Array 1 6196193-6196700 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034354.1 Pseudomonas aeruginosa strain IMP-13 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 6196193 28 96.4 32 .G.......................... AGGATGTCGCAGTCCATCAGCCGCTTGATCCC 6196253 28 100.0 32 ............................ GCCATAAAGGATTAGGTAGCGCCCGACATGCC 6196313 28 100.0 32 ............................ ATTGTGGGTCGCCAGCTGCAGACGTTCACGAC 6196373 28 100.0 32 ............................ AGTGGGAAGCCATGGTGGCAGAGTCTCAGAAA 6196433 28 100.0 32 ............................ GATCAGGCTAGCCATGACGGGCTCCATTACGC 6196493 28 100.0 32 ............................ ATCATGACCCAGTTCAACATCATCACCAGCGA 6196553 28 100.0 32 ............................ ATCAAGGGGCCGAGCGTGCCGCGCAGCCTGCT 6196613 28 100.0 32 ............................ AGGAGTACATGCCGAGGGCGTCTGTGACCATA 6196673 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 9 28 99.6 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGTTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGGGTTTTGGTCTA # Right flank : ATCGGACTCAGGCGGACTTGCGCCAGGCTGACCTGCCCCCCGATTTCAGTACCACGTCAAACTTAGTAGAGTCCGTTTTCCGAGCAGGAGACGGCAGTGAAAAAGCGTTTTACCGAAGAGCAGATTCTCGACTTCCTCAAGCAGGCGGAGGCCGGTGTGCCGGTGAAGCAACTGTGTCGCCGACACGGCTTCAGTGATGCCTCGTTCTACACCTGGCGGGCCAAGTTTGGCGGTATGACCGTGGCGGACGCCAAACGGTTGAAGGATCTTGAACTGGAAAACAGCCGATTGAAGAAGTTGCTCGCCGAGGCCCACCTCGACATCGAGTCGCTGAAAGTGGTCGCCCGGGGAAAAGGGTAAGCCCGACAGCACGGCGGGAGGCGGTGCAGGAGATGCAGGCGCGAACCGGCATCTCCGAGCGTCGTGCCTGTCAGTTGATCGGGCTGTCCCGCTCGGTGTTGCGCTACCAGCCGCGAGCCAGTGTGCAAAACACCGAGCTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 6197980-6198554 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034354.1 Pseudomonas aeruginosa strain IMP-13 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6197980 28 100.0 32 ............................ TTTTCGACCGACGCGATGGCACAAGCAAACCT 6198040 28 96.4 32 .............C.............. ATGTAGTTGCCCTGCATGTTGATTTGCGTGGC 6198100 28 100.0 32 ............................ TATGACCCGTCGTACGACTACGCCTCGAACAC 6198160 28 100.0 32 ............................ AATTCACCTGCTGCGGCATTCCGAGCGACAAC 6198220 28 100.0 33 ............................ GGTGTGTGCGGCCAGCTCGGACCCGAACTTGAT 6198281 28 100.0 32 ............................ GTTTGCAGGAAGCGGCGCTATCGCACCGAACT 6198341 28 100.0 32 ............................ ATAAACTTCGGTTCCGTAGAGCGCTTCTCCGG 6198401 28 100.0 32 ............................ ATAGCTACGCCGAGCCAGTTGTAAGCTGACGC 6198461 28 96.4 32 ........................A... TGTCCCGAAGTTCATAAGCGGGCTTCGGGCGA ATAGGC [6198473] 6198527 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================= ================== 10 28 96.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : ATGACTTCACCAAGGAGTCGGTCGGCATCCTGGTGGAGCACGGTATCAGCGGCTTTCGCGTCACACGGGCGCTGGACGAGATGGCGCGGTTTCGCGGCTACCCGAAAGCGATCCGCACCGACCAGGGGCCCGAGTTCACCGGCAAGGCACTCGATCAATGGGCCTATCAGCGCGACATCAAGCTGAAGCTGATTCAGCCTGGTAAGCCCACGCAGAATGCCTTCATCGAGTCGTTCAACGGTAAGTTCCGGGACGAATGCCTCAATGAGCACTGGTTCTGTTCGCTGGCCGAAGCGAGAATCCGCATCGCGGCCTGGCGGCGGGATTACAACGAACACCGGCCGCACAGCGCGATTGGCAATCTTACCCCGGCAGAATTTGCTGCAAGTTGGCGAACTCGCCAGCAGCAGCTGAAGCAGGAAAAATTAATATCAACCCCAGGGCCTACTAACTAGGCAGCGGTACTAAAGCTGGGGGCAGGTCACAGGTCAAGGCCATGC # Right flank : ACGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATGAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCACCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGCTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGACGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGGTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCT # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 6208309-6207078 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034354.1 Pseudomonas aeruginosa strain IMP-13 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6208308 28 100.0 32 ............................ ATATCGTTACCACCTTGCCGAGGATCGAGAGC 6208248 28 100.0 33 ............................ TGCACCAGACCGCCACCAAGCTGCACGCTGCGT 6208187 28 100.0 32 ............................ AGCAGGCGCCATGCGCGGGTCCGGCGGTGGCC 6208127 28 100.0 32 ............................ TGTACAAAGGCGTTTACCGCAGAGTTGATTCC 6208067 28 100.0 32 ............................ AGTTGCTGCTCGAACAGTGTGAGCCAGACGTG 6208007 28 100.0 32 ............................ TGGCCCAGGTAGGTGGCCCAGTCCTGACCCTC 6207947 28 100.0 32 ............................ TGGAAGTCCCGCACCGAGATCGAGGCGTTCAT 6207887 28 100.0 32 ............................ GATCTGGGGCGGCATCATCACCGCAGAATCTA 6207827 28 100.0 32 ............................ TAGCCAGATTGCTGTGCGGCGACGGTTCATTC 6207767 28 100.0 32 ............................ TGACTCTGCACGGTGTCGCAGATTGACACCTC 6207707 28 100.0 33 ............................ AGGAACACGCTCGAAGTGTCCAGCACCCTTGGC 6207646 28 100.0 32 ............................ ATCAATCGCTTGATCCCGTCTCGCATGAATGT 6207586 28 100.0 32 ............................ AGTGCGGTCAGACCATTCACGCCACACTTGCT 6207526 28 100.0 32 ............................ ACCCTTGCGCGCAGTGCTGCGACTTCCTCCGT 6207466 28 100.0 32 ............................ ATGGCGTGCAGATCGTCGAGGAACGGCTGCAT 6207406 28 100.0 32 ............................ TGGGCGAGATCGGCGCGTAGCCGTAAGGCGAG 6207346 28 100.0 32 ............................ TTCCCCGGCGAGATCCAGCCGCCCCAGGACGG 6207286 28 100.0 32 ............................ TCTTTGCAATCTACAACAACCCTGATCGACGA 6207226 28 100.0 33 ............................ TCGGGGCATGGGTCAGCCTCGCCGCGGTGCCGT 6207165 28 100.0 32 ............................ TCCAGTAAGGCCAGCTCGGTCACGCGCATGCC 6207105 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 21 28 100.0 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCCTGTACGTAGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGTAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGAAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : CTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCACTACCAAACATCCGAATATAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAGCATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //