Array 1 258595-259618 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLVT010000001.1 Enterococcus sp. MJM12 scaffold2.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 258595 36 100.0 30 .................................... TATCTACATGTTTCATCAGTTTTACCGACT 258661 36 100.0 30 .................................... ATCACTTTGCAACTTTTTTCCTTCACCTGA 258727 36 100.0 30 .................................... AATAGAATTACCTTGAACATCTTGTCCCTC 258793 36 100.0 30 .................................... GTTCTTTAGTTGCTTTAGCTTCCTCAACAA 258859 36 100.0 29 .................................... TAACCTGTTTGATTTCATCTACTGTTACT 258924 36 100.0 30 .................................... CTGTAGCGCCAGTATTAGGATCATGAATAT 258990 36 100.0 30 .................................... CTTTAATCGTCATATTCAGTCACCTCAAAA 259056 36 100.0 30 .................................... TCCTCCACATTTCCACCAAACGAATTAACT 259122 36 100.0 29 .................................... TGGCTAAAAAAGTTGAAGAAACAATTGAA 259187 36 100.0 30 .................................... TTTTTGGTAGTTTTAACTACAAAAATGAGT 259253 36 100.0 30 .................................... ATGGAAAACCTCTTTTCAAGGATTGGGATG 259319 36 100.0 30 .................................... TTTAACGAAGAAATCACAAGTTATTCATTG 259385 36 100.0 30 .................................... TACCCTGGTCAATCAGTCAGATATTTAGGC 259451 36 100.0 30 .................................... AGGTACTACAGCAGAAACCGTCCTTTCTTA 259517 36 100.0 30 .................................... AATCCTTCGGTAAAACCTGACTATTGCCAT 259583 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 16 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGTCTCCAAAAC # Left flank : GTGAAATCAATGATTGATAAATTGACAGCTACAATCAGTGAATTGATTGGTTATGAATTGTTAGAGCATGAACTAGATTTAGAAGAAGATGAAATTACAGTTAACGAACTTTTTAAGGCGTTAGGTGTAAAAATTGAAACAAGAAGTGATACAATTTTTGAAAAGATGATAGAGATTATTCAAGTATACAAGTATCTTTCCAAGAAGAAATTATTAATCTTTTTGAATACATGTTCATATTTAACACATGATGAAGTTGATGAATTACAAGAGTATATTTCATTGAATAATGTGGACGTTTTTTTCGTTGAACCAAGAAAAATAGAAGATGTTAGACAATTTATTTTGGATGAAGATTTTTTCTTAACAGAAAAAGATGTGTAGTAATTCTTTGTTCTTTGAAAATTAAATATATAAAATTTCAACAAAACGGAGATATTCTTTATTGAAGTCTTGCTATGGACTAGTAGCGCGATTACGAAACCCCAAAAATCTACGAG # Right flank : CAAATTAATTTTTATTGATGCTTTAACTATCGTTTTAGAGCTATGTTGCAAGAACAGGCTTCTAGTGTGTTTTAGAGCTATGTTGTTTTCAGTTAGTTGTATTTTCTATTTCCCGATGTAATCTCTTTCATTAACTGATAAAATTGAGATAAGAGAAAGTAGAAAGAGGTTTACTATGACACAATTTAAAATTGCATTTTTTGATATTGATGGAACACTAGCTGACAATGAATTGCCCCATGAGATGGGAATTTTGCAAAGAATTCCAGCATCAGCTAAAGAAGCATTACGGCAACTAAAGCAAAATGGGATTGAGCCTGTCATTGCGTCAGGTCGAAATCATTTGATGCTGCGGGAATTTGCAGCAGAGTTGGGGGTAGAAAGTTTAGTTGCTTCTAATGGTACACAGGTTTTGTATAAAGGAGCAGAGCTAGCGCTTCATCCAATTGATCAGCAGACATTGAAAGCGACGATGGCGGAATTTGATCGGCAGAAAATTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGTCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //