Array 1 12909-11661 **** Predicted by CRISPRDetect 2.4 *** >NZ_AGGF01000028.1 Streptococcus sobrinus TCI-50 contig00028, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 12908 36 100.0 35 .................................... TCCTAACACCACTGTTGTTGCTGTTGCTTTCATTT 12837 36 100.0 34 .................................... CTGAAGCCATTTATTGCAGAAAGCGCGATTTTAA 12767 36 100.0 36 .................................... TAGTGGGCTGTATAACGTTCGTATAACGGTAGGCTT 12695 36 100.0 35 .................................... TTAACTGCTGAAAACAGTTCGGTGTTTTTCATTTC 12624 36 94.4 34 ...............T...T................ GCGTCATCGTTAGGTTTAACCTTTGTATGAGACA 12554 36 97.2 34 ...............G.................... TGTTCAGTGTCCGGGTCATAGATTTTTCCGTCAA 12484 36 94.4 35 ......A..........T.................. AGTAATTCTTCATGGTCTTTATCACTCATCTCATG 12413 36 97.2 35 ...............G.................... AATCCAACAAACGTTCCATGTTCTGTCATACCTTT 12342 36 97.2 36 ......A............................. CCTTGCCAGCCTTTTGACTGGCTCCTTTCTTTATCT 12270 36 94.4 36 ............G..T.................... CATATAGTTCATCATGTAAGGGACTCGTCTTAGACC 12198 36 97.2 35 ......A............................. GCTTTGATGTAGGTTGCGATTGGTGAGATGTAGCG 12127 36 100.0 36 .................................... GTGAAGGCTTTTTTGTGGTCCTCAACAGCTTCTAGG 12055 36 94.4 36 .......A.......G.................... TTTACCTTGGCCAATCTTATGTTAGCCCCTTTCCTT 11983 36 94.4 36 .......A.......G.................... TTGATTAAAGATAGCCGTCACTTCTTCGGTTTGTTT 11911 36 100.0 35 .................................... TTGTCATTCATAGGTTGACCGTTCGTTAGTCGTTG 11840 36 94.4 35 ........T...................G....... ATTAAAACTTCGCCTCGTCGGTCAACTAGTTCATC 11769 36 91.7 37 ......AT..T......................... TATAGAGTTAAGGCCTTGTCGCCTCTACGAACCAAGA 11696 36 91.7 0 ...............T..............A....T | ========== ====== ====== ====== ==================================== ===================================== ================== 18 36 96.6 35 ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC # Left flank : ACTCTCTGATAAGAGCCTTTAAAGAAAAAGATCCCAATTGCTATCTGGCTAGTTATACGAGGAGGTGAAGCCATGGGATGCGATTTTAATTTGACGGCAGAAGAACTGCTGTTTGCCAGAAATTATCAGCTCTACTGCCTAGTGATTTACGACATTGCAAATCAAAAGAGACGACTCAAATTGGCACGATTGCTGGAAGGCTATGGCAAGCGGGTTCAGAGATCCTGCTTTGAGGTAAAACTGAGCCAGAAGGTTTACCGTCGGCTGCTCCAGGCGCTTGAAGACTTTTACGAGGAAGATGAGAAAGACTGTATCACACTTTATAAAATTCGTCGGGAAGAGAGGGTCGTTTTCAACTCTTATGATGAGCCAGAAGAAGAGACACAGACGATTATCTTATGATTGCAAAACCTCTATGAACATGATAGACTGTTATCGGATAGTTTCAAGCTGAGGCACAAGATATAGCAGTGCCTGTCTAGACTGACACAAAATATGCT # Right flank : TATCACACCAGTGTATTTTTGCGATAGGTGAATCGCTTTCCTATCGCTGCTTCTGCAGGCTTAGACCTTTCAATCGGTTTTTTAGGAGAAATATCTTCAAAAAGGATTTGACTTTTATCGCCGAAAGGTTTATAATCAGCCAAAAATATAAATAAAAAAAGGGCGCCTTTGCGGTGAAAAATACTTTTCAGCCGGAGGTGCCTTTTCAAATAGAGAAATGATGAAAGAACTAAGATTATTTTTTAAAAGAACAGCTTTGCCGGCGAATGTGCTAGCGGTAAAGCTGCAGGGTTATCTGATGGGTCAGATTTCCGATGACTACGCCGAATTTTTGCACCAGCAGGAAACCAATCCCTATGCCTCCTTCGTAATAGATAGAGGGGATCAGCAAGTCTGGACGGTCAGTCTCCTGACAGAACAGGCTTGTGAGCAGCTTCAAGAAGGCTTGCTGTCTCTGCAGCATATTCGACTAGACTCTTATGCCGAGCTTATTAGCATTC # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAATGCCCCATACCCTCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.20,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //