Array 1 753440-754481 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGTM01000002.1 Prevotella denticola strain NCTC13067, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 753440 37 97.3 41 ............A........................ GCCATTATGTATCGGCAATTATCTGACGCTCGATGCGCAGA 753518 37 100.0 35 ..................................... AGCGTGGTAGCTATGTTTCCGACACAGCAAGATGT 753590 37 97.3 34 A.................................... CAAATCTCGGTACAAAACGTGAAAGCATTTATCA 753661 37 100.0 37 ..................................... CACGCCTGGAATCACGCTTTTGGCGTGAGGCTGTGAA 753735 37 100.0 35 ..................................... GCACGGCAAATGTTATTAATTCATTAAAATTTTAC 753807 37 100.0 37 ..................................... ATGCTGTTAGGCTAATAGTCTAATGTGCATACGCTTT 753881 37 100.0 34 ..................................... AATCATGACGACATTTAAGAATTACACACCCCAT 753952 37 100.0 34 ..................................... GTATTGAAAAATCTGAATGGCTTAAAGCAGCCAA 754023 37 100.0 36 ..................................... TTATTCCGGAACCGAATACTGCTGCTCCGATGAATG 754096 37 100.0 35 ..................................... TAACAGATAAGAAAAACAAGGTCGTTATAACATTT 754168 37 100.0 40 ..................................... TAGTCAATCCGAATTTACTTCGCATTGGTCTGTTTGGGCG 754245 37 100.0 21 ..................................... CAGCTTCTCCTGCCGGCCGGC Deletion [754303] 754303 37 70.3 32 CATCCGGC.GCA......................... GGCTTGCGAACCGGTCGGGAATCTCCACGCCG 754372 37 100.0 36 ..................................... TCATTTTCATGATGGTGAATTTTTGCCTTATCGTTG 754445 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 15 37 97.7 35 GTCTTAATCCTTGTTTTAATGGAAGATACTCATTGAG # Left flank : TTCTCCGAGATAGTCTGCCCCGCAGCCGGCATCACATCATAGAAAAAGCCGTTCTCCACTGCCGGACCGAAGCCGAACTGAATGCCCGGATAGAGTTCCTGCAATGCCTCGGCAAGCAGATGGGCAGAGGTGTGCCAGAAAGTGTGCTTGCCTTCTTCGTCATCGAACTTGTACAGGGCAATGGTCGCATCTCCGTTGATGGGACGGTTCAGTTCTGTCGTTACGCCATTGACACCGCAAGATACAACGTCACGGGCGAGAGCCGGCGAAATACTCTCGGCGATTTGATAACCAGTCACACCCTGTTCGTATTCACGAACGGAGCCGTCTGGGAAAGTGATTTTAACCATACTACAAATTAGTTTTATAAATCAAATGTTGTGGCAAAGGTACTACTTTTAATTTATAAATCATAATTTTTTTGCCCCCAAAGGCTCTTCTTCCGAATCCTTGTTCTAATATTGAGTGAAGGTTGAGGACGCAAAGCGAATTCTTGCAAA # Right flank : GTACGATGTGAAATCGACTTCATTGATTATGTTGTACCCGTTGGCGGAATTAAAATGTAGCTATAATGATATACAAAAAGTTGCACATATCGTTGATTTTTAGTAACTTAGTGAAGTCAAAACCATTAAGTACAAATCCTCGTATGTGCAACTTATACACAAAATTCGTCAAAATCCTTGAGATATGCAAGCAATTCTCTCACAACCTTGTCAATGAGCAGGGAAATATACCCCGTCGTGGTCCCATGCCAAAATTTTCAGATTTGGAGGTCGTTGCCTTGTCCTTGACAGCGGAATCAGAGAGCATTGATAGTGAAAAATGGCTTTTTGATTATAAGCTTCAGGAGTACAAAGACAAAATACCTAACCTCATATCTCGCAGGCAATTCAACGACCGTAGAAAGAATACCGCAGGATTATGCGAAGACATACGAAAGAGAATCGCTGCCCAAATGGACGGTGGGGAAACTCAATTCTTCGTAGATTCCAAGCCGATAGCC # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTGTTTTAATGGAAGATACTCATTGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 758622-755552 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGTM01000002.1 Prevotella denticola strain NCTC13067, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 758621 37 100.0 34 ..................................... TGTATCGTATACAGCTTTCTGTTGTACTCTTTGA 758550 37 100.0 39 ..................................... AGGGCGGCGGCCCGGAATTTATCTTTCTCTTCCGCTTCC 758474 37 100.0 35 ..................................... TTCAACCTTCAAATACTTGAATGTGAACCCGATTG 758402 37 100.0 35 ..................................... ACCACTTATCCGACACGTGCAAACATTTCAAAGTA 758330 37 100.0 34 ..................................... GACAGGGACACCCACGGGTCATTCCATGACAGCT 758259 37 100.0 38 ..................................... TATGTGAAAAATGCAGTTTTTGCGCTAACTTTGCTACA 758184 37 100.0 38 ..................................... TGTATCAAGAACAGCAGGATTAACACGAGACAAAGGAA 758109 37 100.0 36 ..................................... CGATAGGTCAGCTTTAAGTTAAAATTATTTCGGGCA 758036 37 100.0 36 ..................................... GCACTTCCTTTGTACGTACCCTTGACTTGGGGTTGG 757963 37 100.0 36 ..................................... ACCTGACAGTAATATTGAAGGTTGTCCTCCTTCAGG 757890 37 100.0 34 ..................................... AATTTCCGTCGCCGTCGTACCAGATGAACTCGTT 757819 37 100.0 34 ..................................... ACACTAAAATAGCTGCTTGCAGCACGTATATCCT 757748 37 100.0 38 ..................................... TTATTCATCAAGCCCCAAAGATTGTAAGTACTCGTTAT 757673 37 100.0 36 ..................................... CCGGCCTCTGCCCTCCCCTCCCCTCCTTTCGGAAGG 757600 37 100.0 37 ..................................... GCCTTTCTCTTACGAGGTTCTGCAGACATCTCAGGTC 757526 37 100.0 38 ..................................... AAGACATTGCCCTGCCTATGCTGCCCAGCCCCCGGCTG 757451 37 100.0 38 ..................................... GGACGCGGATGCGTCTCCCATGCGGAAGAGGCATACGG 757376 37 100.0 33 ..................................... GTAGGTTTTGGCTTTTTATCTTGCCACACCTCA 757306 37 100.0 33 ..................................... CTCTACCGTAATCTCCTTGCCCTTCTTCAGCAG 757236 37 100.0 38 ..................................... AGGCGGCAGAGCTGAACCGCTACGCTACAATGTGCTGT 757161 37 100.0 36 ..................................... TCTTGTTGTTTTTGAAGTTTATATTTATTCTGGGCA 757088 37 100.0 36 ..................................... AATGTCATCGCCGGCACTTCATGGGGCCGCATCAAG 757015 37 100.0 33 ..................................... CGCCAATCCTTGTTTTTTTCGCATGTTAAGATG 756945 37 100.0 39 ..................................... ATATTACTTGTGCCCTTCTTATGTAAAATCCATAAAGGA 756869 37 100.0 35 ..................................... TATGTTTATTTTCATTTTGGGTTATTTGTTTAATT 756797 37 100.0 34 ..................................... GTCAAAAACCAACTTGGAATTTTTCAAATTCTGC 756726 37 100.0 33 ..................................... TTTAATCATATTACTTTAAATAAGTTTGATACT 756656 37 100.0 34 ..................................... CATCTGGTAAAATATCATTGATAGATTCTGATAT 756585 37 100.0 35 ..................................... TATGTTTATTTTCATTTTGGGTTATTTGTTTAATT 756513 37 100.0 34 ..................................... GTCAAAAACCAACTTGGAATTTTTCAAATTCTGC 756442 37 100.0 33 ..................................... TTTAATCATATTACTTTAAATAAGTTTGATACT 756372 37 100.0 34 ..................................... CATCTGGTAAAATATCATTGATAGATTCTGATAT 756301 37 100.0 35 ..................................... CTAACAGCATAGGTGCATTACTGTGGTCTATAAAA 756229 37 100.0 35 ..................................... CCATATTAATTGCAATTTATGGATTACCGAAATCA 756157 37 100.0 34 ..................................... CAGCTTGTTGCCTCTTTCGAGCGAGTGCCTACCA 756086 37 100.0 32 ..................................... TTTACAAAATATCTGTTCACTCGCATGGTCGC 756017 37 100.0 38 ..................................... ACCATAAAAAAATTGAAAATCAACTAAATACTTAATTA 755942 37 100.0 27 ..................................... AGCGCATTTGAGGGCTTCTGACATCGT Deletion [755879] 755878 37 100.0 36 ..................................... TTGCAATTTCGTTCAGTTTCTTCATAAAATTGACTT 755805 37 100.0 35 ..................................... TTTCTGTCTGCGTACGGACCGGCGGGAGGTCATAC 755733 37 97.3 38 ..A.................................. TTGCAAGAAAAACTTGGAGGCAAAAAACTCGCAATGAA 755658 37 100.0 33 ..................................... CTGAATAGAAGATCGTATTAAGGGAATTACCAA 755588 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 43 37 99.9 35 CTCAATGAGTATCTTCCATTAAAACAAGGATTAAGAC # Left flank : AGCGACAAGGTACGCTATCATATCGCAAAATACCTGGAACGGAAAGGATGCACACGCATCCAGCGTTCCATCTTCCTTGCCGACCTCGACAAGACCGTCTACGATGAAATTAAAAGCGACCTTGCCGAGGTGCAGTCGCTTTACGACAACCACGACAGCATCATCGTCTGTCCTATCTCCACCGATCAGATCCGGGCAATGCAGATCATCGGTGAAGACATCAGCATAGATGTCATCATCCGTTCGCGCAACACATTGTTCTTCTGAAGACGGCAGCGAGAATGCCCTCCACATGAGGGAAGAATGTCCTCCCCATGAGGGAAAGCAGCAGCAATGCTTCCTCCATAAAGAATATTTAACGCATCGATCTTTGACTTTCTGCACAATTTTTCGTACCTTTGCACTCGCTTGGAACATGGTTAATTTCTCTTAATTCCTCAAGCATTTTTAGGTCTTACACGCATGAGGCTGCGGCATATAAAGGAATACAAGTCTTTACT # Right flank : ACAACATAACCCGTTGGCGGAATTAATTTAGTGCGTATTTAATTCTTCCGATGGGTTTGTTATTAATAAAGTTGACATATTGTAATATGGTCAGCGCACTAATTTTCCCGATTATTCGGGCAAACAGACCATTTGTTATTTTCGCATAATTCCTGATAACCAAAAATTGATCTGTGAGTTGTGAGAAGAGAGTTTCAATCCTTTTTCTGGCTTTGGCAAAAGGGATTAATTTTGGTTTCCAATTCTTTTGGTTCAGCCTATATGGACATTCCAATCTAATGTGAGCCGTTTGGAAAAGATCGAGTTGAACATCAGCCCCTATATATCCCTTGTCGCCATAGATGTTACAGTCATGATAGACCAGCTTGACATCTTTCATATAATTGAGGTCATGCACGCTGGCCTTTGACAAGTCATAGGAGTGTATCACCCCACTTAACCCACAGAGTGCATTGAGTTTATAGCCAAAGTAATACATATTTTGAGATGCACAGAAGCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCAATGAGTATCTTCCATTAAAACAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 3 875520-869631 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGTM01000002.1 Prevotella denticola strain NCTC13067, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 875519 47 100.0 29 ............................................... TAGGAACAAATTCAAACGAGCCTGTATCG 875443 47 100.0 30 ............................................... CCGTCTCATCTTTTTCCTAATGTGAAGAAT 875366 47 100.0 30 ............................................... GATTGTCAGCTGTATATGACTTCTCGATTT 875289 47 100.0 30 ............................................... AGATCCTTGATAAAATTTTGTCCGGTGATG 875212 47 100.0 30 ............................................... GGTTTTTCTTTAGACCCTTTGAACAATAAT 875135 47 100.0 30 ............................................... ATTTTTTGATTTTAATGACCTTTTCGATTT 875058 47 100.0 30 ............................................... TACTCCCGCGAAGTTGAAGCGTGAATATAT 874981 47 100.0 30 ............................................... TACTCCCGCGAAGTTGAAGCGTGAATATAT 874904 47 100.0 30 ............................................... GTTTCTTGCAGTACTTACTTTGAGGGTGAA 874827 47 100.0 30 ............................................... AAATAAGAAGAACCAATAGCAGAAGAAACG 874750 47 100.0 29 ............................................... GCGTCGTGTTCTTGGTGACGGTGAGAGTT 874674 47 100.0 29 ............................................... GTTAGTGGCAATGCCTTGCAAACTGTTCT 874598 47 100.0 30 ............................................... TCTACAGGCTCACCGTCTACCAGTTTGTTG 874521 47 100.0 30 ............................................... CTCCTGGGGGTCGCCTTTCGCCTCACGGAC 874444 47 100.0 30 ............................................... TATCCGTTAAGGGTATCGAGAAAGCCGTCG 874367 47 100.0 30 ............................................... ATGGTTGTTAATGGCAATATTAGTCAGTCG 874290 47 100.0 30 ............................................... GACGGCAAGCCTTACGAGATACCCGAAGCA 874213 47 100.0 30 ............................................... GTGTACAAGTGCTATCTCAACCGCCAAAGG 874136 47 100.0 30 ............................................... CATTATTGCAGACATTGAAACCGAGGTGTA 874059 47 100.0 30 ............................................... CGCCGTCGCCGGCCATAAGACCGTCGGGAC 873982 47 100.0 29 ............................................... TGACTTGTTCCTTCGCTTCTTGCAGTCTG 873906 47 100.0 31 ............................................... GAAATTTAATAATAAAAACCTGCCCTCTGCA 873828 47 100.0 30 ............................................... GAACAGTGCGGAGACGTGTGCGAACGTCTC 873751 47 100.0 29 ............................................... AGTGCTTTGTCGAGGTCAATCTGTGCGTA 873675 47 100.0 30 ............................................... GCCAACCAAGCAGACGGTTGTTCGCTTCGA 873598 47 100.0 30 ............................................... CTTCGATGAAGCCGTCGCCTAACTATGACA 873521 47 100.0 30 ............................................... CAATCTTCAGATTAATCGAGAGGCTAATCA 873444 47 100.0 30 ............................................... TACCGCTCTCGAAATCACCGAAGACCAAAT 873367 47 100.0 30 ............................................... CCGTACGAAGCAGCTGTGCTTCGTTCTCCT 873290 47 100.0 30 ............................................... TCCTTTGTCTCGTGTTAATCCTGCTGTTCT 873213 47 100.0 30 ............................................... CGTATCGACAATAAGACTAAAGCTCAGTTG 873136 47 100.0 30 ............................................... GTGCCTCTCAAGTCTGCTGATCTTGCTTTC 873059 47 100.0 30 ............................................... CATCCACAGAGCAGAGTAAGGAACAAAGAA 872982 47 100.0 29 ............................................... ACTGGGTGTCCGGTATTTCTACCGATATT 872906 47 100.0 30 ............................................... CCAGTGACCTGAATCGTAAATTACGCCCAG 872829 47 100.0 30 ............................................... TGAAAACACAAAAAAAAATCTTAATCAACT 872752 47 100.0 30 ............................................... GGCATCACACCATTACGAACTAACTGGCGA 872675 47 100.0 30 ............................................... GTGTACTCTGTGCCACTCTTTACATCCTCT 872598 47 100.0 30 ............................................... ACAAGTGCAATCTCAACCGCCAAAGGCTTT 872521 47 100.0 30 ............................................... GAGGACGGCACATACTTTCGAGACGAAGTA 872444 47 100.0 29 ............................................... TACAGCGCACAGTTATCCGCTATTAGTGA 872368 47 100.0 30 ............................................... TAAAACACAATAGTTATGAGCGTGTTAGTT 872291 47 100.0 29 ............................................... ATAACGAGCGTTTACTTGCCTTATCTTAT 872215 47 100.0 30 ............................................... ACTTTCTCAAGAGGAACACCAGATTTGACA 872138 47 100.0 30 ............................................... GATGAATTCAAATCCTGTTAGTGCCTTGCC 872061 47 100.0 30 ............................................... GAATAATCCAAAGAACCATAAGACGATTCA 871984 47 100.0 30 ............................................... TCGTGCGCTTGCCTATGCTTGATTTGCCTG 871907 47 100.0 30 ............................................... ACCCAAAGTCGGTCTTAACCTCTGTCTCAT 871830 47 100.0 30 ............................................... CGGCACGTTCCTCACCTCGGTAGACCCTTC 871753 47 100.0 30 ............................................... CCCTGTATCATACGCTTGTAAACGTTCTGC 871676 47 100.0 30 ............................................... GCTGGAGCAGGATCACCTGGAGCAGCTGGA 871599 47 100.0 30 ............................................... TCAAGCCAAACGTGTTCTTTTCCCACTGCA 871522 47 100.0 30 ............................................... GCCATAGACGGAATAGCTTCTATAGCGGCT 871445 47 100.0 30 ............................................... AGCCCAAGAGCGGCAACCACGGCGACGGAG 871368 47 97.9 29 ..........................T.................... CCAGCTCATCGAGGAGATAGCCAGTGTCT 871292 47 100.0 30 ............................................... TGGTGTAAATGCTGACGGTGAGATTGCTGA 871215 47 100.0 30 ............................................... AAGACAGGAAGCGACAACGATGGCAAGAAG 871138 47 100.0 29 ............................................... GTAAGCATTTTACACTTGATTATGAGGTT 871062 47 100.0 30 ............................................... TATCATAAATCCTTATACTCATGAGGTTAT 870985 47 100.0 30 ............................................... TCTTTTTGGTGGCGGAATGTCTTCTTCTGC 870908 47 100.0 30 ............................................... TTAAGCCTGATGAGCCTGCTGAGCCTGCTG 870831 47 100.0 30 ............................................... TTGCCCTAACTTACAGAAGTAAATAATCCT 870754 47 100.0 30 ............................................... CTCTTTTCGGTTGGTTTTTCCGGCGCTGTC 870677 47 100.0 30 ............................................... ACAATATTGAAAATTACCAGATGCTTTCTA 870600 47 100.0 30 ............................................... GCGTTGTGAACAGCATCGGGAAAAGTACAA 870523 47 100.0 30 ............................................... AAAGATCCGCATTCAATCAGACAGATATCT 870446 47 100.0 30 ............................................... CCATCAGAAGAATCATGCGACATACGATGA 870369 47 100.0 30 ............................................... AACCTGATGTTGAGTCTTTCAATGTTGATT 870292 47 100.0 30 ............................................... TGAATCCATCTGAGCGTTTTCGTTTTTCAG 870215 47 100.0 30 ............................................... TAGATGACCGCACTTATTACAGCCTCAGAA 870138 47 100.0 30 ............................................... TCATGAAGCGTACTGTAGATGGCTATAGTA 870061 47 100.0 30 ............................................... ATGTCTTCCTCCGCCCAAAAGCGTTCTAAT 869984 47 97.9 30 ....................................T.......... CTTTTGTAGCCTGCTTTAACTCTGCTATCT 869907 47 100.0 30 ............................................... GATGTTGTTTTTGGGCGTGCGCAGAGGTTA 869830 47 100.0 30 ............................................... AAAACGTGAAAGGGTTACTATTAGGCGAAG 869753 47 100.0 29 ............................................... GTAATAGAATACTTACAGATACACGGAAA 869677 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 77 47 99.9 30 ATTGTGCTTGCTACTGCAAAGATACACATTTTGAAGCAATTCACAAC # Left flank : CAAGTCTTGCGAAGTGCTATAATGGGGAAGCTCGTGAAATCTCTTATCCTTCTTTTCTTTGATGCAACGACTTAGCGAATATAGGGTTATGTGGGTGATGGTCTTTTTTGATCTTCCAACTAATACAAACAAGGAAAAGCGTGCTTATACTATTTTCCGGAAAGATTTGATGAAAGATGGATTTACTATGTTTCAATTATCAATCTATGTTCGTCATTGTGCAAGCAGAGAGAATGCGGATGTACATGTGAAGCGAGTAAAGTCTTTTATGCCTAATTCTGGCAATGTTTGCATTATGGTTATTACAGACAAACAGTTTGGTGAGATAGAGTTTTTTTGTGGGGCACAGGCACAAACACCCAACGCTCCTGGGCAGCAACTTGAATTATTCTAAAAGAAAAAGAGTCCTATCATTACCAATAGGACTCTTTTAGATTGCAGTTTTTATTTTGCACAAAAACAATGTTACTAACTGAGAATCAGAGCAATACTTATTTTCA # Right flank : CACCAAACGGACGACTTTGTAAGCTTAAACTCGTGTTTTGACTTTTGGTCGGTCTTGCCTGCTGCCTTACAGATTTATTCCTGGCTTTCAGTTGAATGGCGTAGTTGGCTTTCAGGAATGTGTAGTTGGCTGCTGCGTAGAGCGTATAGGCTTGCTGCGAAGGGATGACCGTTTGCCGAATCCATAAATCATCTCCGTTTCCTGCACTTATGTTTATTGGAGGCTGTCCGATAAAACTCAAACAGCATGATCCCCCTGTGCAATCTCTTTTGAACAGACCATTCCGCATTGTCTTCGGAAAAGTAATCCCCCTGATGAAATAAGTTCTGCCGGCACAGCTCTTCGCCAGCTGCAAGTTGGCTCCCCTCCCGGCAATATATGGCATGGTGCGGGCCATCAACACGCCCGGTGTCTGTCGGCAACTCCATAAGTGTCTGGCATCAGCACATCTGCAGGAAAGGCCGGTTTAATCCAGTCACTATCCTATACAGCAAGACACT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTGCTTGCTACTGCAAAGATACACATTTTGAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.70,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //