Array 1 51549-52090 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHOON010000009.1 Bacteroides thetaiotaomicron strain DFI.2.13 HPHDNBCP_9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 51549 29 100.0 36 ............................. GGTAAAAGAAGCGATATCTTCAATGATCAGTTTATT 51614 29 100.0 34 ............................. GTACTTTCTGGCTTTATAATAATAGCATTTCCGG 51677 29 100.0 36 ............................. GTTGTTGGCGAAATTTCGAATTGTCTCCCATTGCTT 51742 29 100.0 35 ............................. AATATACAGAAAAGTCTCTGTATTGCAATGGATGA 51806 29 100.0 36 ............................. AATTTTGCTAATTCGATTTGAAGTTCAGCAGCTTGA 51871 29 100.0 36 ............................. GAGGAACCGGCAAGTATCATCATTAAAGAAGAAATT 51936 29 100.0 34 ............................. AAAAGTCGTATACCGGCTTAGCAAATTCATAGAA 51999 29 100.0 34 ............................. TTGCTTCTGCCGTAGATCTGGCTACTGCACCGGT 52062 29 89.7 0 ...........G.....T......A.... | ========== ====== ====== ====== ============================= ==================================== ================== 9 29 98.9 35 GTATTAATTGGACCTTGCGGAATTGAAAC # Left flank : CTTTTAAGATGTATTGGTAGAGTATGTATGTCATTTTAGTATATGATTGTGGAGAGAGAAGAGTAGCTAAAATGTTGAAACTGTGTCGTAAATATTTAAACTGGATACAGAATTCTGTTTTTGAAGGTGAAATATCTGAAGTACGCTTAAAAGAACTCTTATCTTCAGCTAAAAAGTTTATAGATGAATCTGAAGATAGTATCATTGTTTTCAAAGGACCTAATCATAGCTCTTTGGAAAAAGAAATAGTAGGGAAAGAACGGTGTAGTATAGATAATTTTCTGTAACTTAGTTGTCGATGATTCTAATACTAGCTTCCTTCCCAGGGAAGATACTTTTTAAGAGCTCTTTGACTTGTTGATTTACAGCAATATAAGTGTAGTGTCGATCTCCAGTACTTTTTATACTTTTAGGGATCGACACTCTTTTGTTCTTTTAAAAAACTTTTTTAGAATTGTAACTTACTCATTTATAATGGTGATTGTTGGATTGATGAGAGA # Right flank : CTTGTGATTTCGTTTTTTTGATTGATTGCTATTCTGATACTAATGAAAAAGACTTTAACTGGCTAGAGTGCTTTATTTTCGATATTATTTTATACATGAAGGTGACTTCAATTATATACTGATTCTTGAAATGTAGTTTTATAGAATAATAAGGTCAATCTTTGCTTTTAGTTTATTTGTTGTAGTTTGAATAATAATAAAAAAGATTTTTACCATTCATAAGAAATACAGATCTGAGGCACCCATTCCCATCTTTTTTGTATGGTGTTATATTGATATTGTACACTGGTTTTCAATTTCCAGCCTTTGCCTATTTTTAAAACAATGTCGCTGCCTAGTGTGGTTGGTATTGCTTCAGAGGAAAGTCTGCGGTATCTTCGGGTGTCCAGATTTTGTTCACCATATATGCTGAGAAGCCATTTTTTAGAGAGCTTATAATCCATTTGAGTTTGGATATGAAAGTGGTTTGAGCTTTCACTAAAGTTACTTTTACTATGCAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGGACCTTGCGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //