Array 1 761590-761234 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHIH010000001.1 Clostridium paraputrificum strain 4928STDY7387862, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 761589 30 100.0 36 .............................. CTCATATTAACCCTTTCTTGAGTAGTACCAAATATT 761523 30 96.7 36 ...........C.................. TGCTGTGACATATACTCATCTTTTTGACAAGTAAAG 761457 30 100.0 34 .............................. TGTGATTCTTTTTCCCATAAATTCAAACTTTCTT 761393 30 100.0 37 .............................. TTGCACAGCAGGGATTAGCAGAAGTGGAGCTGTAGGT 761326 29 90.0 34 ......-........GA............. CTCCGTAAAAACTTTATTGGCCATAGATAAATCT 761263 30 93.3 0 ...............GA............. | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 96.7 36 GTTTAATATTAACAAAGGTTGTATTTAAAT # Left flank : ACAAAAGATAGAATATAAAGCTAAAGAGCAAGGAATAGAAATTAAGAAAGTTAATCCTAAGTATACAAGTAAAAGATGTAATAATTGTGGTTGTATACATGAAGATAATAGAGATTGTAAGAATCATCAAGCTAGGTTTGAGTGCAAAGTATGCGGGCATGGTAAAGATACAGATGTAAATGCTGACGTAAATGCAAGTAGAAATATTGCTATTCCTGATATAGATAAGATTATAGAAGAAACCGAAATATTACATAGTGAAAATAAACCGGCTAGTTAATTCTAGCTTACAATAAAGGTTGATTTACCAACCTAAATCGAGTATCTATAACATAAAACTAAGAATATTAGCAAGTTTATAGAAGAATATCTCGATAATGCTTCAGGTGTTAAATCACTTGGTAAAGGTTGTGTAGGGGAGTGGCTTTAAGTCAGAGTTCTACACCGATACAACTCTTTGAATGAATATAAGTTTAAATACAAATAGCTTATTTACAATG # Right flank : GCATATCTTATTAGTCCTAAAAATATAAAAAGTAAGGCTAGAGAACTTAATCCCTAGCCTTTAGATAGTAATTGTAATATTCTTCTTTTGTGCATCTCTTCTTATAGCATTTCTTTCTTTTTATCTTTTTGTAGTAGAATTTGCTTACTAAGTTATAAATCCTATCTAGCATAATCTTACCTCCAAATTATTTATATAAAACACTTGCAATCTAGTAGCGAAGCGTTAGAATCGTTGGGAACTGGTTGAGAATTTTGGATATAGTAAAGCCGAGAATATCGACTTATTTACTATCGTTGGTTTACTGTATATCGAACCCCATCAATAGCCTTACTAATTGTTTCTACTATCTATACACCCATAGCATTAGTAAGGTAGCACAATGTATATTCCTCCACCTTAATATTTAAAGTCCTTTAGGCATTGGACTTAACGTAACTAATAATTATGTATTAATTCCGACCTCAATTTATGCATCGACTAGGCTATCTACTAGAATT # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATATTAACAAAGGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 912088-913358 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABHIH010000001.1 Clostridium paraputrificum strain 4928STDY7387862, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 912088 29 100.0 36 ............................. TAGACTTATAATCCTCCAATTCTTGCTTTATTCTAT 912153 29 100.0 36 ............................. ATTGTTTCTATAACAGTAGTTATTTGCTCTCTGAAC 912218 29 100.0 36 ............................. CAATAAAGAAATAATTGATATTAATTCATATAGTGG 912283 29 100.0 37 ............................. TGGGATGATATTAAGAAGTGTAAATGTGGGGGACAAC 912349 29 100.0 37 ............................. TTCTAATACTTTTAAGAGCTAAATCTGTGCAATGATA 912415 29 100.0 37 ............................. AAAGGTGCTACTGGTGCAAAAGGTGACAAGGGAGATA 912481 29 100.0 36 ............................. TATAGATTTATCTATCTCTTCATACTCTTGAGCAGT 912546 29 100.0 35 ............................. TTTAATGTTTATTTATTTAACCATGATAATGTTAA 912610 29 100.0 36 ............................. AAAGCAGATATTAAAACAGATACAACAGATATATTA 912675 29 100.0 37 ............................. GGAAAACAAATTGTATTACAAGAAAGGAGTTAAAATG 912741 29 100.0 36 ............................. TTGCAAAAACTCCCTTAATCCATTTAAGACCAGCCT 912806 29 100.0 37 ............................. ATTAAATTAAGTTATGCTTTTTCTAAGAATATAACTA 912872 29 100.0 36 ............................. AAAGCAGATATTAAAACAGATACAACAGATATATTA 912937 29 100.0 36 ............................. TGCTTTGATATGCAATGATCATATATGCTAAACCTT 913002 29 100.0 37 ............................. ATAAAATATTGCAAAAGATATATAATGCAAAAGAAAA 913068 29 100.0 36 ............................. TATTCTCTTTGGCAAGTCTAAAATAATACCTCGAAT 913133 29 100.0 36 ............................. TTTTAGGTCGACTAAAAGGTAAAAATAAAAAAGTAA 913198 29 100.0 37 ............................. GCAATTACAGCAGGATTTACTAGTGCTGGTACTCAAG 913264 29 100.0 37 ............................. TAAGGAACAATTCCCCCTAGCCATTTTCCAGCTTTAG 913330 29 89.7 0 ..........................GGC | ========== ====== ====== ====== ============================= ===================================== ================== 20 29 99.5 36 GTATTAGATTAACTATAAGGAATGTAAAG # Left flank : ATGAAGAGTATAAAGCTTTAAAAGCATGGTGGTGATATAATGTTTGTTATTGTAACGTATGATGTGGGAGAAAAGAGAGTAAATAAAGTCAGAAAAAAGTTGAAGATGTATTTGACATGGACTCAAAATTCGGTGTTTGAAGGCGAAATAACAGATGGAAGGTTAAAAAAATGTTTAGCTGAACTGGATAGGGTTCTAGATAGAACGGAAGATTCTTTGTATATATATAGGGTTAAAAATAGTAATAATGTAGTTAAAGATGTTGTAGGAGAGCTGAAGAATTATGATGATCTATTTATATGATTTAAAAAAATAGATTTGCAGTAAATCACATATAATGAGGATATGCTCTAAACCAAGGTATTTACTTAGATGAGAATAGGATTATTTAAAAGTGTTTAAACATTACTAAAGGTTTACTGCAAAAGTGTTAGAAAAGGTGTATAATTAGGTAATGGAAAGTGGCTATTTTACAGTGTTTTCTGCAAAATATTTTTAGG # Right flank : CGTCGGATATAAATTAACATTAACATGAGATGTATTTAAATAAGGTAAATTATATTTGAAAATATAAAGATATATAGAATAAGATAGCATGTCCTTATCTATCATAAAAGAAAAACCTAGAAAACTAGTTTTTTCTTTGTGAAGCAACATAACCAATAAATTAGTTAGATAGAGCAAGCTGTATATTTAAGATATCAATTTAGTTTTAAGAAAATTATGTAATAAATCTTTGCCAGTTCTAGTTTTTATAACTTCTTTCATTCTATCCAAACCAATCTCATAATATCCTTCTTCAAAAACATTAATCATAAGATCAGCTTCAACTAAAACTTGAAAATCCATTCTATCAATTTTTTCATAGCTGTGATGCATCTTTATTAAATAAAGTATTCTATGAATTGCTTTTTCTTCATATCCAGCATCTTTTAATAACTCACGAGCTAATAGGGGAGCCTCTTTTCTTTGAAGTTCTTGGCTTGCATCTCCATATTTTTCTTTAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAGATTAACTATAAGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //