Array 1 1274889-1280454 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMIX01000002.1 Acinetobacter calcoaceticus TG19588 A_calcoaceticus_TG19588_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================================== ================== 1274889 28 100.0 32 ............................ TTGTTAAAAAGATCGCTAATGAGGTTGTAGAC 1274949 28 100.0 32 ............................ TCCGCCTCCTCGTTCCTCGTCGTTGTCGTCGT 1275009 28 100.0 32 ............................ GCAAGCGACAATGCAAGTTTGGGCATTCGTAA 1275069 28 100.0 32 ............................ AGCACTCGGAGAAGCTTCAGCAATAGCAATTT 1275129 28 100.0 32 ............................ AATAAAAAAGGCGGATGCGGTGCGTACGGTCG 1275189 28 100.0 32 ............................ ATTCAGGATGGTTCCAGAAACCGTATTGATTA 1275249 28 100.0 32 ............................ TCTACGACGGGCATCGCGTTCTTCTTGTTGGA 1275309 28 100.0 32 ............................ AATACCAAGAGATGTAAACGCTATTAGAACTA 1275369 28 100.0 32 ............................ AAAGTAAAAGCTTGGAGCCAGTCAATGAAATT 1275429 28 100.0 32 ............................ TTGTGAAGCAGACATTACATTTGAAATGGTGA 1275489 28 100.0 32 ............................ CCACTCCACCATCGTCATTTCAATATGGAAAA 1275549 28 100.0 32 ............................ CAGATCCCGCCGACTCCAGCCCTCACACCTGA 1275609 28 96.4 32 ...............A............ AGAAACACGACTTTGAAATATGTAAGATCTAT 1275669 28 100.0 32 ............................ AATCGCCCAAGGCTCTCCATTCACAATAGGAT 1275729 28 100.0 32 ............................ AATTCACAGCTATGGGTGTTCACTCAGTAGTA 1275789 28 100.0 32 ............................ ATGTATTAAAGATAAGGCTTCAATTGCCAGAT 1275849 28 100.0 32 ............................ ATCATTATCTAAAGAAGATTTAATTTTTTCTT 1275909 28 100.0 32 ............................ ATTCACGTGAACATGCAAAGTCTGTTGCTGAT 1275969 28 100.0 32 ............................ TTCAAGATGTTTACCCGGCAGATGATGAACCG 1276029 28 100.0 32 ............................ ACAGCTTTATTCGCAGCTTTGAGACCTGCATC 1276089 28 89.3 32 ...CG.......A............... AACAGTACAAATATTTCAGCGTTGCAGGAAGC 1276149 28 82.1 32 ...G......ATGT.............. ATGAACCTTTTGCTCATTTCAGTATAGACACT 1276209 28 82.1 31 A..CG.......A...G........... AAACTAGAAACCAATATTTATTTATGTCTGA 1276268 28 82.1 32 T..T......A.AT.............. TTTAAATCAACAGCAACTTTTGCAACATTCCC G [1276272] 1276329 28 89.3 32 ...G........GT.............. ATTTCACCGCCGCTTGTCTGCATGAAGTCACC 1276389 28 92.9 32 A..G........................ ATAAAATATTTGTTCCGTAGAGCGCTTCTTTC 1276449 28 92.9 32 ...CG....................... TGCTCAAGATTATGTTGATCGAACTCTCGACA 1276509 28 96.4 32 ...G........................ TTACGGCGTTTTATCTTGTTCCATTTCTTCTC 1276569 28 96.4 32 ...T........................ CTTCATTAAAGAAGTTCATATTTTTTAATTTT 1276629 28 92.9 32 ...T........A............... CTACTCCTTGATTACAAAATCCCTTAAATCGT 1276689 28 96.4 32 ...G........................ ATGTCGGTTTTCAGCAACTTTTAAAGCCTAAT 1276749 28 100.0 32 ............................ ATCCCCGTTTGCATTGTGTCATACAGCCGTGA 1276809 28 92.9 32 ...G........T............... TCATAAAAGAAACGGCCATTTTCTGAATAAGT 1276869 28 92.9 32 ...G........T............... CAAAAGCGTTCACGGTCTTGTTGTCTTTCTGC 1276929 28 85.7 32 A..CA.......T............... ATTTCACCACCGCCTGTCTGCATAAAGTCACC 1276989 28 85.7 32 T..G........T......G........ GGTGTTTGTGTGACACATACAGAAGTTGCCGC 1277049 28 85.7 32 ...CA.T......T.............. ATTAATTGATGCGTTCTGGCGCGCAATGATAG 1277109 28 92.9 32 ...T.........T.............. TATGTATTGGTTACGATAGGCAGTACGAACTT 1277169 28 89.3 32 ...CG......T................ TTGTGCTTAGATCCTTAAAAATGGCCTTTGAT 1277229 28 89.3 32 ...G........AT.............. GCGATATGTTTAGCAAAATGCCTGATTGGATG 1277289 28 92.9 32 ...CG....................... CCAACCACACTTTGATACTCAACGCTAATCTC 1277349 28 92.9 32 ...CG....................... CTAATAAGCCAGTCATTGCTGTGGCTTGTTCA 1277409 28 92.9 32 ...CG....................... CTACACTCCTGAGCGTTTTGCAGCAGCCATCT 1277469 28 92.9 32 ...CG....................... CATGCAAATACGATAATTTCAACTTCTTCAGC 1277529 28 92.9 32 ...CG....................... AATTCCATGAATCGTGCTTTAAGTTCTGCGGT 1277589 28 92.9 32 ...CG....................... AACTAACAATTTGTTGCTATTGGGATCATTCG 1277649 28 92.9 32 ...CG....................... ACCATCAAGCAGCCAAGTACCTTCTTTGGGAA 1277709 28 92.9 32 ...CG....................... GTGAAGATGGTAAAAAATACCTTTCTGATAAC 1277769 28 96.4 32 ...G........................ CACAAGCTTTAAATATGATTGATGCGTATGGT 1277829 28 92.9 32 ..CG........................ TTCGTCAAGGGCTTTGGCGCGGCGTCTTAATA 1277889 28 85.7 32 ...CG.......GT.............. AATAAAAAACTAGAAGAGCAAGCTGCTGTTGC 1277949 28 96.4 32 ...G........................ AACCATTTTGTTTTGTTGAACGTGAGCTTTGA 1278009 28 96.4 32 ...T........................ GTGAGGATGCCAAAACTCATAAAGCACATTGT 1278069 28 92.9 32 ...CG....................... ATGACGATAGAAAACTGCCGCTGCATTTCACG 1278129 28 96.4 32 ...G........................ AGCAAGGCGATAAGTTGAGGTGATGCTTGTCT 1278189 28 85.7 32 ...GA.......GT.............. AGAAGATATATACGAAACTGGCGAAGCCTTAG 1278249 28 89.3 32 ...T........AT.............. TTTAGCGATCCAGTAGTGATTAACACTCGGTG 1278309 28 92.9 32 ............AT.............. ACGTTAGCTATCGATATAGACCGAGAAAGCAA 1278369 28 92.9 32 ............GT.............. AGTCTATGCAGTGCCATTCTTTCCTGAAAATG 1278429 28 96.4 32 ...G........................ AGTACGGGCAATATCAAACTTCGTGGTGGACA 1278489 28 92.9 31 ....T........T.............. CCTACGGGCAACATCCCTAACACACCCACCT 1278548 28 89.3 31 CA..........A............... AAGTTGGTTGAACCATATTCTGATGGGGTAA G,G [1278551,1278573] 1278609 28 85.7 32 ...CA......TT............... TATCTTTCATTAACTTTGCATAAGCATTTAAA 1278669 28 89.3 32 ...G........AT.............. CTGATCAAGTGCAATTTCATCCTAATGTAATT 1278729 27 82.1 32 ...CG......-.T..........T... ATCTTAATGCCAATAGCTTTAGCTTCCGCGCT 1278788 28 85.7 32 ...CG.......AT.............. TACATACTTGCTGTCACCTTTTAGTACTTCAG 1278848 28 89.3 32 ...G........AT.............. TCCTTTTCTCAGGTTGCACAGCTCATACTGTT 1278908 28 89.3 32 ...G........GT.............. AAAGTCATCAAATGTAGTAATTAAATGTGAAC 1278968 28 92.9 32 A..G........................ ATTCAGTTTTTTGCACAAACAATTGGTATGCA 1279028 28 96.4 32 ...G........................ GTTATGAAATGCCTGAGTTACAGGAACATCAC 1279088 28 92.9 32 ...G........A............... AATCCTTTTGACTGCTGATATGTACGAGGTAC 1279148 28 89.3 31 ...G........AT.............. AAGTTGGTTGAACCATATTCTGATGAGGTAA G [1279174] 1279208 28 82.1 32 ...CG......TT..............G AAAAACACAGCAAATTTGCGCAATGGTTATTT 1279268 28 92.9 32 ............AT.............. TCTATTGCTGTTCCTGGTAGTAGAATATCTGT 1279328 28 96.4 32 ...G........................ TCTTTAGTGGTCGGATCGATGACACGCATATA 1279388 28 85.7 32 ...G.......TGT.............. CAAATGACATCTAGAACATCTAACAGATCTTC 1279448 28 96.4 32 ...T........................ TGGACAATCTGAGCCTTCACCGCTTCCAACCC 1279508 28 89.3 32 ...G........GT.............. AGTACATGCAACGACAACAATCGTTAAGCAAA 1279568 28 92.9 32 ...G........T............... ATGCATCGGAATCACCAAATACATGTGTCTGA 1279628 28 92.9 31 ...CG....................... TGCTCGGATCTAATCCTATTCCGCTCATAAG C [1279653] 1279688 28 85.7 32 A...T.......GT.............. TTTGATATTTTCAGAATATTAATTAGTGGGAT 1279748 28 89.3 51 ...GT........T.............. TGCATGAACATTATCAAGGACTTCCATTAACAATTGATAAGCCTTTGTTCA 1279827 28 92.9 32 ...G.....T.................. TCAATCAGTAACGTCTTTTTTGGTGTGACATC 1279887 28 85.7 32 ...G.......TGT.............. AGCTAATTTAATGCAGCCATGTGAGCGATTTA 1279947 28 92.9 32 ............AT.............. TAACGGGGTTAGAGCCAAAATCTGGCCATACT 1280007 28 92.9 32 T..G........................ AATGAGGTTGTGTTGCTACTGACACCTGAAGG 1280067 28 92.9 32 ...CG....................... TATCTGCAATGGAAGGTACTTCTTCTGCCAGC 1280127 28 96.4 32 ...G........................ ACGTCTTCTAATGGTGGACTCTAGTCCAATAT 1280187 28 85.7 32 A..GG.......T............... TGCCGTGGCGGTCCCCCTTCTGTTTCTTGTTC 1280247 28 89.3 32 ...T........AT.............. TCGCAATAAAAAACCACTCGAGAGTGGCTTAA 1280307 28 89.3 32 A...T.......A............... CACAAGACATGGGCGCTTAGCTCTTTGTGGTA 1280367 28 89.3 32 ...G........A.......C....... ATATTGCGCAAAGTTCCATTTATACGCGCTTC 1280427 28 75.0 0 ...CG.......T..A.A......AT.. | ========== ====== ====== ====== ============================ =================================================== ================== 93 28 92.7 32 GTTACTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACATTATACAAGCAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGAAAAAACTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAATTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTGATGCCACTCGCCTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATATATTTAACCCAAGTACCTCATAGCGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTGAACTTAACTCTA # Right flank : ATTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGTTTTTCACGAATTTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCATTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCTTGTGACCCGACGAACAGGGTACAAGTTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTACGGTCGGGTTCCTAAACCACAAGTATTCTAGGAAGCGGACAAACTGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTAAAATATGCAAATTTGATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCAGCGTCGAAGCCAATAACATCCCCATGAATGTATGAGCATCATAGCATAACTAAAATAAAATACTGTGCATTTTATCAACAGTCCGCTACTGATGAACATATTTAC # Questionable array : NO Score: 5.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACTCATCGCCCAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTACTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [32-99] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //