTC 5894 28 100.0 32 ............................ CGTAGCCGGGAACTCAGCCAACTGTGCTTGCA 5954 28 100.0 32 ............................ GATTTCACTGATTGATCTGGACACTGTGCAGC 6014 28 100.0 32 ............................ TCGAAGTAGGCATAAAGCACGTTGGGCAGCCG 6074 28 100.0 32 ............................ CAGACAAGCCAGACGCCGACCCACTGATAGTC 6134 28 100.0 32 ............................ CGTCGTTTCGCGTCGTCCACCGCAGCCAAGGT 6194 28 100.0 32 ............................ ACCAACGACGGGTGTCGCGCGCACCTGGGTAG 6254 28 100.0 32 ............................ ACCTACGAGCCCCAGCCGTATGCAGAGGTTTC 6314 28 100.0 32 ............................ CATTAGGCTGCACAGTGTCCAGATCAATCAGT 6374 28 100.0 32 ............................ AGCCGCACCCTTGCAGACTGTACTCTCTGCAT 6434 28 100.0 32 ............................ TCCACGTCCTCTTGAACAACATGTTCAGGGAG 6494 28 100.0 32 ............................ TGCAGCAGGGGGAGGAACTTCCGTATCAAGAC 6554 28 100.0 32 ............................ TGTAGGAGCAGACGGGGACAATACGCAAGCAG 6614 28 100.0 32 ............................ TTTGCGCCACACCGAAACCGAATTCCGCGACA 6674 28 100.0 32 ............................ TAAGCAGCGCGTTAAGAATACATTCGTGACCT 6734 28 100.0 32 ............................ TAGATGCCCTGATTGCAGAAGTCAGGACCTCT 6794 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 33 28 100.0 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : TCTATGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //