Array 1 5161-4729 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJTU01000034.1 Epilithonimonas hominis strain DSM 22165 H5297_contig_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 5160 47 95.7 30 T..T........................................... TGTGGATGCTAAATTAAGATTCACGAATAA 5083 47 100.0 30 ............................................... GACAACATTGTTAATGATTTTCATTGCTGT 5006 47 100.0 30 ............................................... GACAACTCAAAACTCAACTGATGATTGGTT 4929 47 100.0 30 ............................................... TCTGATAGATTCAGAACACACACCGAGTTA 4852 47 100.0 30 ............................................... GTAACGGCAAAGATGTCGTTACCATTTTTA 4775 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 6 47 99.3 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGGACAAC # Left flank : AATAAAATATTTTTTTTACAACTGAGACAAAAAGGCACAGTATGTGATAGTATCCCATCAATCACACTAAAAAATAAAATTATGAGAAGTCTATTATGGTTAGTCGCTGCTATTTGTATTGTAGTATGGCTATTAGGAATGCTGGGCGTAGTACCAGGAATGAGTACAGGTTATCTGGTTCATATATTATTGGTAATCGCTGTTGTAGTGGTATTGTTTAATATTATCTCTGGCAGAAAACCTCTTGACTAAGTTTTCTTTCCACTGAATAAATAAAAACAGCTTGTAAATATTTACAGGCTGTTTTTTATGTAAGTCAAGGCTGATTATGGATGTTATTAAAATTGGATTTAATTAAATAAAATGAAAAAAATAATACCGCAAAAAACAGTTTTCAATCATTTCAAGTTATTTTTAATGGCTAATAGTTAGCATTTATTTAAACACTACTACCTTCCTCACATGATATAACTTCCTTCCGCATCAAAACTTACAATCCA # Right flank : CTCAAAAAATAATCTACTGATTTTCAGTAGATTATTTTTGTTCTCAGGATTTAAAATTCAGAACAATTCGAGCTGTTGAAAGGTCGGTGGCGGTTCTTCTTTATTTCTGGCAAAAAAGATTTCGATATCTCCAAACTGTTTATCGGTAATGCACATAATGGCAACCTTTCCGGCTTTCGGAAGCATAAATTTTACTCTTTTGATATGAACTTCTGCATTTTCGCGGCTTGGACAATGACGCACATACATCGAAAACTGGAATAAAGTAAATCCGTCATCAATCAAAGCCTTCCGAAAACGGTTTGCATCTTTCATATTGGCTTTCGTTTCGGTCGGGAGGTCATATAATACTAAAACCCACATAATTCGATATGCATTAAACCTTTCGGCGTTCATTTTTGGTGACTATTGTTTGTTTGTCATAACGTTTGCAGCCCGACCTGAGTGGAATCCTTCGACTCCGCTCAGGATAAACTACAGGCGGATAAAGCTGCCATAAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGAACAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-2.70,-2.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //