Array 1 19079-15813 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNTS010000018.1 Lactobacillus delbrueckii subsp. lactis strain NCIMB 8140 NCIMB8140-i1-1_scf18, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 19078 28 100.0 33 ............................ CTCAGTAACCATTGAGTTCTCAAGCGTGGTTGA 19017 28 100.0 33 ............................ CGTCGCCCTTGCGAGTGAGACCTACTGCAACCA 18956 28 100.0 33 ............................ TGGTGACCATCTTGTTGTGTTCACGAACAACGT 18895 28 100.0 33 ............................ GCTTAGACCAGGTGGCCCAAAATTCCTTCTCTG 18834 28 100.0 33 ............................ CCATCGCTAGGATAGATGGCTGTGCCGCCGCCA 18773 28 100.0 33 ............................ TGGAAATTGGACTGATTCCGGAGTTTACCAATT 18712 28 100.0 33 ............................ TTGCGGCGGCTTGAGTTGGTTATTCGCGATTTG 18651 28 100.0 33 ............................ TTTTTTGTGCTTGATCCGGAACACAACTTTAAA 18590 28 100.0 33 ............................ TTCAAAGACCAGTGGGACAACGAATTGAATGAG 18529 28 100.0 33 ............................ TCTTGGCTCTCCATTTTCCGTTTCGCTTTTCGA 18468 28 100.0 33 ............................ CCAGCTTGAGCTTTTAAATAAACAGCTGGGAAC 18407 28 100.0 33 ............................ TTTGCTTGGTCAGCCCTTCGTTAAGCCGTGAGC 18346 28 100.0 33 ............................ TACAATTGCAATTAGAAAGCTAACGCCTAGAGA 18285 28 100.0 33 ............................ CATTACCGTCTACGCCCAGCCCCTTCCAGTTTG 18224 28 100.0 33 ............................ CGCCTGGATCGAATGGGAGGTGCACAAGGTTGG 18163 28 100.0 33 ............................ TCGAACCGCTGCCACCTCCCGCTTGGCTTGCGT 18102 28 100.0 33 ............................ CGCTGAAGCTTGCCGTCTGCTGGCTGTTAAGTG 18041 28 100.0 33 ............................ CGAAGAATCCGCGCATATCGCTGAGCTTTTGCT 17980 28 100.0 33 ............................ TGGTGTTATTACCCAGCTGTATACTGACAGTGC 17919 28 100.0 35 ............................ TAGATGGCATTAGCGTGATAATCGCCTGCCCGTGT 17856 28 100.0 34 ............................ TTCAGCATGCGGTGCCTCAACCCACGGCCTGGGA 17794 28 100.0 33 ............................ TATAATTTTTTCGCTCTTTTGCGCTACTCATTT 17733 28 100.0 34 ............................ TCATTTGTATATGTGTAAAGCGTGTTTTGTCCTA 17671 28 100.0 33 ............................ TACACGCAGGACCGGGGGGAAGCACTCAAAAAC 17610 28 100.0 33 ............................ TGTTGTTTGCAAGCGAATTTGTCTTGCTTTCAA 17549 28 96.4 33 ......................G..... CGGTATTTCCGTAACTCGCCATGTATACCTCCT 17488 28 100.0 33 ............................ TTTCTGTCAAAATTGCGCTTGCCCTTGAAGTTA 17427 28 100.0 33 ............................ TTTCTGTCAAAATTGCGCTTGCCCTTGAAGTTA 17366 28 100.0 33 ............................ TTTAATTGCTAGTGCTACCGACATGCAAGACTA 17305 28 100.0 33 ............................ TCATAGTGACGGCCAAAGACATAGCCGAAAACA 17244 28 100.0 34 ............................ TTTATGTATCAACATGTCCCCACTTCTGTGGGGG 17182 28 100.0 33 ............................ TTTGGGTTTCCTGGCTCCGTTTAAGTACTACGG 17121 28 100.0 33 ............................ TATAACGTATCGAGTAAGGCCAACTAGCCAAGT 17060 28 100.0 33 ............................ GTGAAATTAGGCGCTGGCCGCCTTTTGCCGTAA 16999 28 100.0 33 ............................ CATGATCAAATAAGCAGCAGCAGCAAACACTTA 16938 28 100.0 33 ............................ TCCATTGTTTAGCAGCTGCTGCTTAAGTAATTG 16877 28 100.0 34 ............................ TATTTTCACGGAATTTTTTAGATGTAGTTTTTAA 16815 28 100.0 33 ............................ TCTTCATCACTGGCCATCAAGACCAGGGACTCA 16754 28 100.0 33 ............................ TGACCCGTCGTCGTTTACCAAAGTGTCCAAGGT 16693 28 100.0 33 ............................ TAGGTGACCTGTTCGCCCTCGTGATTTTTGTAG 16632 28 100.0 33 ............................ CCCTTGCTGTCGTAATCCATAAAGTCACGGCGG 16571 28 100.0 33 ............................ TTTGCGGACAAGCTCCAAACTGACATTTATACC 16510 28 100.0 33 ............................ CAGTCACGTGGAGGCCTTAATCAAAGCTTCCAA 16449 28 100.0 33 ............................ CAGAAAAAATTTGCTGATGAGTATATCCGGCTC 16388 28 100.0 33 ............................ TCATTATTTAGTGCTACTTGGTCTTTGCCTGTT 16327 28 100.0 33 ............................ CAAAGCGGTTTATCTTAAAGCTGGCCGACGAAG 16266 28 100.0 33 ............................ TGACCCTTGCGCTTGATTCAATGAATTAATGTT 16205 28 100.0 33 ............................ TCAGTCCCGTGGCAATCAAGTCCAGTCCTACGA 16144 28 100.0 33 ............................ CGCCATGCACCTCGCCAACTCACAGCAAGCAGT 16083 28 100.0 33 ............................ TTTTTTCGTAGCTCAGACCGATTGCCTTAGCAA 16022 28 100.0 33 ............................ CGTGATTATTGGTGAACGGTCAAACGGGAAAAC 15961 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 15900 28 92.9 31 ......................CA.... GTTCTTTATGCTATTGTGTTTTTCGTACTGT 15841 28 78.6 0 ...........AT.T.C....A.....A | T [15834] ========== ====== ====== ====== ============================ =================================== ================== 54 28 99.4 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGACTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTGGATAAGGAAGGCGTTCCACTGCAAGAGGTTTTGGGAGAACTAACTGACTTTGTTAGGGATGTGCCAATTGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : TAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGGTAATAGGGAAGGAGTGAGGAACAAGCGTGAGCATTTACGGAAAGTATGCCGACTATCTTCTACAAATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACAGGCAAAAGCTATATGGGTACCTGGAAGGTCGCATCAAAGGAGAAGAAAGCATGACGCAAAAGTGCGAGAGAAAAGGTTTGCCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGGTCATACCACTTGATCATGGAAGTAGTCACTCCCTTTGAAGACGTCCACGGCAATAAGCCTGGCACCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //