Array 1 2695830-2696041 **** Predicted by CRISPRDetect 2.4 *** >NZ_QYAZ01000001.1 Komagataeibacter medellinensis strain ID13488 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2695830 29 100.0 32 ............................. GCGTCATTTGGCTCCTGCGTAGAGAACAGATA 2695891 29 100.0 32 ............................. CGCGCAGTATCCGCGCGCAGACGGCATCCATT 2695952 29 100.0 32 ............................. GGTCTGACAACCGTGTTGTCCGCAGGCGAGAT 2696013 29 82.8 0 .............C...A...C.A...G. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 95.7 32 GTGTTCCCCGCACGCGCGGGGATGAACCG # Left flank : ATGTGGCGCGCCGGAGCGGGGACCTTGTACTCAACATTCTGGGCCAGGGGCAGGGCGGGCTGGCCTTTACCTTCTTCAAGCACGCCGAATACGCGGATGGGAAACTGGCCGGGCAGGATATTGGCTGGGCAGCCAATGGCGCGCCCATCCTGAGCGCGGCCCCTGCGGCGGTGGAACTGAAGGTGCGCCATGTTGTGGAACTGGGCGACCACCACACCTTCATTGCCGAAGTCATGGACGTGCACCTGACCCGCTCCATCACCGGTCGGCCGGATGAATCGGTGCTGCAGATGAAGGACCTGGGCGAGAAGGTTTTCTACGGCGGCTGAAAGCCCATGCTGCGTCCGGTGCCGTACCTTGGGTCGTCCCGATACTGCCCGTCTGCCATACTGAAACGACCCCTTTTTTAATGGCCGGAATGGGGTAGGGTTAAGGCTGAAAAAGTTGGTAGATTCTTTGACAATAAAATATTTCTTTTGAATCAATGGGTTCCAGGAAGA # Right flank : GCCCTGCGCAGCAAAAAAAGGGCAGGCCGCTGTGCAGGAACGCCACACGTCCCGGAAGGCAGAAGCCTGACCTGTGATTTTGACATGCTTTTGGGCAAGACCCCTCCGGTATCTTGCTCTCCAGCCTCTACTGGCAATACGGAAAAAAGGTGAAGCCGTGCCGGATCAGGACGAACAGGGGCTGGCGTTTTTTTGGGGAAAGGCCCGGCCGGATGGGGCCGAAGGGCAAGGGGCCGCCGCCATGCACCCCCTGCCTGCTCATATGCTGGATGTTGCGGCGGTGGCCGCCCTGCTGCCGGGTAGCGGGCAGATGGGGCTGGACCGGCGGCAGATCGCACTGCTTGTGGCGCTGCATGATATTGGCAAGCTGGCACCCGCTTTTCAGGCCAGGGAGCCGGCATGCTGGCCTACGCAGGTGCTGGGGGCATGCCCCGACAGCGTGGTGCAGACCCGTCATGATGCCGATGGCCTGCTGCTGCTTGCCCATGTCTGCGCCGATG # Questionable array : NO Score: 5.65 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCTCGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2705600-2706238 **** Predicted by CRISPRDetect 2.4 *** >NZ_QYAZ01000001.1 Komagataeibacter medellinensis strain ID13488 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2705600 29 100.0 32 ............................. TGGGCTGCGGTTCACGCGGGACTATCAGATTG 2705661 29 100.0 32 ............................. ATCCACGCATGATCGCATCCAACGTCGCCAAC 2705722 29 100.0 32 ............................. CCGGGGTAGATCAGACGCAGCCTATTACGGTT 2705783 29 100.0 32 ............................. GCGCTGAAGGGCAGTTGGGCCGCGCAGTCGGA 2705844 29 100.0 32 ............................. CTGAGGGAAAAACCATTGTCTGCGCGCCGTAC 2705905 29 100.0 32 ............................. AGTTCGCATGACCTCCACCAGCGACGCCGCCG 2705966 29 100.0 32 ............................. ACGCTGCTCGGCAGTTCTGGCGAGCAGTTGCA 2706027 29 100.0 32 ............................. CTGGAAAACAGGGTCAGTAACGTGGAATTAGC 2706088 29 96.6 32 ..........................T.. GATCGTCGAAATCCATGCGCGTCGGTGGCGCG 2706149 29 93.1 32 ........T...........A........ ATCGAGGGAGCTAACCTTATTCTAACATTAGC 2706210 29 89.7 0 ............T.....A..C....... | ========== ====== ====== ====== ============================= ================================ ================== 11 29 98.1 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : GTGCTGGCGGCAGGCGGGCTGGAACCGCCCCCGGCGCAGGCGGAAGCCATGCCAGTCGCCTTTGTGGAGCCGAAAGGGCCGGGTGATGCTGGTCATCGTGGTTGAGAACGCCCCGCCGCGCCTGCGCGGGCGGCTGGCGGTGTGGCTGCTGGAAGTGCGGGCGGGCGTGTACGTAGGCAGCTACGGGCAGCGCGTGCGTGAGATGATATGGGGGCAGGTTTGTGCCTATATTGGTGAAGGCAACGCGGTAATGGCCTGGGCCGCGCCAACCGATGCCGGCTTTGCGTTCGACACCTGTGGCAGCAACCGCCGTGTGCCGGTGGATTTTGACGGCCTGCGCCTTGTCGCCTTTGGCCCCGAAGCCGCCCTGCCCACACAGCCCGGCCCCATGGCAACCCCGCTTTCACGGCGGCGGAAAAGGGAGTAGAAAAAAGGGCCATAAAGTTGGTAGAATCTTTGACAGTAAAATAATCTTTTGGAATCAATGAGTTCCAGGAAGT # Right flank : GTAACTGTATTTCCGCTGATCTGTGAAGTCAGTGATGTCGCCAGTCTGGAAGTAAAGCCACCGTGACTGATCAGGATGGTCGGGTCGGGCCTGTCGATCTCGTAGAGGGATTGAGTGGGGTGTAATCTTCCATCGCACACCATTGGGGTCGATCCCTTCGCGCATGCGCTGCCGGGTATTGGTCATCATGAGAGAGCCAAGGGCTGCTAGAACAGGCGTGGGATTGGTACCGATTGCAGCAATCCGGCCCAACGCAGATGCAATCGGATCGGTGCTGCCATCAACGGATATGTAAATAAAGTTATGATGGAAACCTCCCGGTAAATGGCGTATGTTCATGTCTGGCATGCGGCGACACGGTGATATTCTGCTGGCCGTAGCACCGCCGTCATGGCGGGAGCGCTTTGCGGGGTTTTGTAGCAGGCCCCGTCCGCGTGCCATCAATTCCCTTTTTCCTCATCCGGGTCAGGCAGTAGTAGTTCGCTTTAGAATACACGGCG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 2713401-2712945 **** Predicted by CRISPRDetect 2.4 *** >NZ_QYAZ01000001.1 Komagataeibacter medellinensis strain ID13488 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2713400 29 100.0 32 ............................. CCGCTGATGCGCTGGTCGATCAGGGTGTGCTG 2713339 29 100.0 32 ............................. ATGCCTGCGAACGGGAAATACCGCCCGCGTCC 2713278 29 100.0 32 ............................. TCTGACCGTGCAGAGCATTCCCGGCCGGATGG 2713217 29 100.0 32 ............................. ATGCCTGCGAACGGGAAATACCGCCCGCGTCC 2713156 29 100.0 32 ............................. TCTGACCGTGCAGAGCATTCCCGGCCGGATGG 2713095 29 100.0 32 ............................. GGCACGCCGATGATGGTGCGCTGGACGTTCTG 2713034 29 100.0 32 ............................. TGTTATTTTCTGAACCACAGATCAGCCAGTTT 2712973 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 100.0 32 GTGTTCCCCGCACGCGCGGGGATGAACCG # Left flank : CCAGGGTGTCTTCCTCATTGGCGTAATCAGTACTTTCCTGCCACAGCAGGTACAGCTTCTGGTTCATTTCCTCTACCTGGCAGTCATGTTCCAACTGCTGCGCACTGACCAGCCTGCTGGGGGCCGTGCGGTACATGCCCAGTTCCTGCTGTGCCTTGGCAAAGACCCGCCGCCGTTCCTTGATGGCAGGCAGGCTGATATCCACAAAGCTGAGAATTGCCACATTCAGGCCAGCCGACAACTGCACAACCGCCTGAAAATCACCCCAAGTCTGGCTCACGCTGGCCCTCCGGTCTCAAATAGCCGCAAGAACGATACCGCATGCCACCGCCGAAAAGCAGCCTGCAAAACAGGCGGGCAGGATTGCATTCATTCCGGGGTTGGCCCCATGGCAACCATGCTTTCGCGGCGGCGGAAAAACAGGTAGAACAAGGGGCCATAAAGTTGGTAGAGTCTTTGACAGTAAAATAGTGATTTGGAAACAATGGGTTCCAGGAAGG # Right flank : CCCACGGCACCATTGGCTGACCGCACAATTGATGACCGTATCCGTAAGGGATTTTTTACCCGATGAGCCGGGTCTGCGGACGGGCGATATGCGCGACAGTTACGGCACGCGGGTAAGTGGCGAGGCGCTGCGGGTAGAGGCGTCAATCGGGTCAGATGATATCAAGGCTGTGGAGTTTGAACTTGACCGAATGGAACAGAACAATTACCAGCCGCCGCGACCTGAACTGTCCGTTGCCGCCTTCAGGAATGAAGGGAAGGTTGCGCGGCATCGGTCGCATGGTAGTGCGGGCGATTGAAGGACGGCCACTTCCAAATGCGCGGGCTGATGAGGCTCAATAAACATTACTCCGCCGCCACTGTATCCGACACAGGCACGAGCAGATCGGCCGGTATCCTCCAGGCGTTACGGATAGCGGCAATCATCGCCAAACTGAGGGAGCGACTGCCGGACATGATCTCGCTGGCCCGTGATCGGGAGCCAATCACGCGCGCAAGATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCTCGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //