Array 1 1094177-1093021 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCR01000001.1 Parabacteroides merdae strain BIOML-A25 scaffold1_size1162278, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1094176 32 100.0 34 ................................ AACGGCGAGACTTAAAGGCTTTTTTCGCGATATT 1094110 32 100.0 35 ................................ ACAAGAGGAATGAGGGGCATTTGAGCCTTTAACCA 1094043 32 100.0 35 ................................ TATTCTATTGATTCTGGTCTGGAAGTCCCGCCAGA 1093976 32 100.0 35 ................................ CGAGTCCAGGCAATATCGCGAAAAAAGCCTTTAAG 1093909 32 100.0 34 ................................ AGAACGTATCTCTTGTTCGGCTGTTGCACATTTA 1093843 32 100.0 34 ................................ TGGATTAAACGAATCCAAACGACTACGATACATC 1093777 32 100.0 33 ................................ TGGTGCTCCTGCCTATATCACCAAATATATGGT 1093712 32 100.0 33 ................................ TCCCCTCTTGATAATATAAGCGCAACTGACATG 1093647 32 100.0 33 ................................ CTGTTTGGAAGGTTGGGGGAATGCTTTTGTTAT 1093582 32 100.0 34 ................................ CTCTATGAGTTGCTTGGCCATCTCATCCGATAAA 1093516 32 100.0 34 ................................ CGTGTTACCCATCAACACGCACTCATCACCCGCC 1093450 32 100.0 36 ................................ ATAATCGGGATATGCACATCCTGACGGATATCTTCT 1093382 32 100.0 35 ................................ TGAAAAGGATGTTGTAGCCTATGGCACGCAGGATG 1093315 32 100.0 35 ................................ ATTAATCTAAATCTAAAAATCGCTGGGCGGCTCAC 1093248 32 100.0 33 ................................ CGAAATACAATGAGGCAACCTGTTGGTGTAACG 1093183 32 100.0 33 ................................ AGTTAACACCTCTACCGGTGTGTTAGGGTTCCC 1093118 32 100.0 34 ................................ CTTTGAAGGGTTGGAAGATAGCAGTAAGCCGTCC 1093052 32 93.8 0 ...A.......................A.... | ========== ====== ====== ====== ================================ ==================================== ================== 18 32 99.7 34 GTCGTACCTTATATAGGTACGTGGATTGAAAC # Left flank : TTTAGATAATTATCCGGTCTTTTTAATGAAGTAAGTTTATGTATGTTCTAGTTACATATGACGTAGAAACGATGACTTCCGACGGACAGCGCAGGTTACGTCAGGTAGCACGTCAATGCCTGAATTATGGCCAACGCGTCCAAAATTCCGTTTTTGAATGCTCTGTCTCGCCTGCTCAATTTACCGAGTTAAGATTAAAACTATCGGATATCATCGATCATAAAAAAGATAGTATTCGTTTCTATTTCTTGGGAAATAATTATTCTAAAAGAGTTGAATACATAGGTGTCGTCACATCCTATAATGTAGAAGATGAACTTATAATATAACTGTTTGCGAACATTAAGCATTAACAAAAAGCTGGAGTTTTCGCAATCATTGATTATTAGCCTATTAAACACTCCTATTAGTTTTATTTCATCAATAAAAAATCCAAAAAGTTTATTATCGCATAAATGCATTGATAACAGACTGTAAATGTTTGCATTATTTGTAATGCA # Right flank : GAGTAAAACATACCTGCAGTCGACACAATTTATTAAATTATCAATTTCATTATTTTACCATGCAAGACAGAACTGCTCCACCCTTCTTCTTTACACGCTTTTGCATAATCGTCACGATGTAACTTATTATCTATCAGAAACAATTTCAAAAAATGAGTCCAAGTAAGCTTTTTCGATAAATCAGACACTATTTCAAGTTCTGGAAAATATACGCAGAACAACTCCATTTGAAGCAAGTGTCTAACTTCAAATTCTTTACCATAACGTTCCACTAATTCACGAGAAAGATATTTAAATGTATCTATCCGATGATATGATAAAGGGACTGCCTCACATCTGAAGACAGCCCCTTTCAATTGACTTACACTAATAAAATAAATTAGCTGTTTCAACCCACACACCCCGCAAGGTATGACAAAATACCTTGCAAAGGTAACAATCCAATCCTATTTACACAATCACCCTACTTTTTATTCTATCAGCAACAGTTCTTCCACCCA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTACCTTATATAGGTACGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //