Array 1 1-1523 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLJG01000129.1 Acinetobacter baumannii strain ABOBEN contig-2000037, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 61 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 121 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 181 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 241 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 301 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 361 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 421 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 481 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 541 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 601 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 661 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 721 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 781 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 841 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 901 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 961 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 1021 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 1081 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 1141 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 1201 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 1261 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 1321 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 1376 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 1436 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 1497 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 26 28 97.8 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : | # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 23623-22754 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLJG01000354.1 Acinetobacter baumannii strain ABOBEN contig-59, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 23622 29 96.6 31 ............................T AAAAATAGTGTGTTAATTATTTATGATGAAA 23562 29 96.6 31 ............................C GTATACATGCACATCAATACGATATCCCGAT 23502 29 100.0 31 ............................. TACTATTATAATGATCTAAACCCATTACAAC 23442 29 96.6 31 ............................T GCAGCTACTCGACATGTTGGTAGGGCAGATG 23382 29 96.6 31 ............................C AGTCGGCTGGTGCTAATTGAATAAAATCGTT 23322 29 100.0 31 ............................. GATTGAGGCGATTTTTATCGCGGACATTGCC 23262 29 96.6 31 ............................C AGTCCCCGCTTTGAAGCATTCCCATCAGTAC 23202 29 96.6 31 ............................T CACAGCTATCGTCTGGCTGCCGTCGCGTAGA 23142 29 93.1 31 A...........................T TATTATTAAACGGGAAAAGTATATTCTTGCT 23082 29 100.0 31 ............................. TACTATTATAATGATCTAAACCCATTACAAC 23022 29 100.0 31 ............................. TCATCAATAAGTTGGCCTTGATTTAAATAGT 22962 29 100.0 31 ............................. GATACAAACGAGTTCGCATCTCGACCAGAAG 22902 29 100.0 31 ............................. TTATCCAGATAAAACCATATCTACAAAGTGG 22842 29 96.6 31 ............................T CAACCTGAACACAGACATACATGTTCTATTG 22782 29 82.8 0 ...GC...................AT..T | ========== ====== ====== ====== ============================= =============================== ================== 15 29 96.8 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : | # Right flank : TTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5313-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLJG01000257.1 Acinetobacter baumannii strain ABOBEN contig-4000003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 5312 28 100.0 32 ............................ TTCTTCTCTCTGATTACAAGCTCCCTGGGGCA 5252 28 100.0 32 ............................ ATAAGGACGATGCAAGTGATAGTGCTCACCGA 5192 28 100.0 32 ............................ ATGCAGATAAAACAGTAAAACTCTATGAAAGC 5132 28 100.0 32 ............................ ACTGGTTAATTTTAATAATGCGGATGGATATT 5072 28 100.0 32 ............................ TCTTAATCTCTTCAATGTTCATCTTCAACCCT 5012 28 100.0 32 ............................ AAAACGTTGAACATTAGTAAGTGTTAGAACAC 4952 28 100.0 32 ............................ TTACGATGGCCAACAGAAATATTAGACATATA 4892 28 100.0 32 ............................ GATAAAGGTTGTATGCGCTCTAAAGCGTTAGT 4832 28 100.0 32 ............................ AATCCAAACAGCAAAACCGATGATACCTGCAA 4772 28 100.0 32 ............................ AGTGGGCTTATATCTCTTCTATAAAAAACGGA 4712 28 100.0 32 ............................ AATGCTGCTGTTGACGTGGCTGGTCCAGTTGC 4652 28 100.0 32 ............................ GGAGTCAGGCACACTATTAGATAGCAGTGTGC 4592 28 100.0 32 ............................ ATGATGAACCTGTCTTACCTTCAGATCCTTCT 4532 28 100.0 32 ............................ AAGCATTTCAGTTGCACCAAGATGAATACTTT 4472 28 100.0 32 ............................ TCAAGTGCAGATGCAGCCTAATTATTCTTCTT 4412 28 100.0 32 ............................ AAGAACGTTTGGCAGCAAAAGGAACATTACCA 4352 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 4292 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 4232 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 4172 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 4112 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 4052 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 3992 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 3932 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 3872 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 3812 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 3752 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 3692 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 3632 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 3572 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 3512 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 3452 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 3392 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 3330 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 3270 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 3210 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 3150 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 3090 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 3030 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 2970 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 2910 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 2850 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 2790 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 2730 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 2670 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 2610 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 2550 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 2490 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 2430 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 2370 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 2310 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 2250 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 2190 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 2130 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 2070 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 2010 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 1950 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 1890 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 1830 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 1770 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 1710 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 1650 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 1590 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 1530 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 1470 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 1410 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 1350 28 89.3 32 ....T.......AT.............. TTAAAATAAATGCCTGTGGTTTTTTCTTAACT 1290 28 89.3 32 ....T.......AT.............. AGTTTCCGAAGTTGAATTACACTCGCCAAGTT 1230 28 89.3 32 ....T.......AT.............. TAACACAGTGATTTGATTACCTTGAGCAACCC 1170 28 89.3 32 ....T.......AT.............. ATCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 1110 28 89.3 32 ....T.......AT.............. TCATCCACCTTTGATGAAACGGATCCACGCAA 1050 28 89.3 32 ....T.......AT.............. TCTTGTGTGACGGCCTCCACTCCAGATCCCGC 990 28 89.3 32 ....T.......AT.............. TTAAGCTTCAAAAATAGCCATTGATTATAAAA 930 28 89.3 32 ....T.......AT.............. TGACAACTTTCCACGGCAATCAGGGCTTTCCA 870 28 89.3 32 ....T.......AT.............. TAAAGATGCACGTGGCCTAATGCAAGTTATTC 810 28 89.3 32 ....T.......AT.............. TTTAAAATTAGGTGCTGAGTTACCACGGCTCA 750 28 89.3 32 ....T.......AT.............. TAAACCAAGAACTTGAAGATTTTGATGCTTAT 690 28 89.3 32 ....T.......AT.............. TAAAAATAGTGTGTTAATTATTTATGATGAAA 630 28 89.3 32 ....T.......AT.............. CGTATACATGCACATCAATACGATATCCCGAT 570 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 510 28 89.3 32 ....T.......AT.............. TGCAGCTACTCGACATGTTGGTAGGGCAGATG 450 28 89.3 32 ....T.......AT.............. CAGTCGGCTGGTGCTAATTGAATAAAATCGTT 390 28 89.3 32 ....T.......AT.............. AGATTGAGGCGATTTTTATCGCGGACATTGCC 330 28 89.3 32 ....T.......AT.............. CAGTCCCCGCTTTGAAGCATTCCCATCAGTAC 270 28 89.3 32 ....T.......AT.............. TCACAGCTATCGTCTGGCTGCCGTCGCGTAGA 210 28 85.7 32 A...T.......AT.............. TTATTATTAAACGGGAAAAGTATATTCTTGCT 150 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 90 28 89.3 32 ....T.......AT.............. ATCATCAATAAGTTGGCCTTGATTTAAATAGT 30 28 89.3 0 ....T.......AT.............. | ========== ====== ====== ====== ============================ ================================== ================== 89 28 95.3 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : AAG # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //