Array 1 127-1758 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMQA010000020.1 Weizmannia coagulans strain BA375 NODE_20_length_54844_cov_298.482373, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 127 30 100.0 37 .............................. TTATTAGATGGATTTGCTTCCGATTCGTCGATTTGGA 194 30 100.0 36 .............................. TAGTGTTTATATCTGTGAATCCATGTTGGACAGCAA 260 30 100.0 39 .............................. CGAGATAAACGGGCGGCGCTGGCGGCTTTTGAGTTGGTA 329 30 100.0 36 .............................. ATTCGGTCTATGGTATGGCTGTGACCGACATAACCC 395 30 100.0 38 .............................. TCGGTAAGATCATCATCCCGACCCGTGGTATCTTTCTT 463 30 100.0 36 .............................. ATTTTCGCAGGACGTACTAAGCGAGCCAGAACTTCC 529 30 100.0 36 .............................. AAGCGTCATTTTCGGTTCGCATGCTTCCGCCAATTA 595 30 100.0 36 .............................. ATAATTTCATAGTCAACATTTGTTATTGTTGTTGCT 661 30 100.0 35 .............................. ATCGGTGTACCTGCGATCAAACCGGCGATATACGG 726 30 100.0 39 .............................. AGCCGAATGCGTTCGAATCCGTACGCTTCTGGGTCATCC 795 30 100.0 37 .............................. ACGCTCGCGTAATTCAGTTTCAATTCGTATTCTTTTC 862 30 100.0 36 .............................. GATTGGGTACTAGCGCAATATTCAACAGCAACCGTC 928 30 100.0 37 .............................. TCCGAAGTCAATCATATCATACAGAAACGGGCTTAAG 995 30 100.0 38 .............................. TACGGACTTAGCACTTCCATTTTCCCTTTCCCTTCCGT 1063 30 100.0 36 .............................. ATAATTTCATATAACCTCAACACTCATCTTCAACAG 1129 30 100.0 38 .............................. CCACATGATAAGTCGAAAGTGACAAGTCGCCAACAACC 1197 30 100.0 38 .............................. CGATATAGCGGTAGTGATTTCGGATGCTACTTCCTTCA 1265 30 96.7 38 .............T................ TCGAGATGTAAGGCAATATATGACAGAAATCGAAAAAT 1333 30 100.0 36 .............................. CCTATATACAATAGCTTATCGCATTTTTTACACCTA 1399 30 100.0 36 .............................. AACGGATAGGCTTCAAAGCCTTCACGTGCTTCCGTG 1465 30 100.0 36 .............................. TGCCTCCGGCGTTACAGCCGGCGCAAATGGAACGAT 1531 30 100.0 36 .............................. CTGGCATCGTCGTCTGATACATCAAAGCGCCCGTAC 1597 30 100.0 37 .............................. TGATACAATAACGAACGTGTCCGCGGTCGGCGACGCC 1664 30 100.0 35 .............................. ATCTCACACCGGTTAAATAAAAAAGAGCAGGCCAA 1729 30 96.7 0 .............................A | ========== ====== ====== ====== ============================== ======================================= ================== 25 30 99.7 37 GTTAGTATTTTACCTATGAGGAATTGAAAC # Left flank : GTAACAGCCTCCAAGTGCAAGGTTTTTTACGTGTTTCCTTTGAAATCCTTACACTTTATATTCGACAAAAGTAGCCAAAATCCTTGTCAAATCTGGAATTTTTGCTTATTCAGCAAGCCCTAAATAG # Right flank : AACACTCAATATAGCCAGTCGGAAGTTAATTTCTATTCTGAAAATATGTGCCGCCTTGATTTTCATTCACCCGCTGGTGTCGCGTTCACTGCGGCACGGGCTTCTAATTGAATAAGAAATAAGTCACTTTCACAGTCTATTCCGCTGAATCAAATTTAATTCTGAAATCACGAACACACCTGTCATGCGAAACAAATTTTGCAATCATAAAACAGGAAAAATCATCTGAAAAATCGTAAACTATTACTCGAAGGGAGATGGAGCTATGGAAGACTATTTGATGTACTTGAATGGTGGATGGACGGGGGAAGGACTGCCAAAAATCAAAGTGGACAACCCTGCGTCCGGCGAAGTGATTGCGACGATTCCAAAAGGCGGGGAAAAAGAAGCTAAGCTCGCTGTTGACGCGGCGCATGCGGCTTTTCCGGCGTGGGCGGCGCTTTCTGCCTATGAACGAAGTGCCTACCTCCGCACGTGGTTTGAACTGATCCGTCAACATG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGTATTTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 51580-60102 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMQA010000009.1 Weizmannia coagulans strain BA375 NODE_9_length_97154_cov_308.365956, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 51580 30 100.0 35 .............................. AACCACTCTCTAACCTGCTCAACGGTGCGGTCCGG 51645 30 100.0 36 .............................. CCGATCGGGTGCAAGACGCGTAAGCCATCCCTGCCA 51711 30 100.0 37 .............................. TGGTATTGCCGGAGCGTATAGCGGCGGACAGCCGGCC 51778 30 100.0 36 .............................. AGGGGCCAGCCCCTTAACAATCCCGGCCGGGGACGC 51844 30 100.0 37 .............................. TAAAATTTGTTTCTCAATTCTCTATCCCCCTTATTTC 51911 30 100.0 36 .............................. CTTGTATAACAGTCGTTCCATATGCCTGTATTCCAC 51977 30 100.0 36 .............................. ATCAAAATACCACCATGGTAGAAAAAGATGGCCTGC 52043 30 100.0 37 .............................. CTTTCGGATGGAAAAGGAAAACATAAGCAAGAGCTTG 52110 30 100.0 36 .............................. ACCAAAGGAGAAAGCACCTCAATGGTGCGATTTTTC 52176 30 100.0 38 .............................. CTCGTCCAGGTGAGCATCATATACAATATAATGTATTC 52244 30 100.0 35 .............................. TGCACCGGGTTCAGAATGTTGCCGAAGCCCTTCAT 52309 30 100.0 35 .............................. ACATCCAGGATGGTCAAGACAGCCAGAAGCACCAA 52374 30 100.0 35 .............................. TTAAAATTCGTCAGCCATTGTCCGTCCATCCAAAC 52439 30 100.0 37 .............................. ACATCCAGGATGGTCAAGACAGCCAGAAGCACCAAAG 52506 30 100.0 35 .............................. TTTACATCTGCTGCACTTTATTTTTATTATGCCGA 52571 30 100.0 37 .............................. CTGGTTGTTGTCGTTATAGCTATTTCATATAACCTTT 52638 30 100.0 35 .............................. GAGGGGTACGTCGTAAATGATCAAATTCTAAATCC 52703 30 100.0 36 .............................. CCGTCTAAGGCGTTTTATATCCAGGATGTAAAGACA 52769 30 100.0 36 .............................. AACTCGGAAACAACATTTTCAAGTTGTTTTTTTGTG 52835 30 100.0 35 .............................. AAATGATGGAGCTAGACGGCACAAGCGCTTGGAAT 52900 30 100.0 37 .............................. CCCATATAATCCTCATTATATAGGCAAATCTTTTTTT 52967 30 100.0 38 .............................. GCGGAGGTGATCCGTCTAATGGCTGTACATAATCGATT 53035 30 100.0 35 .............................. AAGATGACTTCGCCGAATACATCCGGGAAGAATTG 53100 30 100.0 35 .............................. CAAAAAAAACAAAGGAGATGTTAAACATGCCAACA 53165 30 100.0 36 .............................. TAATCCGTATAAGGAGCGCCAAGAACGCGATTCGTT 53231 30 100.0 39 .............................. CATTTTATGCCGCGCGTGGTGTATAATAAAATTGTAAAG 53300 30 100.0 36 .............................. GGAAGTGCACGGATCTTATAAAGGCGAGCGGGTACG 53366 30 100.0 36 .............................. AGCCACTCATAAACTTTCCTTGTGCCAAGTGTAACC 53432 30 100.0 36 .............................. CAAAAAGAATAGCCGACTTGCTGGCGCTTATGAAGC 53498 30 100.0 37 .............................. AAGTGTATCGGAGGGGCGGCACTAAAAAACCGGCAGA 53565 30 100.0 37 .............................. ACGTGAATGAATGGCTAGAAGCGCATAAAGTCGGATC 53632 30 100.0 38 .............................. GTTGTATGGCTTTTTCGCGTGCCGGCCGGTGATCCGTT 53700 30 100.0 36 .............................. CTCTCCAGTTATGTTTCCGCAAATAAGCATTCTTGC 53766 30 100.0 38 .............................. GTCGCTGTTACCTCTGAAGAATTGAAATCCTGGTGACC 53834 30 100.0 37 .............................. CCTATATAATCCCCATTATATGGGCAAATCTTTTTTC 53901 30 100.0 37 .............................. CGGACTACGCCGGAAAAGATGGCACGGTCAAGAAAAC 53968 30 100.0 35 .............................. GATGATTCTGTAAGTGGCAATATCACGCAAGTCCA 54033 30 100.0 36 .............................. ATCAATATTATAATCTTGTGCTACAACCATATTGAC 54099 30 100.0 38 .............................. CATCATAAATGATTTCCGGTTGTTTCAGCCCTCGACGG 54167 30 100.0 39 .............................. ACTCTACATCAGATAAATAAGCGCTTAAATAAGCCCCGA 54236 30 100.0 36 .............................. TATTGCATATCCAACAATTTTTCTTGCCTGTTGTTC 54302 30 100.0 36 .............................. GTAACATGTTAGTCGCCTCTTATCTTGGAGAGGAAA 54368 30 100.0 36 .............................. TTTGCCCGCTGCTTCATGGTCGCTTGCTGCTCTTGA 54434 30 100.0 34 .............................. AAGTGAAAGGCAAAAACGAATAGACAGAAAGCGA 54498 30 100.0 38 .............................. AACAAAAAAATCACGATACTCCCCAAAAAGCCGAGTAT 54566 30 100.0 37 .............................. CCGGTTGTTTCCGCCTTGCTGTTTGTGGTCAGTTTGC 54633 30 100.0 36 .............................. AAGCCAACTAACTTTAGCTTTTTATCGAACCATTTT 54699 30 100.0 36 .............................. GCTTCCGTTCCGCGTATGTTGCTCCGTAATCTGAAA 54765 30 100.0 36 .............................. TTAAGTGCTTCAATCGATTGCCGCAGTGGATCAATC 54831 30 100.0 37 .............................. GTGCATGGGCCTTCTGTTATTCTTGTAGTGGCTTACC 54898 30 100.0 38 .............................. TAAAGAATCACCGGGCGAAACGGACGGAAAGGATAACC 54966 30 100.0 36 .............................. CCGCGATACGGCGCAGATAACGGCAAACCAGACAAG 55032 30 100.0 36 .............................. TAAGCTTTTTCTGTTCCTTCCCTTCCTCCAGCAGCG 55098 30 100.0 37 .............................. AAAACTCATCTGTTGAGCCATCAATAGGATCAATTAC 55165 30 100.0 36 .............................. ACGTTTTTGATTCCGTTTAAGCTGGCGAGCTTGCCG 55231 30 100.0 37 .............................. ACAATGCAATAGACGGCATGCCCACGTATGGGCTGGC 55298 30 100.0 36 .............................. TGCGCCAGTCTCGCGCGGAAATGGTCGCAGGCCGGC 55364 30 100.0 36 .............................. ACGAAACTGAAAAGCGGTGTCAAGCCAGCGCCAGCC 55430 30 100.0 37 .............................. GTATGCCAAACAGTCACAGGAAAGGATCAATTTTGCC 55497 30 100.0 36 .............................. ATGTTCTTGGTAGTATCATCGATAACTGTATCAAAC 55563 30 100.0 36 .............................. TCCCTTTCGATTTCCTGTATATATTCATGCCTGGCG 55629 30 100.0 37 .............................. CAGCTAGTTCTTCCGCTATTTCCGCGCTGCGCTTGAC 55696 30 100.0 37 .............................. ATGGAGGTAATAAAGGGACAACCTCACCGACGATCAT 55763 30 100.0 37 .............................. ACTTATGGACAAAAGAGACTTATAATAATTGCAAGAG 55830 30 100.0 37 .............................. ATGGTGTACTATATAAAAGGAATTAAAGACTTTGTCA 55897 30 100.0 37 .............................. CTGGTAAAGCCATTGACCAACAATTAGGGCACATAAG 55964 30 100.0 35 .............................. CGTGGAGAAGCCCCCCCGATAAGCTGGCCCGCAGG 56029 30 100.0 37 .............................. CCAAACGGTCAAAGCGTCTGGCGTGCAGGGCGTTGTC 56096 30 100.0 35 .............................. TAATTTCCCATACGCAAACATCGGTTAAGGCCAGC 56161 30 100.0 36 .............................. TTTGTATCGGTCATATCAACCGTTCCCGATCCGCTC 56227 30 100.0 37 .............................. TATAGTCAGCTTAAAGCGGATGGCTATGACGTGCCTT 56294 30 100.0 38 .............................. TGCACCACCTCACCACAACTAAATTCTTTTAAGCACCC 56362 30 100.0 37 .............................. CGCGTGTTTCATAAAATTCATGTAAGAAATAGTCATT 56429 30 100.0 37 .............................. CAGAAACTGCGATTGAAATATTAAGGCGGTGATGCCA 56496 30 100.0 37 .............................. ATATGTGTTGACAAAGAGTCTATATGTATGGTACACT 56563 30 96.7 36 ....T......................... AAAAAGACGTCCCTCTTCCCCAACCATTATGGCAGC 56629 30 100.0 36 .............................. TCCCAATCTTGCCAATGGCGTGGCCGTCCTGATCGA 56695 30 100.0 35 .............................. CTCGTAGACAGACCATTCATGGCCAGCGCGCGGAT 56760 30 100.0 38 .............................. TCATAGTGGCCATAAAACATTGGAAAACGCTACTCAAA 56828 30 100.0 38 .............................. GCGGGGAAAAACCGCCCCCGCCACCCTGCGGGCCCAGC 56896 30 100.0 37 .............................. CGCAGATGAAAGCGCTCGGCTATCCGAAGGTTGACCT 56963 30 100.0 37 .............................. GCGATAGCTTCAGCGAATACATCCAGGAAGAATTGGA 57030 30 100.0 35 .............................. GTTGCCTGTGGGCTCTATAAAATCCCAGGTACGGC 57095 30 100.0 36 .............................. TTGAAAACTCTTGCAATCGCGCCAATCGATGCGAAC 57161 30 100.0 35 .............................. CTGGCGGAATATGGACGGCGATCAAAAACGTTGTA 57226 30 100.0 38 .............................. TATGAAGAAGAACGCGTATTTGACGGCGGGGACGCCCA 57294 30 100.0 35 .............................. CAGCAATGGCGCAATGGGAACGCGAAAATACAGCC 57359 30 100.0 35 .............................. TTGTGTATTTTGCACCCCCCTGTTAGTACCCGGGG 57424 30 100.0 35 .............................. CCCCCACACCCCAGCGCAAAGGGACCAATCCCTTT 57489 30 100.0 37 .............................. GCAACGGCAAAGGCGCATGGCAATGGGCGAGCGATTA 57556 30 100.0 36 .............................. ACGGTGTGCACAGCAGCACGTTTGGGCTTATCTATG 57622 30 100.0 37 .............................. TTACAACGCCAAAGCGAGTACCAGCATCACGCTGGAG 57689 30 100.0 37 .............................. TTCATTGGTGCTAAAAAGCTGGAAGGCCTAAGCCATT 57756 30 100.0 37 .............................. TCCGGAAACAGGCCAGCCGACACCAGTCTGGTACAAT 57823 30 100.0 37 .............................. CCCGCTGTCACAAACCGGATCCGGAGACAAGCAGGCG 57890 30 100.0 36 .............................. CAGCTCCCGCGGCTATTTTTTCAGCTGCTGCGACAG 57956 30 100.0 37 .............................. AAAAGCGGTCGGACGAAGAAAAGGCGCGGACGGACGA 58023 30 100.0 38 .............................. CCGGAACCGGGGCAGGGCGAGGGAAAATACCGGGCCGC 58091 30 100.0 38 .............................. CAGTCGTGCTTTTCCGCTAGTCCCTCTGCTATCTCTGC 58159 30 100.0 38 .............................. TCAAATGAAGTCTTTCCAGCTCATCCCCACCCGGGCAA 58227 30 100.0 36 .............................. CGGCTAAATATGGCACGTCTGTCAGCCGGCTAGCAA 58293 30 100.0 35 .............................. ATAAAAAAAGAAGCGACACGCGGCCGCTTAGTATT 58358 30 100.0 35 .............................. GCTCCTACCTGTTCGTCTGTGGATGCCGTTTCTTC 58423 30 100.0 37 .............................. ATGTCGTCTGGATCGAGATTGATTTTAAACAGCTGAT 58490 30 100.0 38 .............................. ATGGGAATGTTTATGGAAACACCATGCAAGCAAATAAC 58558 30 100.0 36 .............................. TCTATAAGTGGATGTAGGTTATCCACATTCATATCA 58624 30 100.0 36 .............................. CCGCAGTCATCACAAGTAGTATATTCATCATGAAAT 58690 30 100.0 36 .............................. ACATGGTCAAGCACTTCTAAGACATCATCCAGCACG 58756 30 100.0 36 .............................. TTGTCAAAGGAAACGTTCACCATGTCCGCCCCCTCC 58822 30 100.0 35 .............................. GGTTGCTATGGTCTAGTACATCAGCAATCATGCAC 58887 30 100.0 35 .............................. TCTTCTGGTTGTGCCTGTTCCGGTTGTGGCTCTTC 58952 30 100.0 36 .............................. CCCGGCTGAACCTTTCGGCCAGATCTACGTCAATCC 59018 30 100.0 36 .............................. CGGAGATTGGGTGGTTTCAGTTGGATAAAGATTAGG 59084 30 100.0 36 .............................. AAATTTAGCGCAACTTTGGACATTGAAAAAGATGGG 59150 30 100.0 35 .............................. TTGTTGTAAGTTACGGAGATAGCTGGATAAACCAA 59215 30 100.0 36 .............................. TCGGGTCATCAACGATGGATGACAACTTAGCTGACT 59281 30 100.0 36 .............................. AGGAACGGCTAGCCGGATGTTTGGATAGGGATAATC 59347 30 100.0 37 .............................. TTAGAAAAAATCGGGTTTAAGGATCCGGAAGTTACGG 59414 30 100.0 37 .............................. CGCCGAAAGGTACCCAAGTTGTGGACGGCGAAAATAC 59481 30 100.0 38 .............................. CCGAGACATAAACCGTGTTACTGCCAGATTTGAGTTTT 59549 30 100.0 36 .............................. AAGTCCTCTAATCTAAAGCCTTCGTTCCACCTGGCC 59615 30 100.0 36 .............................. CCCTTTTTGGCGGCGGGGGCTTAATTTATGCCGTTA 59681 30 100.0 35 .............................. CCTTTCGTTTCCGCCTTCCTGCTCCCACTGTCTCC 59746 30 100.0 35 .............................. GAAGCTATCAACTGGGAAGAACTGGGCGAAGCCGT 59811 30 100.0 35 .............................. ACATTAACACGTTGCTCGTTGTCGGCACTTCCCTT 59876 30 100.0 37 .............................. TCCGTTTATATAGTCTGCGGCAGCAGTAACGATCGCT 59943 30 100.0 36 .............................. CCTAAAATAAAAACGCGCCCCGTTTTCTTTTTCGTT 60009 30 100.0 34 .............................. AGCAGTGTAAACAAAAAAAGAAGGAGCTGAAAAG 60073 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 129 30 100.0 36 GTTTGTATTTTACCTATGAGGAATTGAAAC # Left flank : TTCAGCAAACCCTAAATAGGGCTTGCTGAATAAGCAAAAATCCTAGAGTTGTAAGGGTTCTGTCAGCTTTTGCTAAGCTTTAAATGCAAGGGTTTTTTGAAAAATGCAGGAAAAGTATTACACCTGAAAGCTGATTCATCGTAAAAGACGGCGGAATCTGGCATTTTCGCAGATGCATTTTTCTATAATATAGAGGCAGCGTTACAATTGCAACAGGACGAAGCCTCCTTCTATAATATTGAGGTAGCGTTTACTGGCAAATCGGATACAACCCAAAATCCGATTCGTTCAGTAAGCCCTAATAAGATACTCGTCAAAAATGTCGTCGACCCTCATTAGCGTAGAAAACCCGGGGGATCGACGACAAATTGTTAAAAACGGATAAGCCTTTGACACTATTGGTACGGCTGTATTCCATTGGATGTTAAAGAGATTTTTTTGAGAAAGCAGGAAAATCCCACAGTCATGGAGAAATGTTATAATATCAATCATTTTATGGG # Right flank : CTTATTTCTGTAAACCGGCTTTCCTGTTTATTGCAAAATTAAAGTGCAGAGATGTGCAAAATTTCTATGCAAATGGTTATGCAGAGGGGCTTTACATGGAGGGGTAGCCATGATAACCTGTTTGGGTTTGCCAAATCTGTTACAGCTGGCCGCTTGGCAAAAGAATCATGGCTGCAGAGGCTCCATGTCAAGCCCTTAATAGCGAGAATTCAGATTGAATTTTTATGCGGTATAAACGAATTTATATACTGCAATACTCTGCACTTTTTTCTTGCAAAAAACACTTTCCATTTCTTCGTACACTGTTTGTATTTTACCTATGAGGAATTGAATCTCGAAAAAGCAAGCGCAGGGCGTGCATGATGTCATGTTTGTATTTTACCTATGAGGAATTGAAACATAAATGTATAATGTGTGCCATATTGATTAGTATGTGTTTGTATTTTACCTATGAGGAATTGAAACCGAGTTCGCGAAGTTCGGCCGTCGTTTTGGTGCTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATTTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA // Array 2 60406-61241 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFMQA010000009.1 Weizmannia coagulans strain BA375 NODE_9_length_97154_cov_308.365956, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 60406 30 96.7 35 ............................T. TCGAAAAAGCAAGCGCAGGGCGTGCATGATGTCAT 60471 30 100.0 36 .............................. ATAAATGTATAATGTGTGCCATATTGATTAGTATGT 60537 30 100.0 38 .............................. CGAGTTCGCGAAGTTCGGCCGTCGTTTTGGTGCTGGAT 60605 30 100.0 38 .............................. GTCTTGGTTTTTGGGATGTCTGGCATGTCAAATGTACC 60673 30 100.0 38 .............................. CCCGTGTTCCGTCAAGCGTACAATTCAGCGTGAGATAC 60741 30 100.0 37 .............................. AGGAATACTCCAGCCTCGATGTGGTCATTGGTGCTTT 60808 30 100.0 36 .............................. CACGAAAAAGCTCCTTCATTGTATCATCAACAACCC 60874 30 100.0 38 .............................. ATAGGAAAATTTGCAATGACCCACCGTTTACCGCCCCT 60942 30 100.0 37 .............................. AGATATTTCTCAGCCGCGCTGCTTCCGTCCAGCTCCG 61009 30 100.0 37 .............................. CGCCGTATTCTTCAGCTATTACTTTCAGCGTTTTCTT 61076 30 96.7 38 .................A............ AGTCGGCATGACTGAAATAATTTAGGCAGATTTTCATT 61144 30 93.3 38 .......C.........A............ CATTCCGGGCAAAGTTCGGAGAAATACCGGTCTGCCTT 61212 30 93.3 0 .......C.................A.... | ========== ====== ====== ====== ============================== ====================================== ================== 13 30 98.5 37 GTTTGTATTTTACCTATGAGGAATTGAAAC # Left flank : TCCGTTTATATAGTCTGCGGCAGCAGTAACGATCGCTGTTTGTATTTTACCTATGAGGAATTGAAACCCTAAAATAAAAACGCGCCCCGTTTTCTTTTTCGTTGTTTGTATTTTACCTATGAGGAATTGAAACAGCAGTGTAAACAAAAAAAGAAGGAGCTGAAAAGGTTTGTATTTTACCTATGAGGAATTGAAACTTATTTCTGTAAACCGGCTTTCCTGTTTATTGCAAAATTAAAGTGCAGAGATGTGCAAAATTTCTATGCAAATGGTTATGCAGAGGGGCTTTACATGGAGGGGTAGCCATGATAACCTGTTTGGGTTTGCCAAATCTGTTACAGCTGGCCGCTTGGCAAAAGAATCATGGCTGCAGAGGCTCCATGTCAAGCCCTTAATAGCGAGAATTCAGATTGAATTTTTATGCGGTATAAACGAATTTATATACTGCAATACTCTGCACTTTTTTCTTGCAAAAAACACTTTCCATTTCTTCGTACACT # Right flank : CCTGTAATCCCGCGGGTTTATATTGCCGGCAACACCTAAGCCGACATCTCCGCCGGTAACAGCTACGACTGGCGGGGATGTTGGTTATTGTTCTGTTTTCAATCGGCTGCTGTGCTCTCTCCATGTTAAGAAAAAATCGGAAAGGGAAGCGAGCAAAAACACAAGATAAATGATTAAACCGGGTGTATCTGATGCATGCGAATCGGAGAGGACCCGCGTTTTCCACTTTTTTGGGAAACATCGTTTGGTGTACCGCATCGTACTCTTTTTGCTGCCAGAAGTGCTGCCGGTAATAATTCCGGTTCCTACTGTTCCATGCAGCCTTGTATGCAGCTGCCTGGCCAGAAAGAAAAGAGCCCAAGTCCCGCCTGCAGGAATAATAAAACAGAAGCAAGCAGCCCTGCCCAAAAAAGATTTTAAAGTTTTTCCCATTGAAGGCTTGCTGAGCGAACCAGACAAAGCTTTATCTCTGGTTCGCTCAGCCGCAAAACTGGTTGATG # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATTTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //