Array 1 1927-189 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYZZ01000017.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1926 29 100.0 37 ............................. TTGTTCTGGTGGGCATAAAGCAGGGTATTGATTCTTT 1860 29 100.0 36 ............................. GTTTCACAGTCACGTGTATCGTACTGTGACTCAAAA 1795 29 100.0 37 ............................. TTAAATTGTTTTAACTTAAATCTTTTATTCATTTAAA 1729 29 100.0 37 ............................. TGCATTTCGTTTTGTACAGTTTCCATGCTTATACAAC 1663 29 100.0 37 ............................. ACTATTGTGCAAGAATTAATTTCTTTGTTTTCTATCA 1597 29 100.0 37 ............................. TTTTAGAACCTTCATTTAACTTTTTAACAATTGCAAC 1531 29 100.0 37 ............................. CATACTGGGCATATCTGTTTTTGCATTTTGTTTAATA 1465 29 100.0 37 ............................. AAGTTTGCAATAGCTGAAAATGTAAGAAATTTAATAA 1399 29 100.0 36 ............................. TTTAATTGGAAACTCTGGAGATGTGGTGCCTTTATC 1334 29 100.0 37 ............................. TAAATTCCATAGATAGCTTGCCCACTAACTTTATAAC 1268 29 100.0 37 ............................. ATAGATAGAATTGATTTATTGCTGAAAGGAGGTGAGA 1202 29 100.0 37 ............................. TATAGTATAAAACTAAAAGGTGATGAGATAGATAAGA 1136 29 100.0 37 ............................. ATAATGAACTTACACCATTCATATCTAGCTTCTTCAT 1070 29 100.0 36 ............................. GAAGTTGAAATAATAGGTTATACTACTGCCCATATG 1005 29 100.0 37 ............................. TGAGTTTGGTTATAAGTATTAATCTAGTTTAACTTCA 939 29 100.0 37 ............................. TTAAATAGTAGCAATTCTTTTTGTGTGAATTTGTCTT 873 29 100.0 37 ............................. TTAAATTTGAGGTTTTCGTTTGATACTCGTTTTAAAA 807 29 100.0 36 ............................. GGGAAAGTAACAGACAACTTAGTAAAATTAACAAAA 742 29 100.0 37 ............................. TTAATCATATCGTTTTGTTTAATTTCTTTATTTTTAA 676 29 100.0 37 ............................. AGTCAAAAGACCGACGAACAGACCCCATTGTAGTCCG 610 29 100.0 36 ............................. GAACTTCAACTGGAATTTCTAAACGAACATTAGGAG 545 29 100.0 37 ............................. AACCAAACAGAATGAAACTATAGATAGTTTCTTTCAA 479 29 100.0 37 ............................. GTGTTGAGTAAAAAATTCTAACCATTTGACTCTATGT 413 29 100.0 36 ............................. CATGGTACTTCTTCTCTTCCTGTAATTCCTAATATT 348 29 100.0 37 ............................. ATTTTCTTAACAGAACATGCTCATTTTGGATTGGTTA 282 29 100.0 36 ............................. AATTATAGAAGAAGGTATCGCAAAGGGGAATTATGA 217 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 27 29 100.0 37 CTTTTATATTAACTATGTGATATGTAAAT # Left flank : AGGAGATGATATATATAAACCATTAAAGGCTTGGTGGTGATAATTTATGTTTGTTATATTGACATATGATATAGAAGAAAAGAGAATTAATAGAGTTAGAAAAGTACTTAAAAAATATTTAGTTTGGACTCAAAATTCTGTTTTTGAGGGAGAAATAACAGAAGGAAAGCTACATAAATGCCTTTCTGATGTTAATAAATTAATTGATAAGAAGTTTGATTCAGTATATGTTTATAGAGTAAAAAATTGTAAAAATATAAAAAAGGATGTAGTTGGAATAGAAAAGAGTTTTAATGAATTATTTTTATAATTATTTTTGCATTAAACCTAAATTTAAATTAATTAAGGTTAAACTATTGAAATTACTAGGTTTATCCACAATAAAAAATAAATATTAAAAACGCTACTGAAGGTTTACTGCAAAATGTGGAAGATATTATAAACTAAGCATTGATATAAATCCAGTAATATCAGTGCTTACAGACTTTTGAAATTTTAGG # Right flank : TTTAAATAAAGGGCTTACTTATACAGAGTTAGGAATTACTTTCTCTTAAGCCCCTAAAAACACTTGGACAATTGCTTATGCATTAGATATAATGAAGAAAAGTAATTGGAGGTAACTTGTGAGAGGTAGAAGTTATACAAAAGAATTAAAAGAATCAATACTAAATGAGGTTAAAGAAGTAGGCAATGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 17907-18134 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYZZ01000016.1 Clostridium rectalis strain Marseille-P4200, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 17907 31 100.0 34 ............................... TAACGAAAAATGGGAATGTAGGTGCGATTGTGGG 17972 31 100.0 36 ............................... AGTCAAAAGACCGATGAACAGACCCCATTGTAGTCC 18039 31 96.8 34 ..................T............ CAAAGATATGGAACAAATATAAATACTTTAAAAA 18104 31 93.5 0 ............................GG. | ========== ====== ====== ====== =============================== ==================================== ================== 4 31 97.6 35 GGTTGAACATTAACATAAGATGTATTTAAAT # Left flank : AGCCCTAGACAAATCCACCCAAACACTCATATATGAATGCTATATTTAAAAGAAAAGTATTATTTAAAACCTACATATTTTCAAGTTAAAACTTGCAATGCTACGGGTTTACCTGATGACTACTATCTTTAATATTCCCATCTTTTTTAGTGCCGGTAAAGATTTAGTACGTCATAAAATAAGGATTTCTAAAATTTAAATGAAAGCTACTAAAAAAAGAGAACTTTTAAGAAAGTTATTATAAAATTAATGGGAGTAAAACTTTCCTTAAAATTCAGGGATATGTTTATGGCAATGTTAGTATAAAAAATATCTAAATTATATTTTCCAAGTAAATCAAAATTATAAACCTATCCTAGCTATTGAAATACAAGGCTTAGGGTAGGGTTTTGTTTTTAGCTTTTTTAAAAAATGAAATCACTTGGAAAACTTTTAGTGAAACCTTGAAATATCAATGGTTAGATGATACCCTTAATATTAAGGAATGCCTATTTTATGAT # Right flank : TAGGGAAACAAAATCTATGATTTTTATAAGAACTACACTGATTTAAATAGAAGCAGAAGGAGTTAGGGATGAAGTTTAAAATAATATTTTTCTAGTGAATCAAATTTTATGATATTTTCAGGTATTATAGGAGGCGCAATAATGGGGTGCATGTGTGCTTTTATAGGATTTTCAATGGCAAATAATAAAAGAAATTAATAAGCTTTAGTAGCTGTTTTATCCATTATCATTTTAAATTTATCATAATTAACTGTCCATCCAACAGTTCTGTATGTTATTTTTGATTTAGAGGGTATACTTTGAGGTAAAGTATCAATATTTAAACCATTTAAAGCAACTTCTGGTTTTGCTGCTGCTCTAACAGATATATAACAAAAGAGGATTGGTAATGAATTTTTAGCTCAAGCAGTACCTCAAATGTTGCCATGGCGTGAAAATGGATATTATTTCATAATTAATAAAGAAGTAAATGATTTTTTAAAGGAACCAATAAAACCAAT # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //