Array 1 401209-402588 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL397138.1 Corynebacterium accolens ATCC 49726 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 401209 36 100.0 28 .................................... GCGCGTACCTCGTGGGCGCCGGAGCAGG 401273 36 100.0 28 .................................... TGACCACAAGGTCAGCCTTTTCACGAGA 401337 36 100.0 28 .................................... GCCATCATCCTCATCAATGAGGCCGTAG 401401 36 100.0 28 .................................... CCACCATCGAACCTCACTGGGATAACTC 401465 36 100.0 28 .................................... TGCAGAGGTAGCAGCACTGAAGAATGTC 401529 36 100.0 28 .................................... ATAGCGCTGGAATCCCACAGAGTGTGAA 401593 36 100.0 28 .................................... AAGCAGTACGCGGGGAATGCTGAATCAT 401657 36 100.0 28 .................................... AGCGCCCGACATGAGCGTGAGCATTGCT 401721 36 100.0 28 .................................... GATCGCCTTGTGTACCGTCGGCACAGAT 401785 36 100.0 28 .................................... TCAACAGCACGAGGAGCAAGCCACTAAT 401849 36 100.0 28 .................................... CACCGTCATGATGGACATCATGAGTACC 401913 36 100.0 28 .................................... GCGCGGCTCCGCGTGCTTAACGAAGTGG 401977 36 100.0 28 .................................... TCCGCGCCATTGACCTCAACCGTGGCAA 402041 36 100.0 28 .................................... CTCGCAGAGCTCACTACTGCTGATGAAG 402105 36 100.0 28 .................................... TACCGCCGCGGTGGACGGTATTGCTGGC 402169 36 100.0 28 .................................... TGGATACCCGGCAAACGGGCAATTTTCA 402233 36 100.0 28 .................................... TGCGGGACTTAATCAGCATCGTCAACCG 402297 36 100.0 28 .................................... ATCGGCATTCTCGCAATAAACACCATCC 402361 36 100.0 28 .................................... CATTGCAGCCTGGGCAAGGTGGTCATGT 402425 36 100.0 28 .................................... AAACCCCACACGAGAAGAAATCCTTGAA 402489 36 100.0 28 .................................... ACCGAAACCGTGCAGGGCTCCACGATGA 402553 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 22 36 100.0 28 GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Left flank : AGAGGTCATCGACCCGCTTACGCAGCTCTGCTACCGGAAGCGTTGCCACGAACTTAATTTCCGCGCGGGAAGAGCGGTCTTGGCGCGCGCCCGCGGCTTGGGCGAGGTCGTGGTAGATGCGGCGGGTGCGCACGAGGCCATCGCGAAGCGCCAGCGCCTGCATCAAGTTTTTCTCGCCATCAAAATCGGTGGCCACGTTCGTGGCATTGATGGCCTGCACGAGCTTATCGATGCGCCCGGTAATGCCCTCCAACTCGCGCAAAAGCTCGGCCGGATCCTCGTCCGGGGTATCGCCCTCCTGCACGCGCACGACGGAGAGCAGGCGCTCGCGCAGCTCATTGAGCCGTTCCTGCGCCTGCGCGCGCTCTGCTAATGCCTCTGCCAGTAACATGGTTCCTCCTTCAGGGTAGGTAGGAACCAACGTAGTCTGGGTGGGGGCTGGGGTCAATGGTTTCTAAGGATGAAAGATGTTTTTATCCACTCCTTAATAGATTTCTTTG # Right flank : CAGTGCGGCCCAAAATGGGCCGTTTAACTGGGGTTTATTGGTGATCCTGTCTTAAAAAATTACCAGCTGAGATGGTTTATCTTCCACTTCAGCGGTCTCCGCCTTAGAAAACCTGATGGCTTTTGCCCACTGGTTATCAGTGATTGAAATGATCCTGATGTCACCACCTTCCGGGAGATGGGCTTTGATCTGTTTAACGGTAGAAGCGATTCGAGAAGATAAAGGGAAGTATTGGACGTAAACGCTCAATTGAGATCTGCAAAAACCGAGATCCAAGAGTTGATTTCGGAATTTGTTCGCCTCACTAGTCTGCTTCTTAGTTTTAACAGGTAGATCGAACATCACCACACACCACATTGGTTCGCTATCCTTCGCTGGCATCGAGGACCCCTTCCCATCGGGGCACACTTAAATCGCGAACGGCTCCCTCGACGTAGAGACCGTAGTGTTGGCCAAATTCATTAAAAACCGTGCTGAGGGATTTGCCACCAGCTTCAAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGGGGTTCAGTTCTCATTACCCCTGATAGACTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.20,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.74 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 1836575-1836301 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL397138.1 Corynebacterium accolens ATCC 49726 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1836574 29 100.0 32 ............................. TAGCCACGAGCAGCACCTGCCTTAGGGGTGGG 1836513 29 100.0 32 ............................. AAGGTCATCAACAACCCTATCGCCGGGTGCCA 1836452 29 96.6 32 ............................G CGGACGGATACACGGTGAAGGGGTCCGCAAGG 1836391 29 96.6 32 .......G..................... CATGCTGCTCGCAATCTTGCCCACTGACAGCA 1836330 29 79.3 0 ..A...T..C.T..........G.C.... | C [1836305] ========== ====== ====== ====== ============================= ================================ ================== 5 29 94.5 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : TGCATGATGGCTCGGGCAATTTTTCCACGTCGCATGTGCTCCCCGCGTGAGCGGGGATGAGCCGAATTCCGATACGCAGGCTATGTGCCACAACTCCTGCTCCCCGCGTGAGCGGGGATGAGCCGCGAGAAATACCTAAAAGGGCTGGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCCTGGCCCGCTTCCTCACGATTCAAATCAAACTG # Right flank : TCAAAGTACAGAAAGGAACCAAAAGATGACAATCGTCGTCGCGCTTATCAGCGCATCATTCATCATCACTAAAGCACCAGCATGGGCTACTACCACTGCGCTAGTAGCCATGATCGTTTGCTTAGCTCTGGACACACGCGAGCAATGGCTAGAAAGAAAAAATCATGCAGCTTAAAATCATTGGCGCAGGCACAGAGAAAGGTGCTCCTCGCATGAGCACGGATGAGCCTACCAACCCTCGAAAGGACTTATCATGGACATCATGTCTAAAATTTCAAGCGCACTAATAGTGATCGCCGTGCTTATCGCGCTTACTCTAGGGGATACCCCAATATTCTGGGTAGTCATGTCCCTCACTGCGGTTACGCTCACAGTTGAGACCGTCCAACTCGTGCAGAAGTGGCGGAAAAATGCAGCCTAAAATTGTTGGCCTAGATACTGGTGATGAATGTGTGTTCCCTGCGGGAGCGGGGATGAGCCCCCGGGTGCGACCACGACAT # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1837894-1836950 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL397138.1 Corynebacterium accolens ATCC 49726 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1837893 29 96.6 32 ............................G TAGCGCGTGTAGAGGAACTCACCCCAACAGGC 1837832 29 96.6 32 ............................G TGCTCATTGTCGTCCCACTTAATGTCGTTCAT 1837771 29 96.6 32 ............................G AGAGCAAGGGGCTGCAACCCCACACCGAAAGG 1837710 29 100.0 32 ............................. TCTACGGCAAGGTACGGGACAAGGTGGAAATG 1837649 29 100.0 32 ............................. TGGTTGGTAGGCATCCCGACCTCATCTACCTC 1837588 29 96.6 32 ............................G ACAGCACTCCCCAAACCGAAGAGGAAGCACAC 1837527 29 100.0 32 ............................. CCTACGTGACGCTATCGCCGCCGGATACCATC 1837466 29 100.0 32 ............................. ACCAAGCAGGCCACGAAATAGAACACGCACAG 1837405 29 100.0 32 ............................. TCTTCGGAAGTCATGCCAGTCCTGTTTTGGAT 1837344 29 96.6 32 ............................G TATTCTCCATTGCGGTCGCGCTGGCGCTCGCT 1837283 29 100.0 32 ............................. TCACAAGCACAGTTACGGGAGGACTCATCACA 1837222 29 100.0 32 ............................. TCGGCCATTAGGTCTAGATACCTCCCTTGATG 1837161 29 96.6 32 ............................G TGGGGCCCTAAGCCCCTGTGACCTAGTAGCTA 1837100 29 93.1 32 ..........................TG. ATGATGGCTCGGGCAATTTTTCCACGTCGCAT 1837039 29 96.6 32 ............................G AATTCCGATACGCAGGCTATGTGCCACAACTC 1836978 29 93.1 0 C...........................G | ========== ====== ====== ====== ============================= ================================ ================== 16 29 97.6 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : TGAACTTGAAGTCATCGCTTCTGGTCTTAACTGGGCAGAAGAGGAAACGTTGTCATGATGGTGCTGGTTATTACTGCTTGTCCCGCTGGACTACGCGGCGATCTGTCCAAGTGGCTCATTGAACTGACTCCCGGTGTATTCGTGGGACGTCCCTCTGCTTGTATACGAGATTTGCTCTGGGATCGCACAACCGAGCTTTGTAAAGATGGCCGCGCACTTTTGGTGTATTCAGCCGCGAATGAGCAGGGAATGGAGTTCAAGACTCACAGACATCATTGGGAACCTACGGATTTTGACGGGATTACCTTGATGACGCGACCGGCTGAGTCTAAGCAACCACAGCGAAGGACTGGATGGTCTCAAGCCCGACGTAACCGTATTTCTTATAAGAAACAGAAGGGAGGATATTAGACCGCGTGGAGCTTCGAGGGTAGCTTTCCCCAAAATACAAGTCGTATGTAAAATACGTTTAAGGCTCGAATTTCTGCTGTTCAGCAAGT # Right flank : CGAGAAATACCTAAAAGGGCTGGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCCTGGCCCGCTTCCTCACGATTCAAATCAAACTGGTGCTCCCCGCGTGAGCGGGGATGAGCCCTAGCCACGAGCAGCACCTGCCTTAGGGGTGGGGTGCTCCCCGCGTGAGCGGGGATGAGCCCAAGGTCATCAACAACCCTATCGCCGGGTGCCAGTG # Questionable array : NO Score: 5.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //