Array 1 87070-82522 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNRR01000039.1 Trichococcus shcherbakoviae isolate Trichococcus ART11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================================== ================== 87069 36 100.0 30 .................................... AGCCGGGTTCTTCTTTTGTTCGGATGGTCC 87003 36 100.0 30 .................................... ATTACAATACAAGTTACGAACGTTAACCAA 86937 36 100.0 30 .................................... TCTAGTTCCCGCACTCATTTTCTCATAGGC 86871 36 100.0 30 .................................... GGATGGCTCTGCATTGATCATCGCATACGA 86805 36 100.0 30 .................................... ATCATGGCGGGTGTCTTGGCATGAAGTGCC 86739 36 100.0 30 .................................... CTAAGCCACTCTATACTCTTAGCTAGAGTG 86673 36 100.0 30 .................................... TGCCTCGGGGTCATATGTTCAAAATCCTGA 86607 36 100.0 30 .................................... TTCTGCTTCGCCTTATGTGCAAACAAATAG 86541 36 100.0 30 .................................... TTGCAGTTCTTCAATGATCGCCTGAACCCT 86475 36 100.0 30 .................................... ACTTATCAGAAGTTAACAGCGGTTTGAATC 86409 36 100.0 30 .................................... TAGTTTGCCGTTTTATGGGGAAAGTACAAA 86343 36 100.0 30 .................................... TAAAGTCGATTGGATGTTTCGCTTTTATGA 86277 36 100.0 30 .................................... AGGCTTGTATTCCCATCGTTCAGCGTCACA 86211 36 100.0 30 .................................... TGCCGATGATTTATTAGCACAAGACCAAGT 86145 36 100.0 30 .................................... AAAGGCTGCCCAATGGCGAATGGAAAAAAT 86079 36 100.0 30 .................................... CCGCTAATCAGGTGCTGCAGCTGTCCGATT 86013 36 100.0 30 .................................... AGAGCGCATCACGGCAGATTCGGCAGAGCC 85947 36 100.0 30 .................................... CTCTTGTCCAGTATCCGGCAGACATTGCAC 85881 36 100.0 30 .................................... TTCAATCCACATCCAGCACAGCTGTCCTAC 85815 36 100.0 30 .................................... TTGGGATGGGCTACTACCGTCACAAGGAGG 85749 36 100.0 30 .................................... AGTCATCGGGCAATGACATCCGTCGCATTG 85683 36 100.0 30 .................................... AAAAAGGAACTCACATAAAAGTGAGTTCTT 85617 36 100.0 30 .................................... GCATATCGTTCCCATACAGTCTAATTGCTT 85551 36 100.0 30 .................................... CGGGTTATAAATTCAGGATTGATGCATCTT 85485 36 100.0 30 .................................... TCCCGTCTTCATTGCTTAAGCAATGGGAAC 85419 36 100.0 30 .................................... GAAGTACTACCAAATGCCGAAAGTTTTTTT 85353 36 100.0 30 .................................... GAAGTGCTACCAAATGCCGAAAGTTTTTTT 85287 36 100.0 30 .................................... TAGTCCGCAAAATTACATGGGCGTGCATTA 85221 36 100.0 30 .................................... TGTGGAGGTTGTTCCTACCCTAATACATAT 85155 36 100.0 30 .................................... ACAGGGGCTTGTATCCATGCTGAATGGGGT 85089 36 100.0 30 .................................... TTTCCTGCTGTTGGCGTTCAGGGTTGAACA 85023 36 100.0 30 .................................... CACTTCAGGTTCAGTGTGATGCCAGTCGTG 84957 36 100.0 30 .................................... CCACACCTTTTCGATTCTTAGACAGCTGGG 84891 36 100.0 30 .................................... CAGGTGGAAGATCAATAACATTCCCTTTTG 84825 36 100.0 30 .................................... TAGTAAATAAGCAACACGGCAACAGCGAGC 84759 36 100.0 30 .................................... TTATCCGTTTTGCTGATTGCAATAGGTGCA 84693 36 100.0 30 .................................... GGATCCACTGGCATTCGTTCGATGGCATTA 84627 36 100.0 30 .................................... TGACATTTCCACCCACTACGCTACACAATC 84561 36 100.0 30 .................................... CGAACAAGAAGCATTGGTCCAGTCAATAAC 84495 36 100.0 30 .................................... GGCTATACAATGCCCGATATCAAGTCCTAG 84429 36 100.0 30 .................................... GTCCGAAGCACTAGCAAAAGGTATCGGCAA 84363 36 100.0 30 .................................... CATTACTTGCTCTGCTTCCGTAAGAACTGA 84297 36 100.0 30 .................................... CGATACCCTTGCGTCTGATTTCCTCGATGG 84231 36 100.0 30 .................................... AAAAACCGCAAATGGTAATCCTGTGATTGG 84165 36 100.0 30 .................................... TGTTATCGACCTCACAGCCGCATTTGGAGC 84099 36 100.0 30 .................................... TAGCAACAGATGCTGCGATCGCTAGTACAC 84033 36 100.0 30 .................................... CCAACGCCTCAGTTGTTACAACCTATTCAG 83967 36 100.0 54 .................................... CGCAGTGAAGCAAAGTGATGAGACGAAGCAGTTTTATTTTAGCCNNNNNNNNNN 83877 36 100.0 30 .................................... TGTTATCGACCTCACAGCCGCATTTGGAGC 83811 36 100.0 30 .................................... TAGCAACAGATGCTGCGATCGCTAGTACAC 83745 36 100.0 30 .................................... CCAACGCCTCAGTTGTTACAACCTATTCAG 83679 36 100.0 30 .................................... CGCAGTGAAGCAAAGTGATGAGACGAAGCA 83613 36 100.0 30 .................................... CAAGCAAGACTATCTCCATCACAGTCCTTC 83547 36 100.0 30 .................................... TAACCAGATTATCGACAGTACCAGTCCAGA 83481 36 100.0 30 .................................... CAACAATTTACCGATGTCGCGAATTGATAT 83415 36 100.0 30 .................................... TGCAATGTAGCATTGCCATAGATTTCAAAG 83349 36 100.0 30 .................................... AACATATAGTAATGCATAACTCAAAATTTG 83283 36 100.0 30 .................................... CCTGGTGAAGACGAAGAAATTTGGGGAGCA 83217 36 100.0 30 .................................... ATGATGCAGGTAAAGAGGGTAAGAAGGTTC 83151 36 100.0 30 .................................... CAAAGAGTTGTTCCAGTTCTCTGTTACAGG 83085 36 100.0 30 .................................... GAACGCTGCAGGTCGTTTCTGGCAGGGTTG 83019 36 100.0 30 .................................... CGTTAGGCATCTATCATCCGGTAGGTGCTT 82953 36 100.0 30 .................................... GCGGTGGCGGACCGCTTGATGAAGGCGAGG 82887 36 100.0 30 .................................... TCTTTAATTATTTTTGCAATTTCTCCATCA 82821 36 100.0 30 .................................... AATAAGGCATAGCCGAAAAAATAAAAAAAT 82755 36 100.0 30 .................................... CATTTGAGATTGAGGGTGATGCCAGTCGTG 82689 36 100.0 30 .................................... GTCAACTCACTTATGCAGACCTATGGCATG 82623 36 97.2 30 .................................G.. ATGCTTCTTCACTCCTTAGAATAATGTAAC 82557 36 91.7 0 A.....G.............A............... | ========== ====== ====== ====== ==================================== ====================================================== ================== 69 36 99.8 30 GTTTTATTTTAGCCGATTTTGTAAGGAAACTATAGC # Left flank : AATGAATTACATTCCCTTACCAACGCAATTAGAAAAACTGTATCTTCCTATACCAATTGTTGCAGAAATAACACAACAACCAATTTGAAATTGCCCGAATTGGTTCCATTGCGACCGCACGAGTATGAGTAGCCGCTTTATGAGAATGGTGGTTATGTTCGACTTACCCGTGGAAACGAGAGAACAAAGAAAAATTGCAACAAAATTTAGGAAGTATCTATTGGATGAGGGATATGTAATGATGCAGTTTTCGGTTTATTATCGGATTTGTAACGGAAAAGACATGGTAAATAAATATCTGTTGCGCTTGGAAGATAATGTTCCGGAAAAGGGTTCTGTCAGGTTAATTACCTTGACAGAAAAGCAATTTAGTGAAATGAAAGTTTTGGTAGGTGGCGTTTCACCTATCGAGGATAAGTTGGATTCTAGCAATCTGTCAGTATTTTAGACACGCAAAATGGCCCTTCATAGCTGATATGAAGGGCTTTTTTGCGTGAGAT # Right flank : TTCAACAGTTTAACGTCAGATCGAACTGGGTTTATTTTATAGAGCAAAAAAACTAATCCAATCCTCAAAATGTGAAGATTGGACTAGTTTATCTTTCATCGGGCAGGGTACATTATGATCAGCACTTTATAAATGTTTTTTTCTTCTTTTTTCCGCAGTAAAGAATATTTCATCATCTGCTCTTCTTCCGATAGCAATGATCTCAATGATTTCTATACTACCATCTTTGCAGGGTTTGAAAATGAGACGAATACCCAGTCTTTGATTCTTTAGTTCTTTAAAACCTGCTAACTTCGAATAGGTAGTGTTTCCGAGGTCTTTACCAATTTCTGATCCTCTTTCTTTTAGTCGATCTTCAGCAGCGTTGACCCACTGTTTCAAAGTGCCATCCAATTTTTTATAATCTCTTTCGGCTTCTTTCCAAAAATACACCTCAGCCATTAGTCAAACAAATCCTTATCAGACAATGCGGAGAAAGGATTATGTTCTTGGTTGGATTC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATTTTAGCCGATTTTGTAAGGAAACTATAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //