Array 1 3115586-3112072 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWCH01000001.1 Acinetobacter baumannii strain DMS06669 DMS06669_scf_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 3115585 30 93.3 30 ............................TA TCTAAAAGATGAAATAAAATCCGCTAGCAT 3115525 30 93.3 30 ............................CT CAGCCGATGCAGATTTCTTTCTCGATTGTG 3115465 30 96.7 30 .............................T CGGAATTTTGTTTACAAGTTCGCAAGGGAA 3115405 30 100.0 30 .............................. CTTCGGCTTCAGAACCTCAGCCGATTGATC 3115345 30 93.3 30 ............................TA CAGCAATCACAACCAAACCGATATAGGTAA 3115285 30 100.0 31 .............................. TCCGTATAGCCGCCCGAGTAGTATGAACCCT 3115224 30 96.7 30 .............................A TGTGCTTGGCTTTAATGGGACTAATGCTCG 3115164 30 93.3 30 ............................TG GCAAAGGAATATGGCCGTCTAATCCAACTT 3115104 30 96.7 30 .............................G CTACGAAAAAACAGCGAAGCGAGGGCCCGC 3115044 30 93.3 30 ............................CT TCAATGTGTTTAAGATCGGGTCAAAAGCTA 3114984 30 93.3 30 ............................TT ATAGATGGCTTTAACTGACTCCCAGCCCAT 3114924 30 96.7 30 ............................G. AGAATACATTTATAAATGCAAGAAGTGCGG 3114864 30 96.7 30 .............................T GCAGCACCAACAGCACCGACAGCAATCACA 3114804 30 96.7 30 .............................T GCAGCACCAACAGCACCGACAGCAATCACA 3114744 30 96.7 30 .............................T GCAGCACCAACAGCACCGACAGCAATCACA 3114684 30 100.0 30 .............................. TCAACAATCAGTCGGTAATGGCGAAAGTTG 3114624 30 93.3 30 ............................GT ACCGGGTTGTAAATCCTGTATCAACCAACT 3114564 30 93.3 30 ............................TG CATGACGATCTACATCTGCATACATTACGC 3114504 30 96.7 30 ............................G. ATAATCTGGATAGTTAACAGTAATATCAAA 3114444 30 96.7 30 ............................T. ATGGATGCCAATGTTGATTGGGCTTATTCA 3114384 30 93.3 30 ............................TA AGGCCTATGGCAAATTTGAAGAAGTAAAAA 3114324 30 100.0 30 .............................. TTTAAAGCTAATGATCGTCATAAATATTTC 3114264 30 96.7 30 ............................T. CATATATTTTTCTTAATTCTTCAAGTGCTT 3114204 30 93.3 30 ............................GG GTTATCAAAACGCTTATATATACGCTTTAA 3114144 30 93.3 30 ............................TA TACAGGGTTCTGTTACTTCTGATTTAAATT 3114084 30 96.7 30 .............................G ATTGAGCAAGAAGTCATTAATCGCCAGAAC 3114024 30 93.3 30 ............................CG CATAAGGCCGATGAAGCCAAATCAAAAACT 3113964 30 93.3 30 ............................CA TAAAAGACCAGAAATTAAAGGCCCTTCAAT 3113904 30 93.3 30 ............................TA TTTATTTTGAGCCCAATACACCAATCCCGC 3113844 30 96.7 30 .............................T ATCAACCCCGTTGTTTAGGTGGTGATATTT 3113784 30 96.7 30 .............................A AGGTGAAATAACCAGCCACCATCATGACAA 3113724 30 96.7 30 .............................A ACAATGAGGACCTAAACCAATGAGTTTGAA 3113664 30 100.0 30 .............................. TTTTGAACATTTCTAATGATGAAATTGATG 3113604 30 96.7 30 .............................T TTGGGCATCTATAAACAGCTATATGCCTGA 3113544 30 96.7 31 ............................C. TGAGCTATTAGCTAAAGAAAGCAGCTTTAAC 3113483 30 96.7 30 .............................G TAGCAAGTTTTAGGGCGCTTTCAGTTTTTC 3113423 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 3113363 30 96.7 30 .............................G TTGATATGATTATTAATATTAAAGTTGTTT 3113303 30 93.3 30 ............................TG TGCCCATTCCCGCAAACACGGCGCAACGCT 3113243 30 93.3 30 ............................CA TGACCCAACCACGTAAATTCATACCACACG 3113183 30 100.0 30 .............................. CGTCGTTCTCATTTATTCGATTGATATCAA 3113123 30 93.3 31 ............................TT CGGCATCAATTGACGATCACCTTTGATGTAG 3113062 30 96.7 30 .............................A ATTGTTTTGTCTTCATATGGAGATACCCTA 3113002 30 96.7 30 ............................T. GAACAACGCCCAGTAGAAAAGAATTAGGAG 3112942 30 93.3 30 ............................CA TAAGGAAAGGGAAGAACAAAGCAACTAACT 3112882 30 93.3 30 ............................TT AAACAGAACATTCACGCACTGGTTTAATCT 3112822 30 96.7 30 .............................A AACTATTTTTAGCATTTACCTCACCGCATA 3112762 30 96.7 30 .............................A AACTATTTTTAGCATTTACCTCACCGCATA 3112702 30 96.7 30 .............................A AACTATTTTTAGCATTTACCTCACCGCATA 3112642 30 93.3 30 ............................TT TTAGCTTAGCTAGAACAAATAATCCAGTTG 3112582 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 3112522 30 100.0 30 .............................. CAGAAAAGCAGAGTAAAGCTTCACAGCCAT 3112462 30 93.3 31 ............................GT AAAAAAGAACATTTCCAGCAAAAATTGACGA 3112401 30 100.0 30 .............................. TGGAATTCAGCAGTAAATAAGGGGTTAAGA 3112341 30 93.3 30 ............................TT TAAAGCTAAATGAGGGTTAAACCTAAGAAA 3112281 30 93.3 30 .......T.....................A CGTGAACAATTGTTTTAGCTTTGAACATTA 3112221 30 86.7 30 .............C...T..........GT TACTGGGTTGCGGAATATATTCGCAATTAT 3112161 30 86.7 30 A......A.........T...........T TTTGATCTTTACTTATTCTCGCTTCAAACA 3112101 30 66.7 0 .......A...T.....T..C...AGCGTT | ========== ====== ====== ====== ============================== =============================== ================== 59 30 94.9 30 GTTCATGGCGGCATACGCCATTTAGAAAAC # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.17, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //