Array 1 5161-4729 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_RJTU01000034.1 Epilithonimonas hominis strain DSM 22165 H5297_contig_7, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                                	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	===============================================	==============================	==================
      5160	    47	  95.7	    30	T..T...........................................	TGTGGATGCTAAATTAAGATTCACGAATAA	
      5083	    47	 100.0	    30	...............................................	GACAACATTGTTAATGATTTTCATTGCTGT	
      5006	    47	 100.0	    30	...............................................	GACAACTCAAAACTCAACTGATGATTGGTT	
      4929	    47	 100.0	    30	...............................................	TCTGATAGATTCAGAACACACACCGAGTTA	
      4852	    47	 100.0	    30	...............................................	GTAACGGCAAAGATGTCGTTACCATTTTTA	
      4775	    47	 100.0	     0	...............................................	|                             	
==========	======	======	======	===============================================	==============================	==================
         6	    47	  99.3	    30	GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGGACAAC	                              	       

# Left flank :   AATAAAATATTTTTTTTACAACTGAGACAAAAAGGCACAGTATGTGATAGTATCCCATCAATCACACTAAAAAATAAAATTATGAGAAGTCTATTATGGTTAGTCGCTGCTATTTGTATTGTAGTATGGCTATTAGGAATGCTGGGCGTAGTACCAGGAATGAGTACAGGTTATCTGGTTCATATATTATTGGTAATCGCTGTTGTAGTGGTATTGTTTAATATTATCTCTGGCAGAAAACCTCTTGACTAAGTTTTCTTTCCACTGAATAAATAAAAACAGCTTGTAAATATTTACAGGCTGTTTTTTATGTAAGTCAAGGCTGATTATGGATGTTATTAAAATTGGATTTAATTAAATAAAATGAAAAAAATAATACCGCAAAAAACAGTTTTCAATCATTTCAAGTTATTTTTAATGGCTAATAGTTAGCATTTATTTAAACACTACTACCTTCCTCACATGATATAACTTCCTTCCGCATCAAAACTTACAATCCA
# Right flank :  CTCAAAAAATAATCTACTGATTTTCAGTAGATTATTTTTGTTCTCAGGATTTAAAATTCAGAACAATTCGAGCTGTTGAAAGGTCGGTGGCGGTTCTTCTTTATTTCTGGCAAAAAAGATTTCGATATCTCCAAACTGTTTATCGGTAATGCACATAATGGCAACCTTTCCGGCTTTCGGAAGCATAAATTTTACTCTTTTGATATGAACTTCTGCATTTTCGCGGCTTGGACAATGACGCACATACATCGAAAACTGGAATAAAGTAAATCCGTCATCAATCAAAGCCTTCCGAAAACGGTTTGCATCTTTCATATTGGCTTTCGTTTCGGTCGGGAGGTCATATAATACTAAAACCCACATAATTCGATATGCATTAAACCTTTCGGCGTTCATTTTTGGTGACTATTGTTTGTTTGTCATAACGTTTGCAGCCCGACCTGAGTGGAATCCTTCGACTCCGCTCAGGATAAACTACAGGCGGATAAAGCTGCCATAAA

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGGACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:68.09%AT]
# 	Reference repeat match prediction:         R [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGAACAAC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-2.70,-2.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [76.7-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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