Array 1 1926935-1930324 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024443.1 Moraxella osloensis strain NP7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1926935 28 100.0 32 ............................ ACCGTTACTATCTAATTTAACGCCAAAAGTAC 1926995 28 100.0 32 ............................ CTTAGACGCTATAATTTTATTGGCTGTACTAA 1927055 28 100.0 32 ............................ CAATAGGCAGTTGTGGCATATTTTTTATTCTT 1927115 28 100.0 32 ............................ TTTTACAGGGGGCGTTAAATCATGGTCATGTC 1927175 28 100.0 32 ............................ AATCGCAAATTTGAGCGAAAATGAAATTTGTT 1927235 28 100.0 32 ............................ ATTTGCGGATTTTGGGCGTAATGTGTTGAAGG 1927295 28 100.0 32 ............................ ATGCCCACACGTTTGCCGACCCGTCAAATTGG 1927355 28 100.0 32 ............................ TTGGTACTATGTCTGCTCATGCTGTGGATGTA 1927415 28 100.0 32 ............................ CCAGTCCTGACGACTGGAGAACCACACCTGAC 1927475 28 100.0 32 ............................ GAACCCATGACGCCAGTAACCAAGACTACATT 1927535 28 100.0 32 ............................ ACCAACAACGGCAAGACCTTGTGCAACGCGCT 1927595 28 100.0 32 ............................ TACAAGACGAAAACGACAAACTGGAAAAAGAA 1927655 28 100.0 32 ............................ TCGCAAAAGGCATAGTAGGCGGTGCAATCGCT 1927715 28 100.0 32 ............................ CAAATAAATCCCGTTTCAACCATTAGCAATAA 1927775 28 100.0 32 ............................ TGGCAATCGCTGTCTTCAAGCTCTATACCTTC 1927835 28 100.0 33 ............................ ATTGCCCCTTGAACAGTCACCCCATTTTCAACA 1927896 28 100.0 32 ............................ TGAATTGATTGAAGCCGCTGGCATACAGATTA 1927956 28 100.0 32 ............................ TTGATTACCGAACATCTAATGATAGAAATAAT 1928016 28 100.0 32 ............................ TATTGTGATACTTGTTTGGATTTACCTAGCTT 1928076 28 100.0 32 ............................ TTACCGCCAACGTCTTTTACAGCTTCACCGAC 1928136 28 100.0 32 ............................ ATTCAGCCGAACTATACGCGCCTTCAAAATCA 1928196 28 100.0 32 ............................ TAGTATGTCCGCCAATGCTAAAATTATTTCAT 1928256 28 100.0 32 ............................ TTGCCAGTTTTGAAGCAATCAGAAATCGAAAG 1928316 28 100.0 32 ............................ TTATCCGCACGCTGTCATGCTGCCAATGTTAC 1928376 28 100.0 32 ............................ TTGCCCCAGTTTTGTTGATTGACTGCCAATGA 1928436 28 100.0 32 ............................ AAAAAAACCATCGGAGATTAAATCAGCGCAAT 1928496 28 100.0 32 ............................ TGTCCAAAGTACACCCGCAAAAACCGATAACA 1928556 28 100.0 32 ............................ TCTGACGCTGTTATCACCGCCGAAGGTGTTAA 1928616 28 100.0 32 ............................ TTTAAAAATAGTTCTTTAATCATAACTTACCC 1928676 28 100.0 32 ............................ TGCGTCAACGCCTTTATCTCAACAACAACAAC 1928736 28 100.0 32 ............................ TACTACCGCTTTAAAATTTGGGTGTAACAATG 1928796 28 100.0 32 ............................ ATAGATATCATGCCCGGTATGCCTGTGTACCT 1928856 28 100.0 32 ............................ AATGCCATCAATCAGCCATTCTGGGCTAACCT 1928916 28 100.0 33 ............................ TATTTATCAAAGATGGCAAATTGTTTTTTAAAT 1928977 28 100.0 32 ............................ TCCCGGTAGCTTTTTTTATGGCTCGTAGTTTA 1929037 28 100.0 32 ............................ TTACCGTGACCGTTTGCGCCAGTGATTAAAGT 1929097 28 100.0 32 ............................ AAAAGTTACGCACAATGAAAAACTTTTTATCT 1929157 28 100.0 32 ............................ TGAAACAAATAATATCGCTATAGATGCCCAAA 1929217 28 100.0 32 ............................ CCTACCGCGCTCCGCTTGCTTGCTCAAAAAAT 1929277 28 100.0 32 ............................ TTTAAGCGAATTAAGACGTTTTCACATAAAAA 1929337 28 100.0 32 ............................ CAGATGAAAAAAGTTTTTTATTTTATGCTTAA 1929397 28 100.0 32 ............................ TTGTAAAGATGTTCTCGCCATGCTTGCTGAAG 1929457 28 100.0 32 ............................ GTTATTTAGTGATAACAAAGCCCGATAATCCG 1929517 28 100.0 32 ............................ GCCAAGCTTATTAAAAAACTTTTGAGCAACAG 1929577 28 100.0 32 ............................ ATTTGCTTGCCAAGTGGTTAGATAATAACAAT 1929637 28 100.0 32 ............................ TTTACTTGATTTTCGAGAAACAACAGGAACAA 1929697 28 100.0 32 ............................ ATCAAAAAAACATTGCCTTTAGATGACCTTTT 1929757 28 100.0 32 ............................ GCAACTCATACAGGGTGGGAAGGTACTGCACC 1929817 28 100.0 32 ............................ ATATTGCGGGTTTTGATTATGCAATATCAATC 1929877 28 100.0 32 ............................ AAGCAAATCATATAACGCCATTGCGACCATGC 1929937 28 100.0 32 ............................ TAAAGAAAGGGTTACTAATTGCTTAAAAAGGC 1929997 28 100.0 32 ............................ TACCATTCAAGACTTGGAAAGAATAAAAGAAG 1930057 28 100.0 32 ............................ CTAAAATGTTACTCCTAACTCATGTAAGGGGT 1930117 28 100.0 32 ............................ TGTGCTGCCTTGGCTGTTGCATCTGCCTGTGA 1930177 28 100.0 32 ............................ TATTTTGTCCAGCGCGTCCAAGTAAGTAGCGT 1930237 28 100.0 32 ............................ AAGACAATCACAGCGACATTATCCGTCTAGGT 1930297 28 89.3 0 ........................T.GT | ========== ====== ====== ====== ============================ ================================= ================== 57 28 99.8 32 GTTCGCCATCGCATAGATGGTTTAGAAA # Left flank : TCGCTGGGCAAAGGTATTATATAAAAGCTTGGCGGAAGGCTGTGGCTTTAAATTTACCCGCGAGGAAGGCAAAAATGCCAATGATGATATCGCCGATATCGCCAATAGCTACCTTGACCACGGGAATTATATCGCTTATGGCTACGCGGCAGTTGCATTACATGGGTTAGGTATTAGCTTTGCTCTACCGATGCTACATGGTAAAACCCGCCGTGGTGGTTTGGTGTTTGATGTAGCAGATTTGGTCAAAGATGCGATGGTGATGCCACAAGCATTTATTTCGGCAAAACTGGGGCATAATCAAAAAGAGTTTCGGATGCAACTTATCGAGATTTGCCAAGACCAAGATGTGTTGGATTATATGTTTGGCTTCGTTGTAGACACTTGCCAAAAAATTAAATAAAATCAGCTGCTTATAAAAAGCACTTTAAAACGAAGTGTCTTGACTGAATTAAAACGTATATAATTGATATCTGGGGATTTTGTCAGAAAATTCTCCA # Right flank : TTAAAACCGAATTATACCAGGCAACTTTCAACACAATCCTTAAGCGTATCAAACTTGCTTAGCGTTAAACGAACCTTTTGCTTAATCACTGCCCACAACTGCTCAATCGGATTAAGTTCAGGTGAGTAAGGCGGTAAGTACGTCAGTTCAATATTATAAAGTTCCGCAATTTGCTTTAAATCGCCACCATGATGAAATCTGGCATTATCCAACACCAATACACGTTTTGGATAATTGCCCTTATCATCTTTTGGCAAAGATTGCCCCAACGTGTGTAGCCAGTTTTCAACCGTCACTCGGTTACAACCACCTTCAAAGGTAACAGGTGCGATGAGTTTAAACTCATTTAATCGCATCGCTCCGATTAAGTTTAAGCGTTTACCCTTATTGGCATCGATTTTGGCATAACAGGGTTTGCCAATCGGTGACCAACTGCGGGTGTAATATTGCCTTTGATAAAAACCTGTTTCATCCATAAACAGTATGTTGTCAGCCGTGAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCCATCGCATAGATGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCGCCATCGCATAGATGGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1931337-1933226 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024443.1 Moraxella osloensis strain NP7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1931337 28 100.0 32 ............................ AATAAAGCGTTCACCGTCACTGATAACATCGT 1931397 28 100.0 32 ............................ TGTGCAGTAATGGCAAGCATGTCTATGCTAGT 1931457 28 100.0 33 ............................ GTGCAATGGCTTTTGAAGCCTCTATCATCACTG 1931518 28 100.0 32 ............................ GTTGCTAACACGGCTCATATAGTCAATCAGTT 1931578 28 100.0 32 ............................ TCAATCGGTGCAGTAATAGTTTCAGGCGTAGG 1931638 28 100.0 32 ............................ TCAATCGGTGCAGTAATAGTTTCAGGCGTAGG 1931698 28 100.0 32 ............................ TCCAGATTCCGTATGACAATCATGACGGCTTT 1931758 28 100.0 32 ............................ ATGGTGGCGGTGGTGATGTCCAACATGGCGTT 1931818 28 100.0 32 ............................ GCTAAATCGCTTGCACCTTCTTGCAAAATTGA 1931878 28 100.0 32 ............................ TTGTATCTCTTTTAAGATTCTTAGATACTCAT 1931938 28 100.0 32 ............................ TTTGAAAAAGCTATCCCTGTAATTAGTGATGG 1931998 28 100.0 32 ............................ ATCATCAGCCACACCTACAGCACGCTGTAGCA 1932058 28 100.0 32 ............................ AAAAGGTGACCGCAATGCATTAATCACCAGTA 1932118 28 100.0 32 ............................ TTTTTGCTTCATCTCGATAAACAAGCCGTGAT 1932178 28 100.0 32 ............................ AAGCATGGCTTAGTCAAGTCATCAGCGTAATA 1932238 28 100.0 32 ............................ CACATGGATTTATAGCCTAGATTCATGCTTGA 1932298 28 100.0 32 ............................ ACCTACAAACGGCAAGGCAATGTTGTTTATTT 1932358 28 100.0 32 ............................ AACTGCCGCCATCTTTGGCGTTGATATATAGA 1932418 28 100.0 32 ............................ ACTTCGGTGGGTTTTTTATTTAAGGAGGCGTA 1932478 28 100.0 32 ............................ GTGTACCGTCTTGATTATTTTGACGGCGAATA 1932538 28 100.0 33 ............................ CTGTGCCATCGTTAACTGCCGCGCCTGTTTTAA 1932599 28 100.0 32 ............................ TTAATGATGAGGTTGCTGAGATATTTGCTGAG 1932659 28 100.0 32 ............................ CAAAGCGCCGATGTTTTAACTCGTTTTTTTGG 1932719 28 100.0 32 ............................ ATGCACGACACCCACTAAAACCCAAAGTCAAA 1932779 28 100.0 32 ............................ CCACTGGTGAAGATGAAGCACCAACCGAACAA 1932839 28 100.0 32 ............................ TTTACGCGCCTTATGATAGCTTACCCAGTAAT 1932899 28 100.0 32 ............................ AATGACCTTTACGCGCCTTATGATAGCTTACC 1932959 28 100.0 32 ............................ ATGATATTGTGTTGATTCGTGCTTTGCTCACT 1933019 28 100.0 32 ............................ TGTTTACTTAGCACAATATCCCGCATGGTGAT 1933079 28 100.0 32 ............................ ATCAAACGCCACAGATACGGTCACATTGCGTC 1933139 28 100.0 32 ............................ ACGTTATACCCTGCTAACAATCGGCTAAAATC 1933199 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 32 28 100.0 32 GTTCGCCATCGCATAGATGGTTTAGAAA # Left flank : AGCAGTAAACCTAACATCAGTGTAAACCCAATTTGCTTTAGTAAATCGGCTTGCTTAAAGAGCGGGGTCTTTTTTTAAAACTCCATTTGATTCGACGTAAGGTTTCTAAAAAGGCGTTATAGGAAATATTGATATCAGGATGGTCTTTTAAGTATTGTTCTCTAAGTTGTTTTGCGGTGTCAAATTCTTGTGATTTAACATAGCCCTCAAAGGCGACTAGGTCAGTAATAATGTGTTTTACGCCAACAGCGGCAAAGGGTTTTGGCTTGGTATTCCCTTGTTCTTGATAGAGCTTTATCCAGTCATCAAGGGTGTTGCGGTTGATTTCAAATAGCCTGGCTGTTTGGCTTTTGTTGCCTGTCTTTTGCCAGTGGTTGACGGCTCTGTCTCGTAAGTCTTGGTTGTATATTTTGGGCATAGTAGTTATCAAAAAAATGTTTATTATATTACAGTTTTAACTATAGAAAGCAATGGCGCGACAGGGACGGTACTTTTAGGCT # Right flank : ACATGAGCTTGATTGATATTGTTCATGCACCCTACTAAATTTTTCTAGTATATATCTACTTTGCATTTTTTTCGTCAATATTTCTCATTTTTATACGAGATAGTCCTAATCTAAAGTTAAGGTAAGCAATTTAATATATTGAATTTTTGCTTATGTATTATTTTATTAGTATGTGGATTTAGAGTCGTACCGTGAAAACTCAAAACTTTATATAGTCCGTATAACAACTTTTGTATCTATTTTTCCAATCTCAAGACGGCTAACTAAACTAGTGTGTCAATGTCTTAAAGTTTCTAATAGCCATGTTTTTAATTTGGAGGGAATAACTTTGAAAGGATTTTTTTTAGGGCACGAAGGCTATTTAAAATAAGCAATGAAACTCAAAAAAAAATAATTCAGTTTCATCTCTTTTAAATTTGAGTGGGGGTCAAAATCTACTTGCTCAAAAATTAACCAAGGCACAATTTGGGCACACAAGATTTTTAAGCGATTTTTCTGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCCATCGCATAGATGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCGCCATCGCATAGATGGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 1960406-1960673 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024443.1 Moraxella osloensis strain NP7 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1960406 28 100.0 32 ............................ AATGGCGATAAATACACATGGTCAGGCTGTCA 1960466 28 100.0 32 ............................ GCTACCCAGCGGGGTTTTTACACTCTCGCCAA 1960526 28 100.0 32 ............................ ATCGCTCGCACAGTTTTAGAGGAAAAGTTTAA 1960586 28 96.4 32 .............C.............. GGTTGACATTAAAAATTCAAATACGCTCCAGA 1960646 28 78.6 0 A............C........G..TCT | ========== ====== ====== ====== ============================ ================================ ================== 5 28 95.0 32 CTTCACCGCCACATAGGCGGCTTAGAAA # Left flank : ACAGGTAAGGGTAAGAATCTGTACAACTCATTCCAATAATTTGTACAGATTAAGGTAGCAATCTGTACATATTTAAACGCTGAAATGCAGTGATATGGCGATATAGTGAATTATCTATAACTCTTATAATATTGATAACTCTTAAATCAAGATTTTTTTGATAATTAAAATCCATAACAACCAAATTTTAACAATTGACTAGATAAACACCCTAATATAAGTTATGAGATTAAATTTCTTCTAAACGTCACTACTTGTCGCTTTACTATAAATACCCTATTGCATTCATGAACATGGTTTGACAGACTAAAGAAAAATCAACTTATGTCATCTCTATCATGTCAAACGCCAATCCCTATACCGACAATAGCTTTACGTCTTCTGACTTAAAGACCATCCTGCACTCCAAACGTGCCAATATCTACTACCTACAATACTGCCGCGTCATGCAAAAAGCGGCTTAGAAACAATCAACAGCATTTAGAGCAATACCGCTTATT # Right flank : TTAATTAGTAAAACAGTGAAGTTTATTTATTTTTACTAAAGTAACCAAAAACAAGTGGGTGTGAAATTAAAAGTCTTAAAAAAATGCGTGGTCACCAAATGGTCACCTTTTGGTCACCATTCAATTTCTATAGTGAAAAAGGTGCCCAAAATCACAAAAGTGGTCAAAATTTCAACTCTCGAAAAACCACGTAAACACTTGATATCACTGCAATAAAAAAGCCCCAATCAATCGACTGGGGCTTTTGGAATATGGTAGGCATAATCTGACTCGAACAGACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTATATGCCTAAAAGGGTCTAACCATCTACTTGCGTAAGTAGGAGTGCCATTTTACCAAAAAATTTTGCTTTTGCAAGTGGTTTTAATTCTTCGCTTTAATTTTTATTGCGCCATCTTCAGCTAAGTTTTCGTTAAGGTTAGGTTGTTTTAATACACTCAGCCACTCGGATATACCTCAGT # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACCGCCACATAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTAACCGCCACATAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //