Array 1 87254-93582 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTXN01000013.1 Marinomonas sp. UCMA 3892 strain UCMA3892 Contig_48, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 87254 28 100.0 32 ............................ TTCAAAGGAGATAGAAGAGGCGGTATGAACGC 87314 28 100.0 32 ............................ TATCTATGGTAATGACCTCTCTACTAACATTC 87374 28 100.0 32 ............................ TTACTGGTTTCTCTCGTATGGCTACGCCTATC 87434 28 100.0 32 ............................ GCTACTGCTATGCAACTTAAAAATCTCGAAGC 87494 28 100.0 32 ............................ TATTATGGACAATCTCCGTATGGAAACTTTCT 87554 28 100.0 32 ............................ TCATGAAAAAGCCTTAAATCATGGTAATGCGC 87614 28 100.0 32 ............................ GTAAGGGCGCAAGTCGCACTCATAAAAAAAAT 87674 28 100.0 32 ............................ TATGACTTTAAAACTTGACGGCAACGGCCTAC 87734 28 100.0 32 ............................ ATAAAGTGCCTCGTAATTAACAAGCAGCTTTG 87794 28 100.0 33 ............................ CTCCTGCGGTAATTCCAAAATCTGAGGCGTCCG 87855 28 100.0 32 ............................ TTGAAGATCATCATCCAGATGTTGTGTTTATA 87915 28 100.0 32 ............................ GAGACCGATAACATTTAATTACCGATTTATTA 87975 28 100.0 32 ............................ TTCTGCTCTTCGTAAACGCTTTGGTAATGATC 88035 28 100.0 32 ............................ CTACGGAAAAAATAAAAAGAACAGCTCAAGAA 88095 28 100.0 32 ............................ CACAACACGCCCACAACACGCCCACAGTATCT 88155 28 100.0 32 ............................ GACGCCAGCACTTTAGAGTATCTTGGAGAGGT 88215 28 100.0 32 ............................ TCCCAAAATGCGGGTAATATATATCTTGTGGT 88275 28 100.0 32 ............................ TACTCCACTACAAAGAAAGCCGCCGCAATGAT 88335 28 100.0 32 ............................ ATAGAAAGCACCTCCTCGGCAACGGTTCCAAC 88395 28 100.0 32 ............................ ATATAACACCAAAAGAAATTGTAGAAGAAAAA 88455 28 100.0 32 ............................ GTTAAGTACCCACACAGCACCAGCTAAGCCAA 88515 28 100.0 32 ............................ TATCACGATTACGATAGATGGTAATGTTGGCG 88575 28 100.0 32 ............................ TGACGCGTCTAGCGCTCTAACTCGTGCCATTA 88635 28 100.0 32 ............................ AAGGCTTAGCACGTAAGCGCCAAACTCTTTAA 88695 28 100.0 32 ............................ AAGCAGCCCAATCCAGTCTATGTTTGACTCTG 88755 28 100.0 32 ............................ TACCGCCCCAGTAGCTGACAAGCTTGATCCAA 88815 28 100.0 32 ............................ GAGCGTGTGCAGTCTATCGCAGTGAGTTATGA 88875 28 100.0 32 ............................ TCAAAGCCCGACAAAGAAATTGAACAAATCAA 88935 28 100.0 32 ............................ GCCCAACACCATAAAGTTTTAGTTCTTCACTC 88995 28 100.0 32 ............................ TCTTTGTATCCGTCGACCAAGTCGCCAGTAAC 89055 28 100.0 33 ............................ CAGCAAACTAAAAACGGCGGTTGAATGGGCCCG 89116 28 100.0 32 ............................ CAATGGAAAGTGCAATAGTGCTTGGTAATGAT 89176 28 100.0 32 ............................ TGAATGGAAAGACCGCAAGAGTGATTGGCTTT 89236 28 100.0 32 ............................ GTCTTCACCGTCTTCACCGTGTTCTTGTTCAG 89296 28 100.0 32 ............................ GCCTACGGTATTTGTGCCGCCCGTATTCGTGG 89356 28 100.0 32 ............................ TACGTCCGCCGCTTCCTCAACAATCACGTCTA 89416 28 100.0 32 ............................ GCATACAGCGAGGAAGTCAAACCTTTAGAATG 89476 28 100.0 32 ............................ ATGATCTAAAGCGAGAGAATGCAGTTTGCAAC 89536 28 100.0 32 ............................ TATTCAAGACCCCAACGCTTCCGCTGCAAAAT 89596 28 100.0 32 ............................ GTTAGACGGTGCGGTGTAATTACCGAACACCG 89656 28 100.0 32 ............................ AAAAGCAGTTTGATGTTTTTCGTGAAAACCTA 89716 28 100.0 32 ............................ ATATTTACGAGCGCGGCGCCATACTTTGCCCG 89776 28 100.0 32 ............................ GAAGCAGTGCAGGAACCTAGCAAGTGTAAATG 89836 28 100.0 32 ............................ TTTTAGCGTTCTTTTTCTTTTCCGATCCTTGA 89896 28 100.0 32 ............................ TGTAGGCGTCTTTGCTGCCAAGAAAATGATGT 89956 28 100.0 32 ............................ GTCTAGTGTTATTGTTGGTTTATAGATGGCTT 90016 28 100.0 32 ............................ TTGTTAAAGTCGGCTTGCAGTATGTCGCGATA 90076 28 100.0 32 ............................ TTTTTAGTGTTTTTTTGATTGTTTTGCAATTT 90136 28 100.0 32 ............................ AATAGCCGCCCCAATTGAGCCATAATCCGTAC 90196 28 100.0 32 ............................ AAGCGACAACAACCCAACCAGCGAATATGTAA 90256 28 100.0 32 ............................ AACAACAAAATCATTCTTATCATCGTTCCACG 90316 28 100.0 32 ............................ TGTATGTCGTTTTACATAGTGCTGATCATTCG 90376 28 100.0 32 ............................ GTTCGAAATTCTGTAAAACTGCAATGGTTTTA 90436 28 100.0 32 ............................ ATTGACGTGTTTTTCCATGTCGTCATAAGGGT 90496 28 100.0 32 ............................ TTAATGAGTATTATTTGATTATCGAATTTTGG 90556 28 100.0 32 ............................ GTACGTAGATGCTGTGTGTAAATGGTGGGAAA 90616 28 100.0 32 ............................ CACACGATAAAGCCGAAACGATTGTTCGATTT 90676 28 100.0 32 ............................ ATCATGACAAGATCAGAGCCAGACACAGACAC 90736 28 100.0 32 ............................ CAATTGTGGAAGTTACGCGACAGGTGTCATGG 90796 28 100.0 31 ............................ ATCGAGATAAACGTTTTTTAGTACATTGCTA 90855 28 100.0 32 ............................ GTATCCAGAGCGTCGCTTGCTGCTTCGTTTTT 90915 28 100.0 32 ............................ GTGCGAACGATCAAAAGTAGAACGTTGAATAT 90975 28 100.0 32 ............................ GGCATCAGCAAGTGCAGAAAGAAACGTCGAAT 91035 28 100.0 32 ............................ GCTCATGCTCGTGAAGTTGCTGATTTTGAAAA 91095 28 100.0 32 ............................ ATAACGCTCCAAAAACGGGCTTATACATCATT 91155 28 100.0 32 ............................ GTGCGAACGATCAAAAGTAGAACGTTGAATAT 91215 28 100.0 32 ............................ GGCATCAGCAAGTGCAGAAAGAAACGTCGAAT 91275 28 100.0 32 ............................ ATATTGGGACACTTGCGACTTATTCGAACTTA 91335 28 100.0 32 ............................ ATCACCACCCCACAAACAAAAAAAAGCCGGAT 91395 28 100.0 32 ............................ TGAAACCTCTACATTGCTCACAGTGTTTTCAT 91455 28 100.0 32 ............................ GTGTTCTAAACATGGCGGCGGCGTTAGGGTAT 91515 28 100.0 32 ............................ AACCCGAGCGCCGTCGAAGTCTCGCCCGCACT 91575 28 100.0 32 ............................ TCAAAGTCACCGTACCCAGCCTTCACGAGGCT 91635 28 100.0 32 ............................ GCCCAACGTACGCGCCTATTTATGTTCGCCTT 91695 28 100.0 32 ............................ AAGCAACCCAATCCAGTCTATGTTTGATTCTG 91755 28 100.0 32 ............................ CTAAACTAAACCCACGCATAGCGCCGAAATCA 91815 28 100.0 32 ............................ ATGAGCGTCTAATATTCTTGTAACAAGATTTC 91875 28 100.0 32 ............................ TGAATACGCAGGGCTTCGCACCACGGAAGACC 91935 28 100.0 32 ............................ TCGGTTAAGCTCAAATAATGAGACTCACCGTT 91995 28 100.0 32 ............................ CGCGAGTTTGTCGGATTGCACCTCGTTCCGGT 92055 28 96.4 32 ...C........................ CCATTGAGCAAAGGTTTCTAAGTTGTTGTGCA 92115 28 96.4 32 ...C........................ TTGGTCAGTGATGTAGGCGTTAATATTGGTTA 92175 28 92.9 32 ...C..............A......... TAAGTCTGAAATCTTGCCTAACCAACTAGCCA 92235 28 96.4 32 ...C........................ TTATTCAAGAATGCTACTCAATAAGATATTTT 92295 28 96.4 32 ...C........................ ACCAGTTGAGAAAACTCCGCATCATCAAAAGC 92355 28 96.4 32 ...C........................ ATAAGAAACAACCTCAGCAGACTGAACCACAA 92415 28 96.4 32 ...C........................ AGAAACCGACTTTGAGTTAGAAGACCGTGTTT 92475 28 96.4 32 ...C........................ AATTCGGAATCGTCGCGCAAATGTTCAGGGAT 92535 28 96.4 32 ...C........................ CTTGTTTGCGCCGCTTTGGTATGTTGCTTCTT 92595 28 96.4 32 ...C........................ ATCTGTAGAAAAATTTGCAGAATCATATATTT 92655 28 96.4 32 ...C........................ GTTAGGTAGAAGCTCTATTGTGACTGTGGGCG 92715 28 92.9 32 ...C.......................G TGCACCATGAATAGTGTTGTAGTACTTCTTCC 92775 28 96.4 32 ...C........................ TCAATGACTTGATAGGGTCGGTTTCGATCGCG 92835 28 96.4 32 ...C........................ GTTAGTTACTGGATGGAACGTCCATTGCATGA 92895 28 96.4 32 ...C........................ GATACCAGCATCTCCACCGCGCAAAACATTAT 92955 28 89.3 32 ...C........A..G............ TTCGCTATCGTCGTCCGTTCGGGACAGTGTGA 93015 28 82.1 32 C..CA.......A..G............ TGCTTAACCTTCCCGCTTAAATCCTTCTGCCA 93075 28 82.1 32 C..CA.......A..G............ GCTATACAGAAAAAACACACCTAAACAAAAGA 93135 28 82.1 32 C..CA.......A..G............ ACATGCAGTTGCCCTGCGGTTTTTGATTTCGA 93195 28 82.1 32 C..CA.......A..G............ ATAGATGTTCAAAAAACATCAGGAAATGAAAT 93255 28 85.7 32 C..CAT...................... GCAACATGGACACACCAAGACAACATCACGAG 93315 28 96.4 32 ...C........................ AAGACCAATCCTATTTATTCTCAGCAAGTGAA 93375 28 92.9 32 ...C.....T.................. GTTTAGCGATGCCTTAGTTACCACATCAATAA 93435 28 96.4 32 ...C........................ GACAAAAAAGAAGAAGCTCAATACCGCACCGA 93495 28 92.9 32 ...C...........A............ AAATTGAAACTCACCAAGCGCAAGCATTACAT 93555 28 82.1 0 ...CA.......A..G....T....... | ========== ====== ====== ====== ============================ ================================= ================== 106 28 98.1 32 GTTTGCCGCCGAGCACGCGGCTTAGAAA # Left flank : GCGTTTGAATCTTGGGAAATGGCTAAACCGTCTTGAAGACTATGTTCACATAAAAAGCATTGCTGAGGTACCGAGTGACGTCGTGGGCTATGAGTCGTTTAACCGTCGCCGTAAATCAGGCGCGCCTGATAAACACATAAAACGCCGCATGCAACGCCACAACGAAACACTGGAGCAAGCGGCAGAATTTTTTAAAGGTTATAACATGGCAAGAGAAGATAAAGCCTTACCCTTTATCAGAATGAAAAGCCTACACAGCGACAATGAGTTTTGTATGAGTATCATTCGAAAAGAGGCCGTACCATCGAACAGTAGTGTCATGTTCAATACTTATGGGTTAAGTGCAAAAGGTGTTTTACCTAAGTTTTAACCAATAAAATTTGCTCTTTAAAAATATACTTTAAAAACAGCAAGTTACAATATGCAGAAAAAACATAGGTAAAAACGCTTATTTTTGCCTAACTGCATGTTGTAACTTATTTTTTTGCGAATAAACTATA # Right flank : AATGTAGATAAATAAATTAATAGGGTAGAATGCACGAGATTATTCATCCTATTAAAGGGAGCTATGTGATGTTTATGCGTTATATTTTTGGTTTTGTGTGTTGTTTTTTAAGTACTATATCATTCGCTCAAAGCTGTGAGGTGAAAGTTGAGCCCAATCATTCTAAGTGGTTTGGAGCTTATTTGGGGAGTGACATTGATGATGTGAAGGCATATCTTAATTGCGAGAACCTGTTGTTTTCATATGAAGTTCCTCCAAAATTAAATCAAGAAAACTATGTGAAAAATCAGTTCTTATTTGTCGATGAAGACTGGCAGCCAAGTTATATCGATCCGAGTGCTACTATTGCTTATGCTTTTGATCCTGCAGGTGAATTGTTTGATATAACTATCTCTTGGAAAAGTATGTCAGATAATAGTTTTAATGTATTGCTTGATTTTTTAATGGAAAAATATGGTAACGAATCCGTTAAATTTAATAATGCTTACTTATTTTATGAC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCGCCGAGCACGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.40,-6.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //