Array 1 2945511-2948160 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAEKAW010000001.1 Klebsiella pneumoniae strain Q1448, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2945511 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 2945572 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 2945633 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 2945694 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 2945756 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 2945817 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 2945878 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 2945939 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 2946000 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 2946061 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 2946122 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 2946183 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 2946244 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 2946305 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 2946366 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 2946427 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 2946488 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 2946549 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 2946610 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 2946671 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 2946732 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 2946793 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 2946854 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 2946915 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 2946976 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 2947037 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 2947098 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 2947159 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 2947220 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 2947281 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 2947342 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 2947403 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 2947464 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 2947525 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 2947586 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 2947647 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 2947708 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 2947769 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 2947830 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 2947891 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 2947952 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 2948013 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 2948074 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 2948132 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATCCCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //