Array 1 2545-2913 **** Predicted by CRISPRDetect 2.4 *** >NZ_FAXW01000035.1 Campylobacter coli isolate H104860240, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================================================================================== ================== 2545 37 100.0 29 ..................................... TAATAATATTGTGATATTAAAAATTATTC 2611 37 100.0 29 ..................................... CATTCTCTAGCTTCCATTATAAAATTACT 2677 37 94.6 29 ......T....C......................... TTTTGCTTGGTTTTATTCAAAAAAATGCC 2743 37 94.6 99 ......T.............................T TCAAACATATTGCATAATATTTTATATTTATTTTTTCATGCAAATATTTAATAAAGTATTATTTAAAAATATAATATTTTTTTAAGTAAAAGAATATTA 2879 35 81.1 0 CAA..-T....-.......................T. | ========== ====== ====== ====== ===================================== =================================================================================================== ================== 5 37 94.1 47 ATTTTACCATATAAACAATTAATAATAGGCTAAAACA # Left flank : ATATTCAAAAAAATGAAATATTAATTCCAAAAAGAGTATTATTTGATGAAAAAACATTAAAAATGATAGAAATGATGATTCCTGCTTACAAAGATGAAATTTCTAATACAAATAAAGAAAATGAGAAAATTAATCAAATGATTAAGCTTGCTATAGAAAAAATGTTTAAAAATGATTTTTTGAATAAAATAAATAATTTTTAATTAGGTTTTTTTATGAATAATGTTTTGTTGCACAGAATAACTGAGAAAGGAAACATTCGCTATTATAGCATAGAAATTATTGCCACTCTATTTGAGGAATATATGGTTGAGAGAGTTTACGGAAATGTGCGTTTTAAAAGTTGCACAGGAAGAAAAAATAATGTATTTTCAAGTTTTAATGAGGCACAAATTTTTTTTGAGAGGTTAAAGAAACAAAAAATGAAAAAAGGGTATGCGTAAGTTTTTGCTTAAAAAACAAGAAAAAACATTGATAAAATAGGCTTTTGATATAAGTCT # Right flank : AAAGGTTTAGCACTTCACCTGAGCGTTTATTCGTTAAAAAGTGCGTTTTCTACAATTTAATTTTATTACAATCCTTTCTAAAGACTAACTTTATCAGGGCTTGAAACTCTCTTATAAGATTTTCATCTAGTCTTTTTGGAAAATCAGGCAAAATCAGTTCATCTCCTACCTTTTCCATCTCTTGCGCTAGTCCTGCAATCTCTAAAGTGTTTAAATTTGCTACATAGCCTTTATATTTGATTAAATTCATATCATGGCTAAATTCAAATTTATTACCATCTATTGTATGTTCTATCAAGTTTATAAAATAATCATCAATGATGATATTTTTTAAATCTATTATATTTGCTAAAATTTTTTTAGAACTTGCTTTAGAAACATTATCCAAAATGCACTCGTATTGAGTTTCTATCAATTTTCCTAACTCATCATAATTAAAAATTCTGCCATTTTCACAAACTGCTAAATTATCTCGTATTAGCCAGAATTTATCACCAAAT # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTACCATATAAACAATTAATAATAGGCTAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:81.08%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-86.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //