Array 1 47177-47475 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QEPU01000004.1 Aggregatibacter aphrophilus strain C2008000870 C2008000870_S16_ctg_1220, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     47177	    32	 100.0	    34	................................	AGATATTTTTTGTGTTTCTGTACATAACAATAAT  	
     47243	    32	 100.0	    34	................................	GAGATTTTCCCGTTGTGCACCGCAGATAAAACGG  	
     47309	    32	 100.0	    36	................................	ACCCATTATGCGGCCGAACTCTCCCCATCGTCGCCA	
     47377	    32	  90.6	    35	..C.....C......T................	GGCAAAGGCCACGGACAAGCAAAACCGATTGAACG 	
     47444	    32	  90.6	     0	......A.C..T....................	|                                   	
==========	======	======	======	================================	====================================	==================
         5	    32	  96.2	    35	GCAGCCGCTTTCGGGCGGCTGTGTGTTGAAAC	                                    	       

# Left flank :   TTGATGAGATAAGTCATGTTAATGCTAATTACTTATGATATTTCTTTTGACGATCCAAATGGGCAAGCGCGATTGCGCCGCATCGCAAAACATTGCTTAGATTACGGCGTGCGGGCGCAATATTCGGTATTTGAATGCGATGTCACGCCTGACCAATGGGTTATGTTGAAAAACAAACTGTTGGAAACCTACGACCCCACGTGCGACAGCCTGCGTTTTTACCACTTGGGCAGTAAGTGGCGCAATAAAGTGGAGCATCATGGGGCAAAACCGGCAGTGGATGTATTTAAAGACGTGCTTGTCATTTAGTTCGCTAACCTGTTGTTCTCATTAAAACCCTGATGGGATAGCGATCCTTATTTTCTTTAACAATTTGGATGAATTAATCTATTTGTATAACGACAATGTGGCCGTTATACTTACCAAACTCCTTATCATAAAATCAGTTAGCGAAATACAGTGTTTAATCTGCTGATTTTTCTTACTTTTTTAGGTAGGGA
# Right flank :  CAAGATGTCGAGCAAGTCGTGCTCATTTTGTGCGGTGGCAGCCGCCTTCGGGTGAGTATATATTCTATCTTTATGAAAAATAAGTGATATATAAGTTTCAAGCCTTTCTGCAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTCGAGATTCAGCTTTTCTTTTGGGGTCAGATTATTTTAACCGCTCTTTTTGTTGACCTATGCTGAAATATTATTACATTTTCGGAATTTCAACGCCTGAAGAGAGTAGGTCTTGAATATCCGATTTCAATACATCAGCTTTTGGCCCGTAAATGGCTTGAATGCCTGTGCCTTTGACGATAAAACCCATTGCGCCTGCTTGTTTCCAAGCCGCTGCATCGCCCACCAGCTCAGGGTTGTGAACGGTGATACGTAAACGGGTCATACAAGCATCTACCTCAGCAATATTGTTGCGTCCACCCAGTAAATTTACGATTTGCACTACTTGCG

# Questionable array : NO	 Score: 5.87
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCAGCCGCTTTCGGGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GCAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.90,-2.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [68.3-46.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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