Array 1 450440-449344 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033058.2 Mycoplasma phocicerebrale strain 1049 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 450439 36 100.0 30 .................................... AAGGGTCTTCAATAGGTTCATCTATAACCA 450373 36 100.0 31 .................................... ACTATTCTTTGAATTAATTTAATTTTTAGAG 450306 36 100.0 30 .................................... GGTCAGGATAACTTATAAAAATTACAAAAG 450240 36 100.0 30 .................................... CATAGAAGTAATTATTAGGTTTATTATCAC 450174 36 100.0 30 .................................... TAAATCAAATTTAACACATATACCTACATT 450108 36 100.0 30 .................................... GATAAAATAATGCTAGATTTTGGGTATTTA 450042 36 100.0 30 .................................... CTTTAATCATTTGACTAAAACGAATATTGG 449976 36 100.0 30 .................................... AGCTTTTAAATGTTTTGAAAATAGTGATTA 449910 36 100.0 31 .................................... TAGCTTTATATTTTTGTAAAGTTGAATTTGG 449843 36 100.0 30 .................................... AAGCTACAACCTTGATTATTTAAAATATAT 449777 36 100.0 31 .................................... TAGAGAGGGTTTGATAAGAAAAATAATATTT 449710 36 100.0 30 .................................... AAAGATTTACATTAAAAGGACTGATTGAAC 449644 36 100.0 31 .................................... TAGCTATACTAGAACATTTTTACGATCCGGC 449577 36 100.0 30 .................................... TGGATTAATTCTTTTAAATTTTCTTTTTGA 449511 36 100.0 30 .................................... AAATAAATTATTTAGATATTAATATGTAAA 449445 36 100.0 30 .................................... ATATTGATCTTCCTAAAATAGAAAAACTAA 449379 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 17 36 100.0 30 GTTTTGTATTGCTTAAAAATAGTATAGTACTAAAAC # Left flank : AGTTCTTTTATTTTTTTATCTTTATCTGTTGTTGTTTCTTTTTCTTTAAGTTTTTTATTTAAATTCATTTTACATGGCCTTCCTATTTTTCTTTTAAGACCATTATAATCTAAATTTAAATATTTTTTTATTCAACTATAAATAACACCAGAATTTATGTTAAATTTCACAGCAATATCGTGAATAGAGCGACCAGTTTTAACTAATTTAATAATTCAAATTTTAAAATTAAAAGAATAGTTATTTTTTTTTGTTTTTGCTTAAGAAATCATATTTATGTATTTTATATAGAGATCTAATAGTCGCTATTGTAGTTTTGCTTACATTATACATTTCACATAAATCTTTAATGCTATAACCTTCATTTGAAAGTTTGATTATTTTTATTTTTTCTTCATTTTTTAATTTCATAATAAAAACCCCTAAAGTTATTCCGTTGTTTGGTCCAACTTTAGGGGTTCACTATAAACACCCATATGGTAAAACAAGAGATAACTACG # Right flank : GTCAAATTGTTGAAAAAATAAATAATTTGACGTTTTTTTTATTAAAAAAGTTGTTTTTTTAACATCAATTGTTTAAATTTGTCTTCTTTCAATATATTAAAATAATCATCATCAGAAAAATTGTTAAGTTTATATTCTTCCTCAAGCCACATTTTTATAGTATTAAAAGATTCAAAAGTAATTAATTTATTGTTTTTTTCAATAGAACAACATTCAATTTGATTAGGTTGGTCAATAATAGAAAAAATATTATTTGTTATAATTAAAAAATTAAATTTATTAATATATTTTATTAAAGTGCTGCACATTAAGTTTGTATTTTTTAAAATAATAAGCGGTTTAGTTGAACTATCAAAATTAATTAATCATTTTTCAAAACTTTTTATATCTATAAATGCATCTTCATCTATAGTTATTAAATTTTTTAACATTTTCATTTTATCTAAATTAATATCTAAAAAACTACTGTTTATTATATTATTTAATTTTTCTAATTCTTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGTATTGCTTAAAAATAGTATAGTACTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [85.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 2 452535-451968 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033058.2 Mycoplasma phocicerebrale strain 1049 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 452534 35 75.0 30 AA...CA..AAA......-........C........ ACTGGAGCTATAGCAATAAATTTAGCTTCT 452469 36 97.2 32 C................................... TTTTGTCCTAAATGACGTGCTAAAAATCGCAT 452401 36 100.0 30 .................................... GAATATGACGCTAAAATTAAGGATTGAAAC 452335 36 100.0 30 .................................... TATACAAAAATATATATGGACGTAATATTT 452269 36 100.0 30 .................................... TCATTTCATCATAAAGCTTGTCCCCGTATT 452203 36 100.0 31 .................................... AATTGACTTAAACCACCAATAATACTTAGAG 452136 36 100.0 31 .................................... TTATGAAAGCGTCTTGTGTAGTACTTATTAA 452069 36 100.0 30 .................................... ATAATTTAGACAACACCACAACTTCATTTG 452003 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 9 36 96.9 31 GTTTTGTATTGCTTAAAAATAGTATAGTACTAAAAC # Left flank : GTTTTGTTATCCCCGCTGTTTCCAATAAATCTGCTACTAGTTTCGCTGTAATAGGTTGTCTTCCTTTTGCTTTGCGATCTTGTCTAGCATAACCATAATAAGTTAAAACACAAACAATGCTTTTTGCATTTGCTCTTTTTAAGGCATCTACAAAAATCATTAAATCCATTAAATTATCATTAACTGGTTTACCAGTATTACAAATAATATAAACATCACGATTTCTAACTGTAATATTAGTTGATAAAATTCTTTCCCCATCGGCAAAAACAGTTTTATCTACTGGTTGTATTTCTTGTTTTATAAATTTTCCTATTTGCTTTGCTAGCTCTAATGAATTATCCATTCCAAATATTACAAAATCTTTATTATCTTTCATCTAAAATATACTCCTTAATCTTTTTTTAATTTTTGTTTTAATTTTATGTTGATTATTTAATTTTACTTTATTTTTTAATTTATTTTAGATAAACATATTCTAAGAAAAGAGAAAGATAAAT # Right flank : TAGGGTGAACCCCAAAAGTTGGACTAAAAAAATTATTTTAAATTATTAAGCGAATGGCATCTATATTGTTTAGGTGTCATTCCTCTTAATTTTGTTATTATTCTATTTTCATTATAATACTTTATATATTTGTGCATTGCGTTTTCTAATTCATCTAATGACTTAAATTCATATTCATGACCGTAAAACATTTCATTCTTCATTGTTCCGAAAAAAATTTCAATTATACAATTGTCATAACAATTTCCTTTTCGAGACATGCTTTGCAGAATGTTTTTTTCTTTTAGAATATCTCTATATTCTTTCATTTGATATTGTCAACCCTGATCAGAGTGCAAAATTAAACCATTTAAATTTTTGTGTTTTTTAAAGGCAATTTTTAACATATCAATAGTTTGTTTAAAATTTGGACTTCTTGATATTGTGTAAGATATAATTTCGCGACTATTTGCATCTATAATTGGTGATAAATATACTTTTCCAGAAGCAATATGAAATTC # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGTATTGCTTAAAAATAGTATAGTACTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA //