Array 1 142-709 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHJG010000045.1 Aeromonas veronii strain CN17A0103 Scaffold43_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 142 28 100.0 32 ............................ GCCAGGGTGCAGCTTGGTGAGGCTATTGAGCC 202 28 100.0 32 ............................ TGTCTGCACGGCAAAAAAGCCGGCTGGATGAC 262 28 100.0 32 ............................ GGTATCCGGCGGGCCAGGGTGAACACGTCATT 322 28 100.0 32 ............................ TTTGATGTCGCGCATCACGCCATCGAACGCCT 382 28 100.0 32 ............................ ACTGGTGCCAACCTGTCTCGCCTATCCAAGAA 442 28 100.0 32 ............................ ATGAACAACACTTTGAAATGGGGTGTGATTTC 502 28 100.0 32 ............................ AACGTCAGCCTCGGAGATCAGGTGCTGGCCAT 562 28 100.0 32 ............................ GCAGTCGTAATAGCCGAACTCTATGACGTTGC 622 28 100.0 32 ............................ TGGATAAACCACGCGATGGTCTGGTCGTTCAC 682 28 82.1 0 ..................TCA....TT. | ========== ====== ====== ====== ============================ ================================ ================== 10 28 98.2 32 CCTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : CGGAAAGTCCTCCCTGCGTCCGCTGATGGCCGGCAGCAGCCCGTCGTTGCCTGATGGATCCAACCCCTCCGCTGCTATAGTGCAGTCGGCTTCTGACGTTCAGTGCAGCCGTCTTCTGAAAACGACAGCGATGGTGGACATC # Right flank : ACTGGTTGCAGCTAAACCGGAAGGGCCGCTGACTGCAGGTTCATTCCACTCCAAGATCAGTGCAATGCTGGTTATTGAGCTACTGGGTCAACAGCTATTGGAAAATAGGCCAGAGCTGGCGGGAGCTATCTCGGATAGTGCCAAGGCTACGTTGCCTTGGTTGATACAATCGCTAGCGAGGGGAGCATCATCAATACTTGGACACCAGACTGGATCGATGTCCAATGTAATCCATCCGGGTAGTATGTCAGCCAACATCAAATGGCACACTGAGTGGCATACCACAAAAATATAAAAAATTAAAAACCCAACCTAATCAATAGGTTGGGTTTGGTATGTGGCGGAGAGACAGGGATTCGAACCCTGGGTGGCATTGCTGCCACAATTGATTTCGAGTCAATCCCGTTCGGCCACTCCGGCATCTCTCCGTGGGGAGAGATCTTTACCCAAGCAGGGCCGAGGATGCAACAAAAATTTCTTAGATATCAAATGGCTGAATC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCTCGCTGCCGCACAGGCAGCTCAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3839-151 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEHJG010000049.1 Aeromonas veronii strain CN17A0103 Scaffold47_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3838 28 100.0 32 ............................ GCCTGACCAAACCGTACAACCTACGTCCAGGG 3778 28 100.0 32 ............................ AACCCGCCCTCCGTCTCAACCTCAATAGCTAT 3718 28 100.0 32 ............................ TGCGGAAAAGCCCGCTGGCGTCTTCGGCCATC 3658 28 100.0 32 ............................ ATGGCCCAGCGCGGCGATGCCCTGGTGTTTGA 3598 28 100.0 32 ............................ AGATAAAGCCACGCCATTCGGTCAACAATGCG 3538 28 100.0 32 ............................ ATCCCGACGATGATAGCGAGCATCATGATGGG 3478 28 100.0 32 ............................ AGTACGTCGGCCCGGCTAAGTTGGTGGCGGCG 3418 28 100.0 32 ............................ CAGGAGGAATTCGACTACCTGATGGACCTTGA 3358 28 100.0 32 ............................ TCACCTACACCCCCAAGAAACGGTACGACCAC 3298 28 100.0 32 ............................ ACATATATCTCGGTTCGAGTAACGTTGCTGGA 3238 28 100.0 32 ............................ TGGCAGAGCGTGATCCCGAACATGATCCAGCT 3178 28 100.0 32 ............................ ACCGATGGGGCCACCGAACGACGCCAGGGCGT 3118 28 100.0 32 ............................ TCAGCGAACGTCGACCCGGACATCATCATCTC 3058 28 100.0 32 ............................ AGCTTGACCTCGGTGGGGCACTCGTCGAGAAG 2998 28 100.0 32 ............................ TGGGGTGGCTACCGCGACCACCGCGACCACCG 2938 28 100.0 32 ............................ GACAACCAAGACCGACCCTTTCGAAGGAAACA 2878 28 100.0 32 ............................ AGGATGACCCCATGGCCCAAGCCATGGTGGCG 2818 28 100.0 32 ............................ TGGGAAATCGAAGTGCGGGGCAACATCCAGGT 2758 28 100.0 32 ............................ GACCTGCGCTATGTCCTGCTGACCGATGACTC 2698 28 100.0 32 ............................ AAGAACTTCTTCGGCTTCGGCGATGACGAGCA 2638 28 100.0 32 ............................ ATCGGCAGCGTGAAGGACGCGCTGCAGGCGCT 2578 28 100.0 32 ............................ GTGAAGGTGACATAGGCCACCCCATCTTCTTC 2518 28 100.0 32 ............................ ACCGGTTAGAGGATGTGTGGGGCAGCGTGGAT 2458 28 100.0 32 ............................ CGTTCGGCCAGGGCCGCCCGGATGTCGGTTCG 2398 28 100.0 32 ............................ AGTTCAAGGAGCTGTTCGGTTATGGCTCTGAC 2338 28 100.0 32 ............................ CTGCCTGTTTGGCCAGTTGAATGAGCGGGCAT 2278 28 100.0 32 ............................ GTCGAGAGATAGATTAGGCGAAATCCGCCTAA 2218 28 100.0 32 ............................ TACAGGGCATTGGTGCCAATGTAAAACCGCTG 2158 28 100.0 32 ............................ GGTGGCCTGCCGAGCGGCATCCTCAGCGATGC 2098 28 100.0 32 ............................ TCGACGGGGCTTAGTGTGATCTGCCGGGATAT 2038 28 100.0 32 ............................ AGCACCCGAGTGGATGTGCTCGACGAGGTGAC 1978 28 100.0 32 ............................ ATGCTGACCCACATCATGGTCAAACTGAAAGA 1918 28 100.0 32 ............................ ATCATCGGATCCGGTTGCTGGGCCTGAGCCTG 1858 28 100.0 32 ............................ CAGCTCATGGATGGGCAGGTCGGGCGGACATC 1798 28 100.0 32 ............................ CCGACGAGCCCGAGCTGGTCGCCGCTGCGCAA 1738 28 100.0 32 ............................ AGATTGGCAAATCCGCATCATCACCACCATTC 1678 28 100.0 32 ............................ TACCTGAAATTCAGTGAGCCGGGTATGGGGTC 1618 28 100.0 32 ............................ AAGAAAAGCACCGACAGTACCGAAAGCACCTC 1558 28 100.0 32 ............................ AATAAAAGCAATCTGGAGCGCGACCTCGATAA 1498 28 100.0 32 ............................ GGTACCGTCGCGAAAGCGGCCACCCCGGTTGC 1438 28 100.0 32 ............................ ATCATCGGGTAGGGCTCGTCGTAGGCCGTCAC 1378 28 100.0 32 ............................ GGTAACAAGCAGGTTGCGGGGGAATACGCCAT 1318 28 100.0 32 ............................ GGCAGCACTCCGGTCACGCAGATCATTGTCCC 1258 28 100.0 32 ............................ TGTCGGGCATGACGTGGAACGGTAACCGCCTG 1198 28 100.0 32 ............................ AGGAAGAGCAGCAGGAAGAAGCCGCATCCGCA 1138 28 100.0 32 ............................ ATGACGGGCACCGTACCGGATTTCTTGCAGGA 1078 28 100.0 32 ............................ TGACCGCGCAGTACAGCGCCGCCCTGCTGGCC 1018 28 100.0 32 ............................ CAGAGCGCCAATGAGCGAGCTACCTGGGAGGC 958 28 100.0 32 ............................ AGTAAGATAGACGGTAGAGACAAAGGGGCTTC 898 28 100.0 32 ............................ GGCAGGATCGCCACGCCGTCGCGGAACTCCAC 838 28 100.0 32 ............................ TGCAGGACCGTGGCTACAGCGTCAAGTTGATG 778 28 100.0 32 ............................ GGGATCGACATCGAGCTTGGCAAGGCTGTGCT 718 28 100.0 32 ............................ CCGACGCGATCCCGCCTGTGGATCAAGCCTAT 658 28 100.0 32 ............................ AGCTGCGGGAACTGGGCCTTGATGTCGGCCAC 598 28 100.0 32 ............................ TGTCGGGCATGACGTGGAACGGTAACCGCCTG 538 28 100.0 32 ............................ TACTACGCCAAGGGCAACTTCACCTACAACCT 478 28 100.0 32 ............................ TCGAAAAAGAACTACTGTCCTGTTACCAACCA 418 28 100.0 32 ............................ AATGGAGAAAATCGTCATGGCACCAAGAAAAG 358 28 100.0 32 ............................ AGTGACTCCACGGCCTGTTTAATTGTGTTCAT 298 28 100.0 32 ............................ ACATTGGTGATGCCTGCCGCTGCGATCTTCCC 238 28 100.0 32 ............................ AGGAACGCATTACCTCCTGCGCCGATGTTGTG 178 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 62 28 100.0 32 CCTCGCTGCCGCACAGGCAGCTCAGAAA # Left flank : TGGCCGAACTGCTTAACCTTACCGAGGTGAACTGGTTGCAGGGGATGCGGGACTATATCCAGCTCGGCGAACCAGAACCCGTTCCTCAGGGAGCCAGCTTTCGTGTGGTAAGGCGGGTGCAGGCCAAGAGCGCTCACAACAAGCGTCGCCGCTCGGTGGCCAAAGGCTGGTTGAGCGAAGAGGAGGCGCAGGTTCGCATCCCCGATGCTCAGCAGAAGGCGATGTCTCTGCCTTATGCCGAAATGCACAGCCTCTCGACCCAAAGCCGGATGCGCCTCTATATCGAACACGGCCCTCTGCTCGATAAGCCTGTCGCCGGGATGTTTAACGCCTATGGGCTAAGCACCACAGCCACCATCCCCTGGTTCTGACCCTCTTTTTCAGGGCGTAGCTAACTCATTGATTTTTCAATGTCTGTTACGCCCTGATAAAAATAGGGTTCAGTGACGGATTTGGGGTAAGTTCTTTAACAATCAATTAGATAGCACTAATATGTAACA # Right flank : ATCTGGCTGGCCGCGCTCGGCGATTGTCATTTTCAGAAGACGACTGCACCAGTTGATTGGGCGTAATGGCTGTTGTGCAGCCAGCTCCTGACAGTTCAATATCAGAAGTGATCTGCACCAATCTCGACTATGCTCAATACTCGTGTGCACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTCGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCTCGCTGCCGCACAGGCAGCTCAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //