Array 1 4407395-4416655 **** Predicted by CRISPRDetect 2.4 *** >NC_008576.1 Magnetococcus marinus MC-1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 4407395 33 100.0 33 ................................. AGGAGGGTATGGAGGCACATATTCATTACTATT 4407461 33 100.0 35 ................................. ATCGACCTTATGCGTGATTTCGACTGGGGTGAAAA 4407529 33 100.0 33 ................................. CTAAAGCCTTTGATAGCTCGGTCAAATATTGTG 4407595 33 100.0 34 ................................. CATCAATTTGCAAGTCCACATCCCAGGTTGCCGC 4407662 33 100.0 35 ................................. TGCAGCTGTTAAGGCCATGTTAAATATCTCCTGTA 4407730 33 100.0 34 ................................. CTTATGGCAGCAACTGCACCTGATAGGGTTAATT 4407797 33 100.0 35 ................................. ATAGATGCGACTGGCAGGGTTGACCCACCTGTCAC 4407865 33 100.0 36 ................................. CGTTCTGTGGCTGAGGCTGCCCCACAATATTTGACC 4407934 33 100.0 35 ................................. CGCGATTGGCTTGAAGATGCAATCCAGGTGAACAT 4408002 33 100.0 34 ................................. GCCTCGAAGCCACCTAGCTATAGAATCCGGCTTT 4408069 33 100.0 35 ................................. TTTAACGTCTTGTTTTATATCGGATTGATTCTCGT 4408137 33 100.0 35 ................................. TGCATTACGCAGGTCGGCGCCGCTTAGGTTTGCGT 4408205 33 100.0 34 ................................. CGCCTGCTCTCGGTAGGCTCCCCATGGATCTGCC 4408272 33 100.0 35 ................................. TGTTGCAACGCGGGTTATGATCTCAGGCAAAAAAC 4408340 33 100.0 34 ................................. TCTTTCATTTGACAAAGGGATCAAGGCTGAGCAG 4408407 33 100.0 34 ................................. TGTCAACTCCTCGAAATATATTGCAGCATACTCG 4408474 33 100.0 33 ................................. AAAGAGTTAGTTGAAACAGATGATGGAGTAACC 4408540 33 100.0 33 ................................. TCAATTTTGCTTTGATTTTCAGTTGTTAAGTCA 4408606 33 100.0 35 ................................. CATGGTTACACCTATCCAATGGTCTATCCTGTGCT 4408674 33 100.0 35 ................................. CAAAGTTTTCGGCTGTTTTTGTTACCGCCACGACC 4408742 33 100.0 35 ................................. CCAGCGTAAGTGCGTACCACCAGCTCCCACCCATC 4408810 33 100.0 34 ................................. ATTATCAAGCGCAACTAGGGCCTCATATTTTTCG 4408877 33 100.0 35 ................................. AGCTCAACCATACGGTGGAAAGTAACGCCAGGGTT 4408945 33 100.0 33 ................................. GGGTGACATTGTTGGAGCTATTAACACCCTTGC 4409011 33 100.0 34 ................................. TAGGGATGCTTAGCGACCGTACTGCAACACGATC 4409078 33 100.0 33 ................................. TTACCATCATTATACCACACCCATAATTTAATG 4409144 33 100.0 35 ................................. TGGGAATGGGCAGCAAACCTACCAACGGATGAGGT 4409212 33 100.0 35 ................................. TTTGTCCCATATCTCCCATACTGTTAACCGCTTGC 4409280 33 100.0 36 ................................. ACAGGCAGCATAGATGGTTTGTAAACAACATGGATC 4409349 33 100.0 35 ................................. TGCCGCACAAGATGCCATGAAAAGACATGACTTAA 4409417 33 100.0 33 ................................. ACTTGATCTCCACGATAGCCAGACCTGCAGCGG 4409483 33 100.0 35 ................................. CCGCTCAAGGCTGGCATCGTCTACCCATTGCGGCC 4409551 33 100.0 35 ................................. GCAAAGCAGCATCGAAAGAAGTTGCTATAGGCGTG 4409619 33 100.0 35 ................................. GCACTAGGTAAATGGAACCATGATAATAATTAGAT 4409687 33 100.0 34 ................................. GATATGTGCCATTGCTTTGTGTGGTGGAAGATCA 4409754 33 100.0 35 ................................. ACATAGTTCTGTAACCGTTCACAATATTTAGAAAA 4409822 33 100.0 36 ................................. ACCAAAGAGCAGTACCAAAATATGGTAGACGATGGA 4409891 33 100.0 33 ................................. TTTGCGAGAGTGGCTTGCTCAGGGTCTCGCGCT 4409957 33 100.0 35 ................................. CGGAACCTGGAATTGCTTGCCATTTTTTGAAGTGC 4410025 33 100.0 34 ................................. CGGCGTGCCGACAACAAAAGCAGGGTTGGCGGCT 4410092 33 100.0 33 ................................. TAACCATCATTATACCACACCCATAATTTAATG 4410158 33 100.0 34 ................................. ATATCTCCATGTCCGAAGGGTTAGATGTTAATTG 4410225 33 100.0 33 ................................. TCTACTAGCACCACTCAGTAAAGATCATCGTAA 4410291 33 100.0 35 ................................. AAAAACATCTAGAACTTTGTCTTTTGGGACATCAT 4410359 33 100.0 33 ................................. GCTGCTGCTCTCTGCCGTTGCTCCGCTTGTATC 4410425 33 100.0 34 ................................. GAGATAATTTAGTCAGTCCCAATAGAGCGGTTTG 4410492 33 100.0 33 ................................. ATTTTGTCTACAGACTCACGCAGATATAACAAC 4410558 33 100.0 35 ................................. TAGCCATGCACGCAAAATGGTTAGCTGGTGATAAA 4410626 33 100.0 34 ................................. ATTAGCAACCATGTATTATTCAAATGTTGTATGA 4410693 33 100.0 34 ................................. CACTCTCCACGCTTGTGCTGTACCACCGCTAGCA 4410760 33 100.0 35 ................................. TCCTTTGCTCGCCCATTTCGGATATTGAGCGGTAA 4410828 33 100.0 35 ................................. CTTAGTGTCCATGTACTCAACAAGGCCAGCCGACA 4410896 33 100.0 34 ................................. AAGGACGCGAATCCTGACAAGATCATCTTAAAGC 4410963 33 100.0 36 ................................. TTGTGCATCCTTCATAGGAGTAACTTTAACCCGCCA 4411032 33 100.0 34 ................................. CAATTATCTATAGAGAAATACTCATCTAATGCCG 4411099 33 100.0 36 ................................. TCGATCAGCAGTTGCAACTGGCAAAGGCTAAAGGCG 4411168 33 100.0 33 ................................. GCAACATCCAGGAAACATCGCTGAGTATAACCA 4411234 33 100.0 36 ................................. GTAAACTCTTGAAAAGGTTGAAAAATGTCAGAATAT 4411303 33 100.0 35 ................................. TAGTTTGTCTTAGGTGGCAACTCAGGAACGTAACA 4411371 33 100.0 35 ................................. TTTAGATGGTTTAGGTTTCTTCCCAGAATCGGTGG 4411439 33 100.0 35 ................................. TTGTTAACCGTACTATCTTCCAGCTTTGGCAAAAT 4411507 33 100.0 34 ................................. GAGTCGCACACCATGCCTACACCATCGGTTTTGG 4411574 33 100.0 33 ................................. TTTTGAATCAAAACGATGTTATCAAAATAGAGC 4411640 33 100.0 33 ................................. CGCGCACAGGAGAGGTGTATTGTTTCCCGGTTA 4411706 33 100.0 36 ................................. GGCTCTTGTAGCCACCGCCTTACCCTTGACTGAGCC 4411775 33 100.0 33 ................................. TGATCATTACAACAGCGCTCCAATGTCATAAGT 4411841 33 100.0 34 ................................. TCCGCCGCCAGCTGCTCCACCAAAAATAGCAATA 4411908 33 100.0 34 ................................. TTTGTCTGCTCAGTCATTACGGTAGGCCTGCCCA 4411975 33 100.0 35 ................................. ATTAAGAGGTCCAAGCTATGATAAACAAGCGCATT 4412043 33 100.0 35 ................................. TGATTTGACGGTCGGTTAACATGGTAAGTCTCCTG 4412111 33 100.0 35 ................................. TTTGCGAGAGTGGCTTGCTCAGGGTCTCGCGCTGC 4412179 33 100.0 34 ................................. TGGACCTGCTCAGTCATTACGGTAGGCCTGCCCA 4412246 33 100.0 35 ................................. CGATGAGCTACGGGCCGCCCATGGTGAGCATGTCA 4412314 33 100.0 34 ................................. TGGTGGATTTTTGTTTACCTTTGGATAATCTCGA 4412381 33 100.0 34 ................................. TTTTGGGGGTAGCTTTGGCTCTGGTTGTTGCCGT 4412448 33 100.0 33 ................................. AAGGTTGCTGATACAAGCTATACTTACACTGCT 4412514 33 100.0 34 ................................. TGTTAACTCCTCGAAATATATTGCAGCATACTCG 4412581 33 100.0 35 ................................. CGCTCAAGGCTGGCATCGTCTACCCATTGCGGCCT 4412649 33 100.0 36 ................................. TGCCGCACCGTAGCTATATACCATACCAACGCAGCT 4412718 33 100.0 35 ................................. TGCCGCTAATGTGTCGGCCTGGATTGAACGCGCGT 4412786 33 100.0 34 ................................. TTTAGTGTACTGCTGTATAGGCTGAATAGATGAA 4412853 33 100.0 36 ................................. AAAACAAACTGTTATTGATGCATTCAGGAATGAAGG 4412922 33 100.0 33 ................................. TCGGACTATGTGAAAGTTTACACCTCAACAGAT 4412988 33 100.0 35 ................................. TCTCCTTGACAATTTTATAGCAAGGTCGATAAAGA 4413056 33 100.0 35 ................................. GCTGGTGGTCGAATCAACTGATACTCGCACCCACG 4413124 33 100.0 33 ................................. CTGATATTAAATTATTAAAAGCACCTGAAGCCG 4413190 33 100.0 35 ................................. AGGTAAACATGGCTCAAATGCTTATTAACCGCGAC 4413258 33 100.0 34 ................................. AACAAGTGCTTTACAAGCGAGCATTTGTTTGATT 4413325 33 100.0 35 ................................. GATGGTAGTGGACAAATGCTTAGCAAGATGTGGCA 4413393 33 100.0 35 ................................. ATAACATTATCAAGCATGGATGGCGCTGCCCGCTC 4413461 33 100.0 34 ................................. TCAACATAGGGGGAAAAGATCTCCCAGCTACCAA 4413528 33 100.0 35 ................................. AAGGCCGACACAGGAGCTATGAAATGAGCATTACC 4413596 33 100.0 34 ................................. AAATTTTTGACCCTCGTCATAGGGTCAGTATCAA 4413663 33 100.0 35 ................................. CGCTCCAGCCTGATTGAGGCTGGAACAGGAGAGCT 4413731 33 100.0 34 ................................. AAGCTCAATTTTACTCACATGTTTGGCTGCGGTT 4413798 33 100.0 34 ................................. CGCTCCAGCCTGATTGAGGCTGGAACAGGAGAGC 4413865 33 100.0 33 ................................. TGTCAACTCCTCGAAATATATTGCAGCATACTC 4413931 33 100.0 33 ................................. GAGGTTTGCATCGCTCAGGCATGCACCGCTTAA 4413997 33 100.0 34 ................................. CCAAGTTTTGCTTGTAGAGGCTCATTAAGATATC 4414064 33 100.0 36 ................................. GCTACAATGGTATCCGTTGTTTCGAAACATTACGGC 4414133 33 100.0 37 ................................. AAGCTATACTGGTTAGATCCATCTAAAGTTGAAAAAG 4414203 33 100.0 35 ................................. GGCGACTTCTAACCTATCTGTTAACGTTGCAGGTG 4414271 33 100.0 35 ................................. AAGGCCGACACAGGAGCTATGAAATGAGCATTACC 4414339 33 100.0 34 ................................. AAGGACCTGCTGCTGCCTCACCTGGCGCAACAGG 4414406 33 100.0 35 ................................. TACTTCAATGGATTCTTCGAAAGCGCTTTTCAGTT 4414474 33 100.0 33 ................................. CCTCGACAATGTTGCTCATAACGTTTGCAAAAT 4414540 33 100.0 34 ................................. GGTTTGCATCTTCAATTGTTGCATTTGCTGTTGC 4414607 33 100.0 35 ................................. AGTGGCTGCGTTGGTGTGGTAAATGGCTACGGTCC 4414675 33 100.0 33 ................................. AACAAATCACGCACAAAACGTTGCACCTCGGAT 4414741 33 100.0 34 ................................. GTTGGTTGAACCATCCACGTGGGCCGCTCGCACC 4414808 33 100.0 35 ................................. CCCTGCATCCTCAACCGGTGCAGGTTCGACAATAA 4414876 33 100.0 35 ................................. CCATCCCCTATCTATATCTCGCGTGCTCATCGTGT 4414944 33 100.0 34 ................................. TGCCAACAAGAAAAAACCATCTTCTAGCAATATA 4415011 33 100.0 35 ................................. CATGCTTTCGATGATCCTGCCAGCATCATCGATGC 4415079 33 100.0 33 ................................. TTCGGTTATTGGATCTTCCGATCCAACAGCACG 4415145 33 100.0 35 ................................. GTATTAAGGGCGAGATAATCGCAGAAAAATACCAA 4415213 33 100.0 34 ................................. TACCGTTGGGTGAGGTTTTGTTAGCTATCGATAC 4415280 33 100.0 36 ................................. GAGGTTCTAGCATTGCCAGCGAAACGGCAACAGCGC 4415349 33 100.0 34 ................................. TCACCCGGCAAGCCTGTTGCTGCTTATGCAATGG 4415416 33 100.0 36 ................................. GCCGAGGTAGTTGTGACTACAAAATCAAAACGACCC 4415485 33 100.0 34 ................................. AACCGTTGTAAAAGCAAACATCTTGTAAGCAATA 4415552 33 100.0 33 ................................. ATGGTCAGTCTCCTAGTGCGTTTTGTCTGTTTT 4415618 33 100.0 34 ................................. TTTATGCCTGGCAGCATAGTGCTTATCACGTAGC 4415685 33 100.0 33 ................................. GTGATGAATACTCAGACCGTGAGGATTGGAGCC 4415751 33 100.0 34 ................................. ATTAACATCTTTAACCGTGTCTAAAGATGTAGTG 4415818 33 100.0 34 ................................. GTTCGCTACGTTTTTTAAACTTTCCGTCTCTGTC 4415885 33 100.0 33 ................................. CCTATCCCGATTTTGGCCTTTTTTTAGCGTTTT 4415951 33 100.0 34 ................................. AGCACCACAACCCCGCTTTTAAACGCCAAACCTG 4416018 33 100.0 34 ................................. CACATCCACAGCCAAATCAAAGCGCCCTACAGAC 4416085 33 100.0 34 ................................. CCATTGCCATTCCACTGGACAACCCGTTGACCAA 4416152 33 100.0 36 ................................. TACCGAAGATTTAGTTATGCCGTTATAGCAAGACTT 4416221 33 100.0 34 ................................. AGGTGGCTAGAGACACAAGGCCGACCAAGAGCCG 4416288 33 100.0 34 ................................. CCCACATAGAGTTTCGGTTAGCCTGTTGCTGATT 4416355 33 100.0 34 ................................. CATTGTATCAACAGGCACCACAGTTAGGGCCTTT 4416422 33 100.0 34 ................................. TTTTGGTGGAACTGGCGGTGTAAAAGGGCCAGTT 4416489 33 100.0 34 ................................. AAGGTCTGCTTAAGGATTAATGCCATGACTGCTT 4416556 33 100.0 34 ................................. ATTTGTGCAATAAAGCACATCGGGAGCGGTGCAT 4416623 33 75.8 0 A................A...AGAA.C.....T | ========== ====== ====== ====== ================================= ===================================== ================== 138 33 99.8 34 GTCGCCCCCTCCCACGGGGGCGTGGATTGAAAC # Left flank : CTGCTTTTTTGTGGCGTTAAAAGGGTTTTAGCATGTTGGTATTGATTAGTTATGATGTTGCCAGTGGATCGGGTGGTGCCAAGCGGCTACGACGCATTGCCAAGGCGTGTCAGGATCATGGACAGCGGGTGCAATATTCGGTGTTTGAGTGTTTGATCACACCTGCCCAATGGAGCATGCTCCGGCAACGTCTATTGGATGAGATGGACGCGGATCAAGATAGCCTGAGATTCTATTTTCTTGGTGCTAACTGGCGTAACCGTGTGGAGCATGTGGGTGCTAAGGCGGGCTATGATCCCGAGGCCCCATTGATTCTCTAATACAACGCGCACCCCAGGTTCACACGCTTTTACTGGCGCATTCGCGTTTTTATATTCCCATGTTTTTCTTTGGTTTTTTATTCTCATTATGCGAATAGATGCCCATTTTTCCCCAAAAACTGAACGGTCCGCGCAAACCGTCTGTTTTTATCATAGAGATCACTATGTTATAATCGCGCG # Right flank : TTTAATGCGTACGGCCTTTATGTACGAACCTTCATAAAAATAGCCAGGCTAAATTGTCTTTTCACATATGCCACTCACACGACTCAGTCTGCCTGTTTTTTTAAGCTCTGCACCCTGCTAACCTTACCTACCCATACCAAACCTTCATCACTCAATGCAGCCCCAGCGCGCTAACGGCATATCCCCCCTCCCAACATGCCAAATGCGTTTCATGCTCGCGACCCCCAACCCCCTCACCAAAATCTCCCAATAACCTACTTTAACTGCGCCAATAAATGATGGTACGTCACCTTGGCTCGCTCAAACTCATACTCATCCAGCTCACTTTCCAACTGCGCCATCAAGGGTTGATACACTTGCCCCGCCGCCATGCCCCTAAGCTGCTTAACCCGGTCTAAAGCTTCTGCATCTCCATCCCTAATTAATGCACCAAGCGCCAATAAACCCTCCTCCAGCCCCGCTTGCTCAGCCCCACTGGGCAACGCCTGCACATTGGCCAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTCCCACGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 88% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //