Array 1 116122-117141 **** Predicted by CRISPRDetect 2.4 *** >NZ_VULT01000002.1 Sodaliphilus pleomorphus strain Oil-RF-744-WCA-WT-10 seq2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================== ================== 116122 37 94.6 27 ...............A.............T....... TTGACCAACTCACCGACGTGCCAGCCG 116186 37 94.6 30 ...............A.............T....... TATTCCTCGCGCTGTTTTTCCGCCACCATG 116253 37 97.3 27 ...............A..................... CCGCTGCGACACCGTGCACAGCAACAA 116317 37 97.3 30 ...............A..................... CACTTGTATGCGTAAATGCGTAAACGCTTG 116384 37 100.0 28 ..................................... CGACTTGTACAAGCCGCGTATCGTGTCG 116449 37 100.0 30 ..................................... GAAAGAGCGCGGCGGCTGTCTCTCTGATGA 116516 37 100.0 28 ..................................... ATGCAATATTCGACGCCCTGTGGACTCG 116581 37 100.0 28 ..................................... GCGAACTTCCACAGGGAGTAATCAGCGA 116646 37 100.0 29 ..................................... AGAACGACTTCTTTCTGTCGCAGATAAGC 116712 37 97.3 30 T.................................... TCTGCGTCCCTCTTTTTTGCACAATTTTAT 116779 37 100.0 29 ..................................... GAGGGCTTGAGCTATGACTATGACAAAGC 116845 37 100.0 29 ..................................... TTTTCGGCAGAGGCCTTTAGCCTGTGCCG 116911 37 94.6 29 ......T........A..................... TGAAGTGGTAGGGTCTGCCATAGTTTTTG 116977 37 91.9 27 ......T........A.............T....... TGGCTGCTGAACGATAAAGATGCATAC 117041 37 94.6 27 ......T........A..................... ATTTCTATGCGCCAAGCCCGTGAGGGT 117105 37 81.1 0 ...C..T.....T..A.G.................TG | ========== ====== ====== ====== ===================================== ============================== ================== 16 37 96.5 29 GGCTACATAAAGCCTGTAATTTCTACTATGTGTAGAT # Left flank : CGTTGTTTTATGGGAAGGAAGTCTGCAAGTCAATATCCAATATTTCAATATAAATGAAAATTATTAGTTACGATATCGGTGATGATCGCTGGAGGGCTCGATTTACACGCATGCTTGTAAAGCACGGAGCCATTAGATTGCAATATTCGGTATATGAAGTTGCCAACACTAAAAGGGTGATGGATAATCTTACAGCCAAAATTGAAGCCTGGGCCAAACATTTCACTCTCGATGATAGCGTGATTATTTTTGATGTAGATGAAAACAAGATGATAAAATATGGCAATGCCATACATCGCGACAAACCTGTAGTTTTTTTATAGGTTTACAAACCTAAGTGTGTCGCGTTTTACTTTTTTCTCCTCATTTTATTGTGAATCAACTATATGAATATATGGCTGTTCAACTTGCGTTTACGGGGTGGGGGTAAATTCTTTAAAAGAAAGGTTTTCTACTATTGTGTATATCAGTGATTTTGTTTAAATTCGCCCCTTGTAAGA # Right flank : GTATAGACTATATACTTGAATGGTGTTGGGGTGTAGTTGATGCAGTGCCTTGCCGTGCAGGTTGTAGGGGGTGGCGTTTTTGGGCGGGGATGTGATGATATGCCAAAAAAATGGGCGGTTTGGTCGATTTTGTTTTGTGCTTGAGGCTTTTTCGTGTAACTTTGCCACACGAAATGAGTGTAGCAATCATCAAATACAATGCTGGCAACGTGTTCTCGGTGAAATGTGCGTTGCAGCGCATAGGCGTGGAGGCCGTGATCACCGACGATGCCGCTGTGCTACGCCGCGCCGAGCGGGTGATATTTCCCGGTGTGGGCCAGGCGGCCACGGCCATGGACTACTTGCGCGCCAAGGGGCTCGACACGGTGATAAAGAGCCTCACGCAGCCGGTGCTGGGCATATGCATAGGCCTGCAGCTGCTGTGCCGCTCGAGCCAGGAGGGCGACACGCAGGGGCTGGGAATATTCGACCTCGACGTGAAGCGCTTCGACAACAGCGCC # Questionable array : NO Score: 2.74 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTACATAAAGCCTGTAATTTCTACTATGTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 155710-156548 **** Predicted by CRISPRDetect 2.4 *** >NZ_VULT01000005.1 Sodaliphilus pleomorphus strain Oil-RF-744-WCA-WT-10 seq5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 155710 37 100.0 35 ..................................... AGTTGTAGTTATTGCATACCAATGATTTTTTATAG 155782 37 100.0 37 ..................................... CCTTTCAGGTTTGGGTGATTCACTGCATAACAGTGAT 155856 37 100.0 35 ..................................... TACCAGTCATTGCTCTTGCTTTCAACACTTGTGAT 155928 37 100.0 36 ..................................... TGTATTAGCTCTTTTAAGGTAACTGTATAGTCATAG 156001 37 97.3 36 ..................T.................. ACAAACATGATTTTTTAGAGCATATTTCGTCATTTT 156074 37 97.3 37 ..................T.................. CAATTGCAAAATTGTAGATTGTTTCTCCCTTGGCAGT 156148 37 97.3 37 ..................T.................. TCCATGTAGTTGGCTTCACGGGTTTCACCACTTGTAG 156222 37 100.0 37 ..................................... TGGTGCGAGTACCGTCAGCCTCCACAATGGCGAAGTT 156296 37 100.0 35 ..................................... TGAAGAACTTTTAATGTCTCATTGAATTTCTCTGT 156368 37 100.0 35 ..................................... AGGATCCCAGTTACAATCTCACCAGTTTCTTTACT 156440 37 100.0 35 ..................................... AGCCATTTTAATCTTATACCAGCATTGTGAAGCCA 156512 37 89.2 0 ................................GG.GG | ========== ====== ====== ====== ===================================== ===================================== ================== 12 37 98.4 36 GTCAGAGACCATATTCCACTACAACAAGGATTAAGAC # Left flank : AAGTCGAAGATGATATTGCAGGTGCACGACGAGTTGAACTTCGACGTCGTGCCCGGCGAGCTCGAGACGGTGCAGCGCATCGTGGTCGATGAGATGGAAAATGCCTATCATGGCGATGTGCGCCTCACGGCCAGCCACGGTGTGGCCGGCAACTGGCTCGACGCGCATTGATGCACCAGCCACGCCCTGCCGTGGCACTGCAGTGAGCAAGCCTGAGTGTGCACAATAGTGCCGCAGTTGCAGCGTTGGCAACCTGTGGAGAGATGCGTGACGATTGCGGGATACTGTTGATTGCCAGCACTATAATGTGGAACGCAGTGAGCAGTGTTTAGCAATAGTTGAGTTTTATAGGAATTTAATATTATCGCTCTTTGAAATTTTGCCACGAATGTTTAATTTTGCACTCGCTTAAAAGAGCGCTAATTTTTGTTAATTTTGAAGGTGCAACAGCTTTTTGAGTAGCGTTAAGGCTTGGAAAACAGTGCATTTCATTTTTAACG # Right flank : GGCTGCGTCGTAAGCATCAATTACGACGCAGCCCCCCTTGCCGTGCCCGCCACCATGTTTAGGCGAGCCCCGCCGTGGTTCAGTACATTATATAGCGTAGAGGAAATCGTTTCTCATGGCGCAGGGGCAAAAAAAACAACGGGAGGCAGCCTTGCTGTGAGGCTGTCCTCCCGTTGTGGTAGTGATGGGTGCGGGCTGTGGCGCCGCTATTTCACCACCCGGGCCGGGTCGATGTTCTGCGGGTTGAACACGCGCTGCGGTCGCTCGGCGTTGCCGCGAGCCTTGGCTTTGTCGCCCTTGGCGGCCGGGGCATAGTAGTAGTTCCAGCCGGTGCCCCAGGTATAGCTGTTCCAGTTGGGCGAGCTCGTGTGCACCAGGTCGAAGTTGCGGTCGTTGTCGCGGTTCCAGTATATCGTGCCCGTGAAGTGGTTGTCGTTGAGGTGGTAGCGCTCGATAGAGATGGTGTAGTTGTCTTCCTCGAAGTGGATGCTGATCACCCC # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAGACCATATTCCACTACAACAAGGATTAAGAC # Alternate repeat : GTCAGAGACCATATTCCATTACAACAAGGATTAAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //