Array 1 89227-90034 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEFC01000001.1 Wohlfahrtiimonas chitiniclastica strain G9145 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 89227 28 100.0 32 ............................ AACTGCGCACGAACTCTACCGCGTCACCCGTT 89287 28 100.0 32 ............................ AGTAGGATTCACTTTTAAGGATAAAAAATACA 89347 28 100.0 32 ............................ ACTTCTCTTGCATTCGGGCGTCACTTCGATAG 89407 28 100.0 32 ............................ TGATTACTACTTTTACAACGCTGAAAAAGAAA 89467 28 100.0 32 ............................ AACTTGACTCTGGCATCAGGAAATCGATTAGC 89527 28 100.0 32 ............................ GCTTTCAAAAAATGCTCTTGCTCTGCTCGACT 89587 28 100.0 32 ............................ ACATCAATGAAAACTTCGAAGCGATCTTCAAT 89647 28 100.0 32 ............................ ATTTAATAAGCCTATTGGATTAATTTAGACAA 89707 28 100.0 32 ............................ AAAATACATTGACGTGAAAGTTGTTGTGACAC 89767 28 100.0 32 ............................ TTTATCTTTGAGCCACTTGTACAAGTTGGGGA 89827 28 100.0 32 ............................ CAAAAATCCAAGTAGTGTAAATGAAAAAGATG 89887 28 100.0 32 ............................ AGTAACAGACAAATGCACGCCCATCCCAGCCG 89947 28 100.0 32 ............................ ACAATAAATGTGTCAATGCTTTGAACACGTAA 90007 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 14 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : ATGATTACAAGCATTATGGCAGTTTTAACAGGTTGTGCTTCTGTTGAGCAAGATACCGTGGTGCATGATTTTACTGCATATGGCAAGCTCAATGAGCCTTGGCGCATCGTGGTCAAGCATGATGATCAGTTAGAGATTGAAGGGGTAATGGTTCGCGAGGGCACATTGAAAGTGACGCGATCGGCATATGCAAAAGGTGTTGAATTCTCAGGGGATTATGATGGGCAGCCATTGACATTAAACATCCGCTCATTGAAGTGTAAAGACAGCAATGGCGATGAAACAGACTTCACAGCCATGTTCTACTATGGCAAACGTACTTATAAAGGTTGCGCGGTTGCAGGTGCGATTGAGCATGCGGACACTTAAGACCTTTATGGTTTGATCTTTAAAAATTTGGATAAATATCAGTAAATTACATGTCATTGGAAAAGGATTGGTTTTATGGCTATAAACTGCCGAAATCATGATGTTTCCAATGGCATTGTTATATTTTTAAA # Right flank : AGACCGGAGCTGTGCCATCGTAACGGGATTATGAACAGACAGTAAAACTAATTCGTTAAGTTACTCACCATAATACGCCCAAAGCAGGACAGGTTTTTTCTTGGTTTGTAAAAGCTTGTCCACTTTGCGCATTGTGTCATCATCCACAACCGGGCAGCCTTGGCTGAAACCTAAAGGCAAATAGTTTGGGAAAGTTTCTTCATTCGGAATCATCTTAAAAGAGTGGAGCACAATGTAACGCTTAAAGGCATTGCTGTTACTCGCCTCTAGTCCATGGAGTTTGTAGTGAATGCCAATTCCCCATTTGCTCGGTGCGCGGATGCCCACACGGTATTTACCGAGAGAAGATGCATAACTATTCGGTTGATTGCTAAAGACAATGTTTTGATTATCACTCTCAAAGCCTACATTGCCATAACCATGGGCGACGATGCTTTTGATCTGCGGTGATTGTGTTTTAAAATTCCACACAAAAAAGCGATCTTTACCAGAATGGCGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 217866-223541 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEFC01000001.1 Wohlfahrtiimonas chitiniclastica strain G9145 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 217866 28 100.0 32 ............................ TGAGTCAATCAGTCTTTTGTCGAGAAGCGGCA 217926 28 100.0 32 ............................ TTTTTACAACGAGAACATGATTTTGATTCGCT 217986 28 100.0 32 ............................ AGAATGCAAGAGAAGTACGGCTCAAAATTCAT 218046 28 100.0 32 ............................ ATTTTAAATATTCATTCAAGTGGGGCGGCGAA 218106 28 100.0 33 ............................ CCGTTATGTGCTGCTGAATTGCGCGTAAAGTCA 218167 28 100.0 32 ............................ TTTTCAGGATCGAGAGTAGCACTAAATAGCTT 218227 28 100.0 33 ............................ GTTGCTCGTCATTTTCATTTCACCCAATCCTTT 218288 28 100.0 32 ............................ ATATAAAGCCATTATCAAAAGGAGGAGCAGAT 218348 28 100.0 32 ............................ ACTAAATCAATGATCACTAAACGAGTGATTGA 218408 28 100.0 32 ............................ AATGGTGCTGCCAAAAACAACCCACATTATAT 218468 28 100.0 32 ............................ AACAACTTCATACAAGTTATCACTTACATTTA 218528 28 100.0 32 ............................ AAGACGGGTGAGCAATTAGACGATTTGGCAAA 218588 28 100.0 32 ............................ AGATATTATCCGAACTCCATTTATAGCAGTGA 218648 28 100.0 32 ............................ TTGTCTTTGAATTTTTCACCGTGTAGCAGCTC 218708 28 100.0 32 ............................ ACTCTTATATAAGTTCTTAATTGAAGCGCGTA 218768 28 100.0 32 ............................ GTATTTTTCAATCACGCGCTTTGCTGCTAAGT 218828 28 100.0 32 ............................ AACAAACAATGTGAACGTACCTTTGATTTTAC 218888 28 100.0 32 ............................ TGATCTGCGGCTAATTGAAGTGCCTCTGATAG 218948 28 100.0 32 ............................ TCAGCCCCGTTTTTATCTTTGCGACCGGTATA 219008 28 100.0 32 ............................ CGATACAACTCGCCGCCCCTCCTCAATTAATT 219068 28 100.0 32 ............................ TCTCATAAAAAACGGAACATAACCTGACGCGC 219128 28 100.0 32 ............................ CATCGAGTAGCACTAGCGATACGGGTATTACG 219188 28 100.0 32 ............................ TCGATTAAAGTTGAGGCGGTTTTTACTAAATC 219248 28 100.0 32 ............................ GTATATGACTATGTGTCAAAGTCGGAACAGCT 219308 28 100.0 32 ............................ AACTGGTCAATGAGCGGTCTGACGCTGCTCAT 219368 28 100.0 32 ............................ TTTTTTATTCTTGCCATCCGTCAAATAGCCTG 219428 28 100.0 32 ............................ AAGCTAGGGATTGATGAATACACATGGTCAGG 219488 28 100.0 32 ............................ GCTTTACCCCATTTGTTATTTTTGACCGTGTG 219548 28 100.0 32 ............................ GTTCGGATCGTTCCGTGATAGATCCTCACCAA 219608 28 100.0 32 ............................ AATCGGTTTCAGCACCTTTTGGAATTGCCACA 219668 28 100.0 33 ............................ ATTTGGCTCAAATTAAAGACAAGATCGTTGGAT 219729 28 100.0 32 ............................ CATCGCCGGCGTTCGCTTCGTCATCGCTAACT 219789 28 100.0 32 ............................ ATAATGCATCGTGCGCCATGCATGGCAGTAAA 219849 28 100.0 32 ............................ ATTTTTTGCTTGAGCTGCTTTAATTCTTGTTT 219909 28 100.0 33 ............................ CTTAAATTCATCATTCGCCTGAAATCTTTTATT 219970 28 100.0 32 ............................ TTGAAAATATTGCCTTAGCTTTCGACTTGTCA 220030 28 100.0 33 ............................ CAGTAAAGCTAAATTCTCTGACTTGAACTTCTG 220091 28 100.0 32 ............................ ACATGGTAGCGCAATATTCACAATTGTGATTT 220151 28 100.0 32 ............................ ATTTAATTCAGGCGTAGATGACTGCAATTTAA 220211 28 100.0 32 ............................ ATCAGATTGTAATTTATTTGCAAAAATAACAG 220271 28 100.0 32 ............................ ATGTACTAGCACTTCTCAAGTAAATATGAATT 220331 28 100.0 32 ............................ TCTTGTACTTGATACAGTTTTTGTTTCATAAT 220391 28 100.0 32 ............................ GCTTTTAAAGTGCTGAAAGTTGTCATGATGTC 220451 28 100.0 32 ............................ GAAAAGACTTTTTCCGCCTTCCATGTAAACCA 220511 28 100.0 32 ............................ ATTAATGACAAGATCGATGCTTTATTAAATGA 220571 28 100.0 33 ............................ GGTTACATTAAGCAAATTGACCGCAGTGACTGT 220632 28 100.0 32 ............................ TGCACGTCGTTGGCTTGATCTTGGTGTGGTTT 220692 28 100.0 32 ............................ AGCAATGACAAGAGGACGTGCCAACAATCCAA 220752 28 100.0 32 ............................ AATGTGACTTTCGCAACCTACCTTTCGATGAT 220812 28 100.0 32 ............................ ATTTTTAATAGCGTACATTACGCAACCACCTC 220872 28 100.0 32 ............................ TTCACGGCATATTCTTTGTTGCACTTATTGAT 220932 28 100.0 32 ............................ AAAGTACGCAACTTCTTGCATGTGCTCTTGTG 220992 28 100.0 32 ............................ AGTTACGCAACACCCTCCCAACGTATCACGAC 221052 28 100.0 32 ............................ GCATTAAGCTCTTTAAGCTGTAGAGCAACTGC 221112 28 100.0 32 ............................ ATCATTGAGTACTTCAGCAGGTGGTTCACTTT 221172 28 100.0 32 ............................ GCTTTCTCTTTGTCTTTCGTTAATTGGACAAT 221232 28 100.0 32 ............................ AAGTAATGAAGAAACAATCATGCAGATGATGA 221292 28 100.0 32 ............................ ATTTTTAACTCAGCCACCACGTGCCTCCTTTA 221352 28 100.0 32 ............................ GTTTTTGATAGTGAGATAAAAATTCAATCACT 221412 28 100.0 32 ............................ AAATGGTCGGGATGGGCGGATTGGCATTTGGA 221472 28 100.0 33 ............................ TTGCACCGTTAAGTTTTGTGTTACCGTTGCATT 221533 28 100.0 32 ............................ TCATTAAATACAGTTGCAGTTTCTGTTTCATA 221593 28 100.0 32 ............................ AATAGGGGGCACTTAGCCCCTTTTTTTAAGGA 221653 28 100.0 32 ............................ AAAAAGGCAGAGCGAAAGCGCATTATTGATGA 221713 28 100.0 32 ............................ GGCACCTGTCAAATCTTTCAGGTGAATATTAC 221773 28 100.0 32 ............................ ACTCAACCGCCCCTCGGTGCCCACAAAGAGAT 221833 28 100.0 32 ............................ AAGTGTATCGAAAGATGCGTACAGACTTGATT 221893 28 100.0 32 ............................ TGTAAAGCTTTTTGAGCAACAAGCGCCTGGTC 221953 28 100.0 32 ............................ TTGTCCCTGTCGTACGATGGTGACCCGTTAAT 222013 28 100.0 32 ............................ GTGTATTTATTTTTAAATTCTAATGATTGTGC 222073 28 100.0 32 ............................ TTTTTCAGCATCAGAGAGTTTGCGGCTTGGAT 222133 28 100.0 32 ............................ GTGATTAACTGGTTTAAGAAAAAGAAAACGCC 222193 28 100.0 32 ............................ GTGATTAACTGGTTTAAGAAAAAGAAAACGCC 222253 28 100.0 32 ............................ TGAAGAGATTGGCGCATTTAAAAAGCTAAATG 222313 28 100.0 32 ............................ ATGCTTCTCTTTCGTTCATTTATCACCCCTTT 222373 28 100.0 32 ............................ TCAGTGATTCATTTTTTGCCTTCTCTACCCAG 222433 28 100.0 32 ............................ TCTTTCGAGGGCTATATTGAGGATTTGACAAC 222493 28 100.0 32 ............................ GCGCTGATCTTGCTTGTTAGTATTGTACGCTT 222553 28 100.0 32 ............................ ACATTGTTAGACTGATCGTCATAGCACGTTAT 222613 28 100.0 32 ............................ TAGATTATTTCTAGCTGTTGTTACGTTCGTGA 222673 28 100.0 32 ............................ TCGATGGGCTTTGCCTCTCTACACAAAAAAGA 222733 28 100.0 32 ............................ GCTACTAGATCAGGATGAAGCCCGATTAAGCG 222793 28 100.0 32 ............................ GCTACTTCTAAGAAGTAATCCGCTGTTACTGT 222853 28 100.0 32 ............................ ACTGATCTCTGATAACGCTTGATCCCAAACGC 222913 28 100.0 32 ............................ GAAGTTGTATTAAATAAACCTAATGAAATAAT 222973 28 100.0 32 ............................ TGTACGTCTAATTGGTCAAACGGAACATTAGA 223033 28 100.0 32 ............................ TTTGTTAATCGATTTCTTTACTGTGCTGACTG 223093 28 100.0 32 ............................ AATATGTTATATATCTTAAACAGCTACCGTTT 223153 28 100.0 32 ............................ TACGGCATTAACGTAGCTGATTTGCTCAAAAA 223213 28 100.0 32 ............................ ACAAAGAAAAACTCGCAGAGGTTGAAGAGTTG 223273 28 100.0 32 ............................ TGCGCTACAAGATCAAGAGGTCACGGATGGCC 223333 28 92.9 33 ..........G.......A......... CCGAGTAATCCCGAGGATGTCACGCTTAAAGAC 223394 28 100.0 32 ............................ TGTGCTTTGCACAAGATTTTTCAGAGAAGGTT 223454 28 100.0 32 ............................ GCTACTACTGCCCCAGCTCCGCCGCCGGTTCT 223514 28 92.9 0 ..........G.......A......... | ========== ====== ====== ====== ============================ ================================= ================== 95 28 99.9 32 GTTAACCGCCACATAGGCGGCTTAGAAA # Left flank : AGATCGATTATTAGATTCTGTTCATATCCAATCAATTAAAGAGGTTCCCTCTAATATTGAAGGATATGCGAAATATTTTTATTGCCGACCAAAAGGGGAATCTCGATTGAGGAAAGAGAAGAAGGGATATGCTGAATACTACGCTCAATCACATTCGGTATCTGTAGATGAGGCTCTATCTCGATATGATGATTGGGAGTTTAAAAAGGTCTATTACCCTTATATTCAGATGAAGAGTCTTCATCGAGATAATTCATTTAAGCTTTTTGTCAAAAAAGAAGTTGTGCAAGAAGAAAATCTAGAAAATAGCACTCATCAGCTATTTACAACTTATGGTTTATCTGCTGGGGGCATTGTTCCTGAGTTTTAACCATTATTTTTTTGTTCTTTAAAAATTTGATATAATTCAGTATGTTATAAGAAAGGGGGAAATCATTGGTTTTTTAGGGTGAAATACTCAAGAAATTAGGATTTCTCCCTATTTTGAGCATTTAATCTCA # Right flank : AAGTGGTTCCATGGTGAATTTGGAAAGTTTGCGGTTCACTGACTAAAAATTGAGAGTTTATAAATGACATTACTAAAAGTGTTGGTACGACCTTTGTTTGTGTTGAAAATTCATTCATCACATCCTTGCCAGTGTTTGCAGATGCCAATAGCAATACCGGTAGCAGCACACAATGGAATAATTCTGTGAACATTAAAATGTCCATCGATATGTATGACAATGGAGTGATGGATATTGGTGTGAATGCAGAAATTGAAAATAAAAATGAAATCTCAGACAGATTTAAACATTATTGTGGCTATGTGCTTGGGCGTTTATTCAGTGGTCAGTTGTATAAACGCGGCTGGGTGAATAATGAGCATTTTGGTACAAGCAGCCATTAAGACTGTTGCATTTGTAGCCATTGATCAAGCGCGTTGGCAAATTGTTGACGCTCTTTTTGTGATAATGGTGGTGGGCCTGAGGTTTGTACGCCACTTGAGCGTAATTCATCCATAAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACCGCCACATAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTAACCGCCACATAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //