Array 1 883287-888536 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGLF01000001.1 Zavarzinia compransoris strain DSM 1231 DSM1231_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 883287 36 100.0 30 .................................... CCATGGGTGGATTACTTGCCCTTCTGACCG 883353 36 100.0 30 .................................... CAGCAGCGGCAACGGCGCCCAGATCGGCAG 883419 36 100.0 30 .................................... CCGAAGCCGCCCGGGCCTCTGCGCTGGCGC 883485 36 100.0 30 .................................... CTAGACCGGCGCTTCACGCGCCAGGCCGGG 883551 36 100.0 30 .................................... ATAAACCGACCCCTCGTCACCGACCAGATC 883617 36 100.0 30 .................................... GAAATAGATGTCGGAGGCATTGGCGAGCAC 883683 36 100.0 30 .................................... AGGCCGCGCAGATCGCCGCGCGTGGCTTCA 883749 36 100.0 30 .................................... CAACCTGGGGGACGATGGATTGGTGGTAGC 883815 36 100.0 30 .................................... ACGCAAGGCCGACAAGCTGTCCGAGCTGAA 883881 36 100.0 30 .................................... CGTTACGTAACTCGAAGTACGCTAGCGGGA 883947 36 100.0 30 .................................... GGATACGGAAGCCCTCGGCGGCGGCGAAAT 884013 36 100.0 30 .................................... AACGCTCTCGAACTGTTCATTTGCCATGTT 884079 36 100.0 30 .................................... CAGCCGCCCCTTTTCGTCGAGCCCCGGTTG 884145 36 100.0 30 .................................... AAACCCCAATAGGAGTCGTTGCCGTCGACG 884211 36 100.0 30 .................................... CGCCGTAATCGCCGAAGCGGATCACGCTGC 884277 36 100.0 30 .................................... AAGCCGCGCGATCGAGAAAGCCAAGCGCGA 884343 36 100.0 30 .................................... CAGCCGATGGTTTCGTAGCTGGCAATCAAT 884409 36 100.0 30 .................................... ACCGCCGCCGGCGAAACGGTGGGGGGGAAG 884475 36 100.0 30 .................................... TAGAACTATCAACAATAGTATTTCCACTAA 884541 36 100.0 30 .................................... ACCTCGGGCGCCATGACCCTCGCCGCCGGT 884607 36 100.0 30 .................................... TACCTCGAGCGGCAGGGCCTGATCAGCGTG 884673 36 100.0 30 .................................... CAGCGCTGCGGCTTGGTCCTGTATCAGCTT 884739 36 100.0 30 .................................... TCGGCCCAGCAGGTGCTGAGCGACCTGCGC 884805 36 100.0 30 .................................... CTACGATAATCGGCCAGCAGCGCGCGGTGG 884871 36 100.0 30 .................................... GATGCACACCCAGGACTGCCCGGTGCCGCA 884937 36 100.0 30 .................................... GTCGATGGCGACCAGGTCGCTCCTGGACGC 885003 36 100.0 30 .................................... GGCGGATCGCGCGATCGCAAAGCGTGCGGA 885069 36 100.0 30 .................................... CGGCAGCGGGAGCGGATCGCCAATGGCGAC 885135 36 100.0 30 .................................... CATGGTCGCGATGTCCTTGCCCGCCAGCAG 885201 36 100.0 30 .................................... TGCCGTTCGTGTCGCCAGAAAACGATCAGA 885267 36 100.0 30 .................................... CTTGCCGGTCAGGGCAAGATCGGCTTCCAT 885333 36 100.0 30 .................................... CGCCCGCTCCAGCGGGTGCATCCGGGCCCC 885399 36 100.0 30 .................................... CAACAGGCGCCGCGTTCTACGGCTCCGGCG 885465 36 100.0 30 .................................... CGTAACGATCGCGGGTTCCAGTGCGGGGAT 885531 36 100.0 30 .................................... GAGGGTTACACTCATGTATTTTTTCACGCC 885597 36 100.0 30 .................................... GAAGCAAGATCGCACATCGGCTCGCCAGAG 885663 36 100.0 31 .................................... CGAGCCAACCTACGCCGACCTTGACGGAATC 885730 36 100.0 30 .................................... GAGGCCGTCGAGCCATTCAGAAAACGCGGA 885796 36 100.0 30 .................................... GCCGAGACCTTCGCATCGGTGAAGGCCTAT 885862 36 100.0 30 .................................... GGCATCATGCAGCGCGGCGCCCTGAAGGCG 885928 36 100.0 30 .................................... CAGGGAAGCCGTCGTCGACCTAGCGCAGGA 885994 36 100.0 30 .................................... TTCTTTTAAGTTACGTCCTTTAGACTTGAA 886060 36 100.0 30 .................................... CGTACTAGCCGCCGAAACGGCAATCGGGCT 886126 36 100.0 30 .................................... GGACTTCTGGCGCGCCAAGCCCGGCAAGGA 886192 36 100.0 30 .................................... GCTATGGCGCCTTCGGGCGCCAGGTCAAGG 886258 36 100.0 30 .................................... CGCGGGGCCGATACCATCGACGAAGCGCCG 886324 36 100.0 30 .................................... GAAGAAGGCCGAGGCGCGGCGCGACGGGCG 886390 36 100.0 30 .................................... AATCAGTCGGTCGCATCGTCGAAGCCCTTG 886456 36 100.0 30 .................................... GGCGGCCTGATCGTGGCCCGATGGTTCGGG 886522 36 100.0 30 .................................... AAGACGATCACCACGGGCGTGAAGGCAGCG 886588 36 100.0 30 .................................... GCGCCGCTTCATCGAAAACGAATTCGGCTA 886654 36 100.0 30 .................................... TGAACGCTTGCCCACATTGCCTTTCGTGTC 886720 36 100.0 30 .................................... TGGCGCGGATTCTGGTCGCAAGGCGACGGC 886786 36 100.0 30 .................................... ACCGCGGTCGGCATCGATATCGATCCGACC 886852 36 97.2 30 ...................................T GGACGAGCGCGTACTGCGCACCTTTTGCGG 886918 36 100.0 30 .................................... GCCTGCGCCTCTCTTGTTCAATCTCGTCTT 886984 36 100.0 30 .................................... GCTGGAGAGCTTCAAACGCTACAACCTGCG 887050 36 100.0 30 .................................... GTGCGGTAGACCATACCTATTTCCCAGCCG 887116 36 100.0 30 .................................... AAAAGCGCGCAAGTATTTGCTTGATCATAT 887182 36 100.0 30 .................................... TCGAAGCCCTGCGTGAACGGTTGCGCGACG 887248 36 100.0 30 .................................... GACAGGGCTCGCGGCGAGACCGTGGCCATC 887314 36 100.0 30 .................................... CTGGGCTGCGGCAAGACGCCGACCGCCTGT 887380 36 100.0 30 .................................... TACGTTGAAGAACGCGAGAAACCCGCCCTC 887446 36 100.0 30 .................................... ATGTTAATATGTTAGTTGACGCTCTCCCCC 887512 36 100.0 30 .................................... TCCTTCCACTCGCCGCTGGCCTTGTCCTTC 887578 36 100.0 30 .................................... CGAGGTTGCCGATGGCGCGACCTGGAAATG 887644 36 100.0 30 .................................... GCGTCTGCAACGCCGCCAGTGCCGGTCTCG 887710 36 100.0 30 .................................... CCAGCAGCGACTGAGCGTGGCGCATCGCTT 887776 36 100.0 30 .................................... GCCACCCGGAACCGGGCGGCACTGGCGATG 887842 36 100.0 30 .................................... GCCAAGGTCCAGTGCTGCGCGAAAATCGGC 887908 36 100.0 30 .................................... GGTCAGGCAACCCCGGTCGTCGCGGCCGCA 887974 36 100.0 30 .................................... CGCCATGCCCTTCGCCCGTCCACGCGCGAT 888040 36 100.0 30 .................................... TATTCATTGCACATGCCTGCACGATAGCCG 888106 36 97.2 30 ........................C........... TGCGCCTTCGACATGGCCTCGGCGGTTGCC 888172 36 100.0 30 .................................... CAAGTCCGGCGCTTTGCCGAAAAGCTCGAG 888238 36 100.0 30 .................................... CCCATCTGCGAGCCCATCACGACCACGACC 888304 36 100.0 30 .................................... TTGCCCCACTTTCAGCCGTCATGCGCTTTG 888370 35 97.2 30 .......................-............ GCCCCAGGGGAGCGGCGGCGTTATAGTCGC 888435 36 94.4 30 ...................C...............T GCGAGCCGGGACGAGGTGCATCGCGAGTGC 888501 36 75.0 0 ..........C.CA.CAG...AC...........G. | ========== ====== ====== ====== ==================================== =============================== ================== 80 36 99.5 30 AGTTTAGCGGTCTGGTGACTGGGGTCCAACCGCAAC # Left flank : CGTCGCCTCGCTGGCCCGGGCGCATGCCGGCGAGGGCGAGGATCTCGCCCTGCCCCTGCCCCGCTTGCCGCTGGAGGGCTGATGTGGACCAAAGCCCGGCCCTCAGCGCCTATCGCATCATGTGGCTGATCGTCCTCTTCGACCTGCCCGTGGGCACGAAAGCCGAACGCCGGGCCGCCACCCGGTTCCGCCTGGGCCTCCAGGACCTCGGCTTCGAAATGTCGCAATTCTCGGTCTATCTTCGCTTTGCCGCCGGCAAGGAAAAGGCCGAAGCCCTGTGCCGCCAGATCGAAGCCCTGATGCCGAAGAGCGGCAAGGTCCACGTCGTCCAGATCACCGACAAACAATATGAGATGATCCGCACCTACCGGGGAAGAAAACGTGAACCAGGCCCGAAAAACCCGAATCAACTTGTCCTGTTCTAGCCCCGCCACGGCCCGGCCCCCGCCTCCCTCCAGAAAGAAAAAAGGCCCTGAAATCAGGGCCTTAGTTCATATCGC # Right flank : CGCGCCGTTGTGGCTTTCCGAGGTCCCGGCGGCGGGGGGCCGCCGGGGTCGGTTGGTTCATGCGGCGGGGGCGAGGCCGGCGGTGGGCAGGAAGTGGGGCAGTTGGGCGATGCGGGCGATCCAGGCGCGGATGAAGGGATAGGGGGCGAGGTCGATGCCGCCCTCGCCTGCCAGGGCGACATAGGGGAAGACGGCGCAGTCGGCGATGGTCGGGCGGTTGGCGGCCAGCCAGTCGCTGCGGACCAGATGGGCTTCGAGCAGGCCCAGAATGCGGTCGCCGGTGCGGCGGGCGGCGGCCTCGTCCAGGGCCATGCCGAATTTGCGGATCAGGCGGGCCGTGCAGGGGCCGTGCTGGATTTCATTGGCCGCGGTCGACAGCCATTGGACGACCTCGCCCTGGCGGCAGGCATCGCCCGGCCACCAGGCTTCGCCGCCATAGCGCCGGGCGAGATAGACGAGGATGGCCTGGCTGTCGCGCAGCACCACGTCGCCGTCGACCA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTAGCGGTCTGGTGACTGGGGTCCAACCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.40,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 106948-109625 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGLF01000006.1 Zavarzinia compransoris strain DSM 1231 DSM1231_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 106948 32 100.0 33 ................................ GCCAAAGTGCCGCGGAACAGGATTTTCGCCGCG 107013 32 100.0 35 ................................ CGGATTGATTGGGCACGAACAACTCCGGCTGCCGC 107080 32 100.0 34 ................................ AGGTCAGCCAGTGGATCGACGACATCCGCAGCAA 107146 32 100.0 34 ................................ CGCCTGGGGCTGGAGCACCTGCGTGCCCTTGAAC 107212 32 100.0 34 ................................ GCCTCGACCTCATCGGCCCACGCGCGGGCGGCGG 107278 32 100.0 33 ................................ GATCAGGTAAAGGCCGTCGCCGTCGAACCTGTC 107343 32 100.0 35 ................................ CGCCCGGGCTGGCGGCCATTTGAGCCGGCGGGTGA 107410 32 100.0 34 ................................ GCCGCGCTTGCCGCTGCTGCCCAGCCCGGCACAG 107476 32 100.0 35 ................................ TGCGGGCCGCCGCTCGTCCAGGATCGGACGCAGAG 107543 32 100.0 35 ................................ GTCGAGGGTACCGCCGAAGAGACCTTCGTTGCCAA 107610 32 100.0 35 ................................ CAGCGCACGACTTCCCCCCAGCCACTGCTCGCCAT 107677 32 100.0 35 ................................ TGTAAAGATCGGCGCGCCGCCCCTCCCCTCCACAG 107744 32 100.0 34 ................................ CATTTGAGGTATTCGGCAACCGCCTCGATCGCGG 107810 32 100.0 34 ................................ TCCCCGGAACGCTACATCCAGGCGATCGGCGAAA 107876 32 100.0 35 ................................ TTTCATGCCTTCTTGCTCTTCAAACCTAGAGCATA 107943 32 100.0 33 ................................ CCCGAAGTCACCCCGGAGCCGGCCCGATGAGCG 108008 32 100.0 35 ................................ CCGCCGGTCAATCGATGACCAGGCATGCACGAGGG 108075 32 100.0 34 ................................ GTAAAACCGCTACGATGGCGGATCAGATCCACAG 108141 32 100.0 34 ................................ TCAAAGCGCTTGCGCGGCCGGCGGCCGCCGTACT 108207 32 100.0 33 ................................ AACCAGCTTTTCGGCCGTGATCTGGATGGCCGC 108272 32 100.0 34 ................................ TCGGAGGCGAGCATTGCGCCTCACTTTGATGATG 108338 32 100.0 34 ................................ CCGAGGCGCTGGCCTGGACGGCCGACCTCACCAG 108404 32 100.0 34 ................................ CCGAAACCACCCGGGTTGCTTGTCGGGTGATAGT 108470 32 100.0 33 ................................ TTCCGTCGCCCCTTTCGTCCTGATCGAGGGTCG 108535 32 96.9 33 .......................A........ GGATAGAGCAGCGAGGTGGCGTGATCGCCCCAG 108600 32 100.0 34 ................................ TTTGTGGTGCGACCCGACGCCTTGATGCCGTAAC 108666 32 100.0 35 ................................ GTGGATCGAGAAGAAAGAAAGCGCGTAGCTGGGTG 108733 32 100.0 34 ................................ GCCGCCGAACTGGTGGATGGCGGCATAGGCCGCA 108799 32 100.0 35 ................................ GCGCAGGAGCAATCCGGCGCGTCCGGCCGGTGGAA 108866 32 100.0 34 ................................ CAGGAAAACGTGAAGGTCTCGGGGCTGGACGCCC 108932 32 100.0 34 ................................ CACTTGGTCGTCGGCGATCGAGCACTGCGCCCGC 108998 32 100.0 35 ................................ TTCCCCGGAGATAAAGCTAAAGCTGCCGGCGAAAA 109065 32 100.0 34 ................................ CTCGAACACGACGTGTGACACTCCATATTGCAAG 109131 32 100.0 34 ................................ GCCGAAGGATCGTGGGCGGCAATTCATGGTGACG 109197 32 96.9 33 .....................C.......... GCGCTGCCTGCCGGTCCTCAGCCGGCGTCGGGC 109262 32 100.0 33 ................................ CGCGCGCCGGCACCAGGTTAGTTAGGAATTTTC 109327 32 100.0 35 ................................ CCCGAATTCCGCGAGGCCGCGCGCCGGCGCCAACG 109394 32 100.0 35 ................................ TACCACGGCCGGGAGCAGCGGGACGTGGAGACCAA 109461 32 100.0 35 ................................ CCTTGGGATGATGCCTATGGCGACCCCCGCCCCTT 109528 32 100.0 34 ................................ AATCAATCGCCTTGGCAGCACTGCCATGCCCAGC 109594 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 41 32 99.8 34 GTCGCCTCCCGCACGGAGGCGTGGATCGAAAC # Left flank : CCCTCCCTTCATCTGGAAATGACCGATGCTGATGCTCGTTGCCTACGACGTGAATACCGGGGACTCAACGGGATCCAAACGATTACGCCGCGTGGCGAAAGCCTGTCTGGACTTTGGGCAACGTGTCCAGAACTCGGTCTTCGAATGCGAAGTGAGCCCCGCTCAATGGGCCATGTTGCGTGCCCGACTAATCGCCGAAATCGATATCGACAAGGACAGCCTGCGTTTTTACCGCTTGGGCGCAGACGGGAAACGCAGAGTTGAGCACGTCGGCGCAAAGCCCGTCCTGGACCTGGACGGCCCCTTGCTGTTCTGACCACATGCGAACCCGAATCTATCGGCCCTTCGACGCAGGGTTCGCGCACGACTTTTTCTTTTTTTGTTTCAAGTCGTTGGCAATGGACCACCTCGCGCCGACTACCGCTACGACAAACCACCGCGCACCGGTTCGCGCGAAAGCGCCCATTAGCGTTTGTTTCTCATAGTGCTATGGGTATGCG # Right flank : CCTTTCAGCAGGCGATTGAGTGCGCCGCAGGAAGGTCGCCTCAGCGATACCGTGATCGAACCCGAGATTTCCTCGTTCACATCGAAATCATAGGCATAGGCCGTCGCCCCCGCGCCGAGCGCACAGACCGCCGTGGTCGCCAGCAGGCGCCGCCAAGCGCGACCGGAACCGCCGCGAGCCCCGTGCTCCCCTTCATCACGTTCATGCCTCCTCCCCCGCCCCGCCCCGCCGCGCCGTCTGTCCATGCAGACGGTTCGCGGCTTTGCTGTCTTTATCGGACTTCTCGACAGGTAATCAGTTCGTTCCCATGCGCCGGATGGCATCGGGCGTGAACTTCGAGGGATCGACGTCCTGAACATTCCAGTTCAGCATCTTTTCCTCGTTCTTCAGGCCGAAGACGACATAGCGGCCGGACTGCAGGTCGTAGGTCGCCTCCAGCGCGGACAAGCAGAGGGGAATGTCGTAATAATTGACGATCGGCGCATCCTGGATCCGCCACA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCTCCCGCACGGAGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCTCCCGCGCGGAGGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.30,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 159350-160415 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGLF01000005.1 Zavarzinia compransoris strain DSM 1231 DSM1231_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 159350 28 100.0 33 ............................ CTGTTCGTGCCCGGCCGGTCCGGCACGATCGTT 159411 28 100.0 33 ............................ CCCCCCGTCGCGGGGGAAGCCGCACGGCATCCT 159472 28 100.0 33 ............................ CGGCGAGGAGACAATCGCCAGGATCGCCCGAGA 159533 28 100.0 33 ............................ CGAGATGGCGCAGGCTGTGGCTGCGGCGATCGT 159594 28 100.0 33 ............................ CCCCGCGCATGACCGCGACCGAGGCCCTGATCC 159655 28 100.0 33 ............................ CTACGGCGGGGTGGACGACATGGGCCGCCCGCT 159716 28 100.0 33 ............................ CCGCTGGGTCTATCCCAACACCTTCGACTGGGC 159777 28 100.0 33 ............................ TTCTCCCACCCCATGGACGGGCTGCAATACGCC 159838 28 100.0 34 ............................ CGGCGTCCGGGTGTCCTTCCCCTACCTTTCAGGG 159900 28 100.0 33 ............................ CCCCAGGCGGGCAGCGCTGACGCAGGGGCGACA 159961 28 100.0 33 ............................ GCTACCCCGGCGGCGTCCGGCGGCTGACCCCGC 160022 28 100.0 33 ............................ CTGCGCTGACTATGGGGACGCGACCACCCGGAA 160083 28 100.0 33 ............................ TGTCAAGGCGGTGCCGCAGACGGCCTTTGGCAT 160144 28 100.0 33 ............................ CCGGCGGGTGGAATACCGAGGTTAAGGCGGCCG 160205 28 100.0 33 ............................ GTTGTAGCCGGCGTTTCGGGCATCCGCGTCGGG 160266 28 96.4 33 ................T........... CATGGCGCGCATCGGAAAACGCCTACCCCGCGA 160327 28 96.4 33 ..................T......... CTGATTGCCCCCGACATGCAGGCGCAGCAGCGG 160388 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 18 28 99.6 33 GGCTCCCCCGCATACGCGGGGATGGACC # Left flank : GGAACGCCACGTCCGCCGCCAGATCACCCGCCGCCTCCAGGCCGACAAGGTCATTCCCGGCATGATCGACCGCATCAAAGCCCTGTTCGACCCCGCCGCAGGCCGACCGCCGGCGCCACTCCCGGCAGCGGACCGCGGTTCGGAAGAGGATGGGGCGCCATGGTGATCGTCGTCACCCGCGACGTCGCGGACCGCTTCAGGGGTTTCCTCGCCTCGGTGATGATCGAGGTCAGCCCGGGCACCTATGTCTCGCCCTCGATGACCAAGGGCGTGCGCGAGCGGGTCTGGGCCGTGCTCGACGGCTGGTTCCGGGAAATCGGTGGCGGCGCCATCACCATGTGCTGGCGCGACCGCACCCAGCCCGGCCATCTCGGCCTCTCGATCCTCGGCGCCCCGCCTTGCACCCTTCTGGACGCCGACGGTGTCTACCTCGGCTTTCGCCCCCCGGCATCAACTGCTCTTTGACATTGTCAAACGAATTCAGTCTCTTAAATGCAAGA # Right flank : CCGAGGCGAACGACAAGTCCTTGCGCGGGGCGAGGTCACCCAGCCGGTCGGTCAGCACCGGGATGTCGTCGTCGAAGTTGACACCGGCCAGGAGCTTCCCCACATTGACGGTGGAGGCCGGTGCCGGGCCGGGATGTTCCACTGCGGCGCCCGCGGCGTCGGATGTCACCCCATTAGTGGCGGCGCCGGCCTCTTCCACTTCCGTCAGTCGATGATCATAGATGCGCCGCCCGGTCCGGGCCTCCTTGACCGTGAGCTTGACCCGCCACAGCCGGCCGTCGAAATGCAGCGGGGCATAGAGACGGTGCATGGCCAGGGGCTCCCCCGCATACGCGGGGATGGACCCCTGCCCCGGGCGAAAGCGCTGGCCGAAATGTGGCTCCCCCGCATACGCGGGGATGGACCCCGGGCCGCACTGGGGATGTCACCCCTGGCCGCGGCTCCCCCGCATACGCGGGGATGGACCCACGCGGGATGTGACGATCTTGGCCTCGGGGCGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCATACGCGGGGATGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 2 160732-161333 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGLF01000005.1 Zavarzinia compransoris strain DSM 1231 DSM1231_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================================================================================================================================================================== ================== 160732 28 100.0 32 ............................ CCTGCCCCGGGCGAAAGCGCTGGCCGAAATGT 160792 28 100.0 33 ............................ CCGGGCCGCACTGGGGATGTCACCCCTGGCCGC 160853 28 100.0 33 ............................ CACGCGGGATGTGACGATCTTGGCCTCGGGGCG 160914 28 100.0 33 ............................ TCGATCAAGCTGACCATCCGCCCCAGTGTTGGG 160975 28 100.0 33 ............................ CACGTCGGCACCGCGCCCCTTGTGGCCCCTCGC 161036 28 100.0 181 ............................ CTGACGGTCAAGGAAACCGTGGCCGGCCGCCGGCTGTGCGATCATCGTTTGACGGAAATGGAAGAGGCCGGCGCAGTCACTAAAGAGGGGGTTGCGACCACCGCGGATGGCGCCGCCCGTCTCGGCCCGGCACCGGCCTCCACCGTCAATGTGGGGAAGCTCCTGGCCGGTGTCAACTTCG 161245 28 96.4 33 .........................T.. TCTTGAACATCAGCATAAGCAACACGACACGTT 161306 28 82.1 0 .............C.........TCG.T | ========== ====== ====== ====== ============================ ===================================================================================================================================================================================== ================== 8 28 97.3 54 GGCTCCCCCGCATACGCGGGGATGGACC # Left flank : CGTTGTAGCCGGCGTTTCGGGCATCCGCGTCGGGGGCTCCCCCGCATACGTGGGGATGGACCCATGGCGCGCATCGGAAAACGCCTACCCCGCGAGGCTCCCCCGCATACGCGTGGATGGACCCTGATTGCCCCCGACATGCAGGCGCAGCAGCGGGGCTCCCCCGCATACGCGGGGATGGACCCGAGGCGAACGACAAGTCCTTGCGCGGGGCGAGGTCACCCAGCCGGTCGGTCAGCACCGGGATGTCGTCGTCGAAGTTGACACCGGCCAGGAGCTTCCCCACATTGACGGTGGAGGCCGGTGCCGGGCCGGGATGTTCCACTGCGGCGCCCGCGGCGTCGGATGTCACCCCATTAGTGGCGGCGCCGGCCTCTTCCACTTCCGTCAGTCGATGATCATAGATGCGCCGCCCGGTCCGGGCCTCCTTGACCGTGAGCTTGACCCGCCACAGCCGGCCGTCGAAATGCAGCGGGGCATAGAGACGGTGCATGGCCAGG # Right flank : TCTTTGCCTCTGCCGGCATTTGCCGCGCAGCCGATGAGGTTTTCTCGCGGCGGGCATATTTTGCTGCTTTGCTGCCGGGAGAGGGGCTCTGATCCGGGGGCCGCGCGGGACTCCTTGGTCAGGCCGGCTCTTCGGGGAAGCGGTATCAGTCGCCGCCGGCCGCCGCCAGTTGCCGGAGGTGGTGCCAGATGTCGTCGAAGACGCGGTCGGTGTAGTGGTCGGGCGGGGGCGGTTCGGCGGCCGATGTGCGCCAGGCTTCGGAGCCGAGCCGCAGGGCGCCCACCGCGATCATGGCGAGCAGGGCCGGTTCGCCGACGAGGGCGGCCCCGCCGTCGGGCGGGGGCGCGGTCCGGGCCGCCAGGGCTTCGGCCAGCCTCGCCTCGAGCCGGGCGTATTTGAGATGCATCCGGGCCCGGAGGGAGGGCGTGTCGCGCACCAGCGCGTCCAGGTCGATTCCTTCGGGGCTGGCCGAGTCCCGGATCGCTGCCGACATCGCCGCA # Questionable array : NO Score: 3.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-2.21, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCATACGCGGGGATGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //