Array 1 106378-105990 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFOI01000014.1 Acinetobacter baumannii strain 4300STDY7045874, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 106377 28 100.0 32 ............................ TGATTGCGGTGATGAGACCATTTTGTATTCTC 106317 28 100.0 32 ............................ TGAATCGAACTTATCTAGGGCATGGCTTTATC 106257 28 100.0 32 ............................ TGAATCGAACTTATCTAGGGCATGGCTTTATC 106197 28 100.0 32 ............................ CTCCTCATCAAATAGGTCGGGCCAACTGGAAT 106137 28 100.0 32 ............................ TCCGCAAGCGTGGCTTCACTGTTAATTTTCGT 106077 28 100.0 32 ............................ AGTGGAAGAAGTCGGGCGAGATCATGATTTTG 106017 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 100.0 32 GTTCGTCATCGCCCAAATGATTTAGAAA # Left flank : GACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGGGATGAAGGAAAAAATTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAACTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTCGCTGATCTAGTTAAAGATGCTTTTGTAATGCCAATTGCTTTTACATGTGCAGCAAAAGGATTAAATCAGAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGCAGTAAAATCAAATAAAATCATACATTTAATCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTAAACTTAACTTT # Right flank : TCTGAATCTTAAAAAAATCCAAAAAATTATAGTTCAGGACTTTTCATTAATCTTGGTGGGCTTGATATCTCCCCTAATAGCCCATTGTAGAATCGATCTCTCTAATTAGGAGCGTGGTAAATGTTTTGACTTAGTAGGCCCATGCAAAAACTGCCCTTTCCGCAATGATAAGCTCGAACAAAAAGGCTGGTTAGGCTCTGCCCGTGCTCAGGATATTTTCGACAATTTAAAAGATGGTGGCTTCTTCCCTTGTCATAAAACCAATGATTATGTCCGGGATGAGAAAGACTATAGCGAATATGACGATGAATGTGAAAACGAACCAAAGTTTAAGATTCAGGGTCAACATCAGTTCTGTGCCGGTGCTTTAATTCTTATGGAGAAAACAGGTGCCGCAGACAGATCTCAGGTTATCCAAATTGCGGAACGATTAAGATTGTACAAGAAGGATAAACTAAGAATTGCCACCTCCTCTGTTTTCAATTCAGAGCTTGAGTTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAAATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [71.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 111466-114615 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFOI01000014.1 Acinetobacter baumannii strain 4300STDY7045874, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 111466 28 100.0 32 ............................ CGAGTTCGCAAAGGTCCTTCATGAGAACTTTC 111526 28 100.0 32 ............................ GTGCCTTGAATGCCGTTCACTTCACGGTTTGA 111586 28 100.0 32 ............................ AGCGTCGTTCGGTTACTTACATGAACGACCGT 111646 28 100.0 32 ............................ GAGACGAAAAGAATCATGCAATTAATCGCTGG 111706 28 100.0 32 ............................ ACTTTCCAGAACTCGAAAATTTCACATATATC 111766 28 100.0 32 ............................ TGATTCTGGAAATGCTGCAAAGGTTTTGAAAA 111826 28 100.0 32 ............................ AGAGCAGTTTATTCGTGAGTTTGGTGTAGACG 111886 28 100.0 32 ............................ AGGATGATTTGATCTGCGTCTTGTTCAATCTG 111946 28 100.0 32 ............................ TTGTAATTGAGAGTAGCTAACAAAATCAGACT 112006 28 100.0 32 ............................ TTGTGCAAAACAGACAAACATTTGTAAGCGCA 112066 28 100.0 32 ............................ TGAGAAGATTAAACACAGCAATGTGATGATCG 112126 28 100.0 32 ............................ AATCTGTTGACCTTGAAAAACTGCAATATATT 112186 28 100.0 32 ............................ ATTGTGGTGTAGCAGGTTGGATTCGAACCAAC 112246 28 100.0 32 ............................ AATAGTAGATATATTGCTTAATGATACATCGC 112306 28 100.0 32 ............................ ATAACCTAAAGGCTCGAAGGGGCGGTCTGCAA 112366 28 100.0 32 ............................ AACCATCACGACACGGGCATTACCTGCTGCCC 112426 28 100.0 32 ............................ TCAGCTCCCCATTCGCTTTCACCCAACTTAAT 112486 28 100.0 32 ............................ TTATCCTTTTAAGATGCTTTGCGAAAAATACT 112546 28 100.0 32 ............................ GCATAGTTTTGCGCCCCGCACACAACAAAACC 112606 28 100.0 32 ............................ TCAAAATGAAGATGAACAGGCCAAGGCGATTG 112666 28 100.0 32 ............................ TGGATACTGTGATGAAACAAGAGAAGCCTACC 112726 28 100.0 32 ............................ TTGCAAATCTGGTACGACTCATTGGCAAAGTT 112786 28 100.0 32 ............................ AAGAAAAGAATTTCATGTTTGAAATGACGGCA 112846 28 100.0 32 ............................ AAGAATCGCACCTAGTGCCACATTAATTAAAT 112906 28 100.0 32 ............................ TAAGTATTTTGGAGAGTAGGCCAATGGGTTAG 112966 28 100.0 32 ............................ AGAGCAGTTTATTCGTGAGTTTGGGGTGGAGA 113026 28 100.0 32 ............................ TTTGATAAGAAGCAAAACTTTTAGTCTTTCCA 113086 28 100.0 32 ............................ TTCAAAATCACTTAAATGTTGCTCTGGAATGA 113146 28 100.0 33 ............................ AAATTGCGCCCATTTCAGCAAACATGTAACCCT 113207 28 100.0 32 ............................ CTCTTCAAAATACCACCCAACCCCGTGCGACT 113267 28 100.0 32 ............................ TTTCTGCATCCACACAACAAACATAAAGACTA 113327 28 100.0 32 ............................ TGATTGGTGTATTGAAGCAAGCGACTAGTTAA 113387 28 100.0 32 ............................ TGTAGTCTCAATCTTGAACCGCTGGCACACAC 113447 28 100.0 32 ............................ ATAGAAGAATCGGCAAGCGTATTCATAAACTC 113507 28 100.0 32 ............................ ATTATTGGTCAAAGATTGACTTAATATAATCA 113567 28 100.0 32 ............................ ATAGTAGTAATCGTTTTCAATGTGCTTGCGGA 113627 28 100.0 32 ............................ ATGAGTGAGTTTAAAGTCGGGGATAAGGTTGT 113687 28 100.0 32 ............................ TTAGCTCACATAATGAAAATTTGTCACTTTGA 113747 28 100.0 33 ............................ TTGGCCGTGAGTTCCCGACCGCGATTGGCGACA 113808 28 100.0 32 ............................ AACGTCGTTCGGTTACTTACATGAACGACCGC 113868 28 100.0 32 ............................ AGAAGCGCGTTAACATTCTTATGGAGGAGTTT 113928 28 100.0 32 ............................ CGCTGATTTAGATAAGAACGGGAATGTTCTTA 113988 28 100.0 32 ............................ ACACCGACACGCGTTTGAGCTAGCGTAACATC 114048 28 100.0 32 ............................ TTATATCGCTAAGATGCTTAACCAGCCACAAA 114108 28 100.0 32 ............................ TGCGCGAAATGGTGCGAAATGGCGGCATGTTT 114168 28 100.0 32 ............................ GGTTGTACAGGTCAATGGTGCAACGCCCGTTC 114228 28 100.0 32 ............................ ATTCAGTAGGGAAAGCTTCGCCGTATGGATTC 114288 28 100.0 32 ............................ AGACGCTACACGATCCTTATCTAAAGCCAATT 114348 28 100.0 32 ............................ TAGCGGAAAAAGTCTATGAGATCATGAAGGCC 114408 28 100.0 32 ............................ ATGAAGTGTTTAATTGGTACTGTGGCGAACCT 114468 28 100.0 32 ............................ CTTATGTCTCTCAATGGTGGTATTGATGATGT 114528 28 100.0 32 ............................ GAACCAAGATCAATCGTAGTGTTCGGGTTAAT 114588 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 53 28 99.9 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : CTTTAAAAATAGAGGCCGTTTTACCTGCATTTGCCTGATAATCAGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTAAGATAAGGTAAATCAAGTGCTTGTTGCTTACTTAATCGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGCACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGGAAAATGAAAGTATTGAAGGAGAGAGTTGCAACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTCAGAAGATTAGGTTATATTTTTTAAAAATGGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : AGTTTCTTCCAAAATTTAAGACGATGTATTTTGTCGTTAAAAGGTCGTATTAAACTGATTAAAGCTAGAGGTGGTCCCACTTGTTTGAACAACTAAAAGCGTATTTATAAGTGATATTCCGCTCTAGTTAAGCCACCTTGTTTTGTTGGGGTAGCTGATCATAGTAAAACTCATTTGGTGTCATTTTGTCTAGACTCGAATGAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //