Array 1 22062-26428 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYOM01000028.1 Photobacterium angustum strain ATCC 25915 CFSAN065435_28, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 22062 29 100.0 32 ............................. TACGGATGACATTGCAGTAATTAAACTTACAC 22123 29 100.0 33 ............................. GGGATAAATTGCCGCCAAGAGGGAAGGCTCAGC 22185 29 100.0 33 ............................. TGAGGAACCAATACACCAGCGATGTTATCTACC 22247 29 100.0 32 ............................. CAAATGAATGAATGCAAAAGTGAAATTGATAA 22308 29 100.0 32 ............................. TTTTCAGTAAAATTATAATAATTCATTATAAT 22369 29 100.0 32 ............................. TAATTAATTGCACTAAAAACATCATCGAAACC 22430 29 100.0 32 ............................. TGCGTGAATTGCCAAAAAATTTGGATTCTATC 22491 29 100.0 32 ............................. GTACTTGGCCTAACGCTGTATCAACAGGAACC 22552 29 100.0 32 ............................. TATGTTCCTTGGTGTCGTGTTGGCGAAGGAAA 22613 29 100.0 32 ............................. CATTAATAATTATTATAATAAAAAGGATGCTG 22674 29 100.0 32 ............................. ATGGCAGCTGCAACAGTTGCTGAATATCCAGA 22735 29 100.0 32 ............................. GTCTATTCGACCACGCTTTTAACACGTCCTGT 22796 29 100.0 32 ............................. TCTGTCATTTACTCACCTATTATTCATTAAGA 22857 29 100.0 32 ............................. CCTCATCTATGCAGTACCAGATGCGTGAAATG 22918 29 100.0 32 ............................. CGTAAACATATTGAGGACGAATACCTTGATAT 22979 29 100.0 32 ............................. CTTGGTGAGACAATTGAAGGCGCAGAGCTTCA 23040 29 100.0 32 ............................. ACCTTTCACTCCATCATATTTTAATGATGTAT 23101 29 100.0 32 ............................. CCAGTAGAGCCAACCGATACTGCAAACTTGAA 23162 29 100.0 32 ............................. CGAGAAAACAACGGCCTATTTACAGGGTTGTC 23223 29 100.0 32 ............................. TAATACCAAAATTGTCCGATCGCGTGGCTGGT 23284 29 100.0 33 ............................. GTCCCGCTCGTACTGGTAAGACAGCGGCCTTAA 23346 29 100.0 32 ............................. GTCAGACGGACAGCCAAGAACTGATAAGGTGA 23407 29 100.0 32 ............................. CATGTCGTAATTTAAATTCATCTATGACTAAA 23468 29 100.0 32 ............................. AACATTAATGTTCATGGATGATTGTTTTGAAT 23529 29 100.0 32 ............................. GACTCATCACCATTAGAACAGGCTAGTGATGT 23590 29 100.0 32 ............................. TTCTTTAGTCGTTTTATTACTCAGTTCCATGA 23651 29 100.0 32 ............................. CACGTTGACGTACCGATATTCTGATCGCTAAA 23712 29 100.0 32 ............................. TTTTTAGGCATTTTCCATATGCAATTACCGTC 23773 29 100.0 32 ............................. GGAGTGCGGCAATACCGGGACCACCAAATTGA 23834 29 100.0 32 ............................. TTTTCAGGTGTAGTCCGGCTTTCTTCGATGTA 23895 29 100.0 32 ............................. GTTGATAAAGTTAAAATGACGACAAATGATCG 23956 29 100.0 32 ............................. ATTTAAAATAATTGAATTTAGTTGTTGCAATA 24017 29 100.0 32 ............................. TCGGAAAGAACAAAGCTAATTGAGGCTATGAA 24078 29 100.0 32 ............................. ATGTACGGAATAGAAAACAGAACGGGCGAAGA 24139 29 100.0 32 ............................. CTCCCCATCCTCGTCAGTAGCAAGGCTGCTAT 24200 29 100.0 32 ............................. TAGTTACGGGCATACAACATAGCCAGAGTCAT 24261 29 100.0 32 ............................. TGTAGTATTCAAGACGCGTACAGCGCTGTACT 24322 29 100.0 32 ............................. CCGTAACCGTCGGTACGTGCTGGCGTTGCTGT 24383 29 100.0 32 ............................. CTATCAAAATAAAAATCGCTAATTTATAATAA 24444 29 100.0 32 ............................. TAACGCCACATTAGTCAAATAGCTGACTGGAA 24505 29 100.0 33 ............................. CAGGTAACTCTTGAAGAGCATTGTTTGCGTTAT 24567 29 100.0 32 ............................. GTTTACTGCATAAGTACAAAAGCATCCCACGA 24628 29 100.0 32 ............................. AACCTGCAAGAGTTGACGACTCAAATAGCTAG 24689 29 100.0 32 ............................. TCAATTGCCGTGGGTGATATTGGCTTATTAGA 24750 29 100.0 32 ............................. TCGGTGACACGATTGAATCTATTGCTGCAAAA 24811 29 100.0 32 ............................. GGGTTAAAGGTTCAAAATTCACTGTTGAAAAC 24872 29 100.0 32 ............................. ATGTTTTTATCACGGATTATGAGACTATGCTG 24933 29 100.0 32 ............................. CTTTACAGAGTGATAAAGAGTTACGAGGATAA 24994 29 100.0 33 ............................. GTCATGCGGTGATAATCGAATAGAATGCAGTGC 25056 29 100.0 32 ............................. GATTTGCTGGCGAGCAAAACACAGCTTATAAA 25117 29 100.0 32 ............................. CATTGGCAGCATCACCTTGCCCGTTTGTATGT 25178 29 100.0 32 ............................. TTATTCATGACATTTGCATCAGAGAAAATGAT 25239 29 100.0 32 ............................. CTATGTAGTTAAACGCCCACTCATTCATAAGT 25300 29 100.0 32 ............................. GCATTAAAAACGCCAGGTATCGCCCACTATAT 25361 29 100.0 32 ............................. TAATAGGCCACACTCCATTGATGTGCGACCCA 25422 29 100.0 32 ............................. TACCAGTAAACCATCAATCTGATATTTATCGT 25483 29 100.0 32 ............................. CCGTTACGATACAACGGTCGCGATTATAAAAC 25544 29 100.0 32 ............................. CTCCGTGCTATTGCTGGTTATAACACCCCTAA 25605 29 100.0 32 ............................. GTTTCAATTGTGGATAATCAACCATTCGTTGA 25666 29 96.6 32 ............................A CGCGCGCAACAGAAGAACTTGGCGAGCTTGAA 25727 29 100.0 32 ............................. AATAGACGGTATAACGCTTACCCTGGCGTATA 25788 29 100.0 34 ............................. TGCGAACATAACCTGTTTGAACTGCAGGAAATAC 25851 29 100.0 32 ............................. CAAATCGTTCCATGAACTCTTTTTCTTCAAGC 25912 29 100.0 32 ............................. TGGATTGCCAGATGATATTTGCAATTTCCTAA 25973 29 96.6 32 ............................T TAAATAATTGTGATAATTTGATATCATCAAAC 26034 29 100.0 32 ............................. TGTCTTATGTTATGCCAAAAATATGGCATTCG 26095 29 100.0 32 ............................. GGATTTTATACTCTTCTATGATTCCGATTTAT 26156 29 79.3 32 ..........T.TTT........G....C TTACCAGGAATCAGCTTGATTGAGGCTTCAGT 26217 29 79.3 32 ..........TG..TA.......G....T ATGCAAATAAAACTTCTATCCAAATCGGCTGG 26278 29 89.7 32 ..........T.T...............T CATGACTTTATAAACAGGATAAAATTCATCAT 26339 29 75.9 32 ........T.TCTT.A.......G..... CAAAAAGCGTAACAAATAAAAGCGAGGCGGAA 26400 29 72.4 0 .C......TTT.T..A...........TA | ========== ====== ====== ====== ============================= ================================== ================== 72 29 98.5 32 GTGTTCCCCGCACCCTCGGGGATAAACCG # Left flank : CACTTATCGATGAAGTACTCAGTGCGGGAGATATTACAGCTCCTGAACCTTATATAGATGCGCAGCCTCCTGCTATACCAGAGCCAATTACGATTGGTGATAGTGGCCATAGGAGTAAATAGTTTATGAGTATGCTTGTTGTGGTTACTGAAGTGGTACCGCCTCGATTACGAGGACGTCTTGCAGTTTGGTTATTAGAAGTTAGGGCAGGTGTATATATAGGGAACGTTTCTCGAAAAATCAGAGAAATGATCTGGGAACACATTGAATGCCTTGCTGAAGATGGCAATGTTGTAATGGCGTGGGGAACCAATACCGAATCAGGTTTTGACTTCCAAACTTATGGCAAAAACCGTCGAGAGCCCGTTGATTTAGGCGGGTTACGTTTAGTGAAATTTTTACCTGCAGACATGATTACTGAATGAAAAAATGTTCTTTAAAAAGTTGGTAGATCTCCAATGGTAGTAATTTACCCTTAAAATCAATAGATTGTATTTAGA # Right flank : AACTAAATTTACCCATTAAATATCGGGGTTTTGATTAGATGTTTTAGGTTGAAGTCTTATAATTTTTTGTGTGTAAAAAGCACTCATAAAGTGTTGAACAAAATAAGAAGATAAATGGCTTTAAAGCTCAAATTTTATGAGAGCTTATACAAAATTAACATTCATAAATAACTAATATTAAATAACTTAATTTTGTTCTATTTCTTTTCTAATTCAATAGCGTGTTGGTTTAAGCCTTAAGTGTATTCTTTTACGTGAAAGTTAGAATACTTATTTGCAAGGTTGTTAAGTGCCCATTGAGCTGTAGGACTATGACGAATAAATATGAAATTATTTGAGACTATTTCTCTGAAACTCCCAGAGATAAACGATGTAAATTGCAAAATTCACTTGGCTGTATGGAACGGAAAAGATAATCCACTTGATGTTTTCTTAGCTGGAAAATTTGAAGAATGGCAACGCTGGCAATCTAAGCGTAACTTCGAAAGAGAGTTCATTGT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCCTCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACCAGCGGGGATAAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.50,-8.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-32] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //