Array 1 46068-45687 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCXN01000068.1 Vibrio breoganii strain 10N.261.52.F6 10N.261.52.F6_contig_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================= ================== 46067 37 100.0 31 ..................................... GTTGGCAGCAAGCCAACGCTGAAGCCTTTGT 45999 37 100.0 32 ..................................... GTCTGCTCTCGAGCAAGACCTGACCATCAACA 45930 37 100.0 33 ..................................... TTCATCAGTTTCCACTGTCACTTCTTTCATTAA 45860 37 100.0 32 ..................................... AGATCTCTACCCCAACCCACAAACGACATTGC 45791 37 97.3 31 ....................................C CAGACGTCTGCGAGGTCTGACCGTCCGTTTG 45723 37 94.6 0 ................................T...C | ========== ====== ====== ====== ===================================== ================================= ================== 6 37 98.6 32 GTCTGAAACTCGCCCTGTTCTTAAAGGGATTAAGACA # Left flank : TTGAACTAGGACGACTCGATTTATACGACCAAACTATTAGTTCAGAGAAAGCTGTGGAGCTTTATTTGATGATGTTTAAGGCGCTCTTGATTCTCTTTGGGTTTTACTTATTTTCAATATGCCTTGAACGTTTGGCGATTCGCTATGCCCTCTATAAATACAATCAAGTGAGGCAGGAAAATGAAAATCTCACCAATTAAACCTATCCCTAATCTGTCCGATATTGATGTGACCGTGACCACAGCTGGGCTTATTTTAACCTAAGGAATAAGCCCCCAAGGCACCAAAATATTCAATGTGATAATCAAGTTTCGGCAAGGTTCACAAATTCAGTGAACTACAGCTCAAAAAGCATTTAAAACAGTAGCTTAAAGCAGGATTATTGAGTTAAGATACCCCACGGTCAAGCAACGAAATAATCGTCAAGTTTATGAATTTGCAAATCTCCGATAAGCCTAGTTTTAATCTATTGATTTATAAGGTTTTTTAGGTGGATTGCT # Right flank : AATCACCTTTAATACCCACAACAAGCGAACGTCTGAAATTCGCTCTGTTTTTATCCACTCCTCTATTCTGACCTTATGGCTTATGGCTACAAATGTGATCTCCCCCTAAGTCAAAAAGTAAAAAGTTATCAGCATAAAAAAAGCCGACTTTTAAAGTCGGCCTTAGTGGCAAGCACTTGGTTAATTTACCTATACCTAAAGGTAATATTGGATGATTTTATCTTCAGCCCCTTCGTCTGAATGGGTTTCTTTAGTTCTTTAATCTTAATGTTGTTTACTTCCTGGATTTTATAGTGCCCACCAAACCTACTACCTAACTCACCTTCGATAGCGCCATTCACTTCAGAGAGTAACCTTACCCACAGACTGTACTGCTTCTTATGGACCACCGACTGGCTTGTTAAACCGTCAATATCGAAAAGGTCTTGTGCCCCTTTTCTTTGAAATAGGAATATATCACCTTGATACCGCTCGTCGATTAAATCCAGCAAATGATCCTC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACTCGCCCTGTTCTTAAAGGGATTAAGACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 49216-48902 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCXN01000068.1 Vibrio breoganii strain 10N.261.52.F6 10N.261.52.F6_contig_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 49215 36 100.0 34 .................................... CTCAAATTCCTCGGGCGATACTGTGCTTATTTCA 49145 36 100.0 34 .................................... CTACCATACCCGTCAAGGTTTCGGCCCTCACCCT 49075 36 100.0 33 .................................... CTGACTAAAAAAGTTAACCCCAGAACCGTTAGT 49006 36 100.0 33 .................................... ACTAGATGGCTTGCAATGAATGCCGCCATCATG 48937 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================== ================== 5 36 100.0 34 GTCTGAAACTCGCCCTGTTCTTAAAGGGATTATGAC # Left flank : GGATCTTGTGTTACGACATTTGCGATGCAAAGCGCTTGAAAAAAATGCATCGCCTCGCTTGTGAATACGGAGTGCCTATGCAGTACTCGGTATTCCTAATCCAACTAAGCCAAGCGCAACTAACACAATTGGCAAAGGATATCGAAAACACCATAGACAATAAGGAGGACAACGTGAAGATTTACCCGATCAAACATATACCCAAAGAATATCTTTCCGATATTGGTGTGACCGTGACTACAGATGGGCTTATTCTGACCTAAACAACCAAGGCACCATTATATTCAATGTGGTATCAAGAGCAGGTTAATTAGGCAAGGTTCACAAATTCAGTGAACTACCGCTCAAAAATCATTAAAAACAGTAGCTTAAAGCAGGATCATTGAGTTAAGCTACCCCACGGTCAAGCAACGAAATAATCGTCAAGTTTATGAATTTGCAAATCTCCGATAAGCCTAGTTTTAATCTATTGATTTATAAGGTTTTTTAGGGGGCTTGCT # Right flank : GCCCCCAACAACCAACAACCTACGAAGAAAAATAGTCTGAAACTCGCCCTGTTCTTAAAGGGATTATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACTCGCCCTGTTCTTAAAGGGATTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //