Array 1 1541-187 **** Predicted by CRISPRDetect 2.4 *** >NZ_QXWC01000083.1 Vibrio cholerae strain VcCHNf3 Scaffold83, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1540 28 100.0 33 ............................ ACAACACACTAAGTCTCCAAGCTCGACCAGTCG 1479 28 100.0 32 ............................ TCAAGAACACGGAAACACTCTTTAAACATCGC 1419 28 100.0 32 ............................ TGTCGCCTTGGTTAAAACTCAGAGAATCAATA 1359 28 100.0 32 ............................ AATACTGAAAAGTTAACGCGATAGTACGTTTT 1299 28 100.0 32 ............................ ATCAAACGCTATGATGATGATTCATAATCCAT 1239 28 100.0 32 ............................ GTCTTGGATGTCCGCAAGATCTTTTGAATCCT 1179 28 100.0 32 ............................ AGCATTGAAGGCAGCGCGTCAATAACGGTTGG 1119 28 100.0 32 ............................ CAGGGCCTATCAAACCGATCTGCAATCGGAGC 1059 28 100.0 32 ............................ AGGCAGAACAAAGATTACTGGATGCCGGATGT 999 28 100.0 33 ............................ AATCGGATAAAGGCTTTCAGTTCTTTGTCACTC 938 28 100.0 32 ............................ GCCAGAGCCTGAATCACTTAATTTATTAAGTA 878 28 100.0 32 ............................ GCTCGAAGGCACGATAGTAGAAATCGCTTTCG 818 28 100.0 34 ............................ CATTAAGCGAGCTATTCCTTGAAGCATTTTCTTT 756 28 100.0 32 ............................ ACCCGCTTTACGGCCAGTGTAAAGACCGGACA 696 28 100.0 32 ............................ TTTATGTCCCAACTTCTAACTTGCTTGGAGTT 636 28 100.0 32 ............................ GATCAGTATCGAGCACCCAACAATGGCGGATA 576 28 100.0 33 ............................ ATTGCCTACCTGATGTCGGGATTGGGTGTGTTT 515 28 100.0 32 ............................ CTGCGGTATAGTCATCAGTAACGCCGCGGGTA 455 28 100.0 32 ............................ TCTTGGCGCTTTAATTGTCATTGATGAATGCC 395 28 100.0 32 ............................ GTCAATTGATTTAGATATGTATTTAGCAATGT 335 28 100.0 32 ............................ AATTTGCAGCGCGCCGCCCTCGGTGAGCGTTG 275 28 100.0 32 ............................ CTAACCGTTAATCAACTCAAATGACGCAATCT 215 28 100.0 0 ............................ | A [191] ========== ====== ====== ====== ============================ ================================== ================== 23 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GTAATGCGTTGCCAGCCCCTTAGGCGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTTTATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCAT # Right flank : ATTGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTAAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCTTTGATTTTATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCGGCGTTATATTCTCCCTCGCCCCGTAAACTTTCCGTACGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //