Array 1 1538047-1540340 **** Predicted by CRISPRDetect 2.4 *** >NC_018068.1 Desulfosporosinus acidiphilus SJ4, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1538047 32 100.0 35 ................................ TTTCCAAGCCAGATCCATGTGCCATGCTTTAAGGC 1538114 32 100.0 34 ................................ TAATAATGTACAGAAGTTTTCGGCTGAGATTTTA 1538180 32 100.0 35 ................................ TATTCCAAGAATCAAAAATGAATTTACCACCACAC 1538247 32 100.0 37 ................................ AAATGATCAATACACTATAACAGCAGACACCGACACA 1538316 32 100.0 34 ................................ TATAGCACAGGCCAGAGGATTCTCAAGAGGTTTT 1538382 32 100.0 36 ................................ AATAACGCCTTGTTCATTCCGATACTCATCAAACCA 1538450 32 100.0 35 ................................ AGATTTTAGATCGAACTCAATGTCATTGATGGACT 1538517 32 100.0 34 ................................ ATCTTACACCATTTATCTCTTCTTCGGCAAGAGG 1538583 32 100.0 36 ................................ GTGTTTCCAGATTACTTTTATTGCATCTTCGAATGC 1538651 32 100.0 35 ................................ ATAAGCATGAGAACACCAACATTCGAGTTGATTAA 1538718 32 100.0 35 ................................ ATAAGCATGAGAACACCAACATTCGAGTTGATTAA 1538785 32 100.0 34 ................................ TTTTTGATTCTAGACCAAATGAGCTCAAGGCTAT 1538851 32 100.0 33 ................................ TGGCTGCTGAAGGCCGTAGTTAGAAGTCGTTTT 1538916 32 100.0 36 ................................ CTAATTGGTGCGTCTGTACGAGTAATCACAGCGGCA 1538984 32 100.0 36 ................................ TCTCAGAACACTCTCCATGCGCTCTGATTGCTTGTT 1539052 32 100.0 34 ................................ ATCTTTTGCCGCCAATACGACCTATTTCCTAACT 1539118 32 100.0 33 ................................ TCAAGGAAAACGAACGACGGCAACAACTCCTGG 1539183 32 100.0 35 ................................ ATCACGCACAATCTACACGGAACCGTCCCAGGACA 1539250 32 100.0 33 ................................ TCAAGGAAAACGAACGACGGCAACAACTCCTGG 1539315 32 100.0 33 ................................ CTCACGCAGGGCAAGGTCTAAGTCGTGGGCAAA 1539380 32 100.0 35 ................................ CCATTACCCCGCCTGGAGGTATCGGCACACCGGTA 1539447 32 100.0 33 ................................ ATACTGCAAGCAACTTGCTCGATGCTCTATCTT 1539512 32 100.0 33 ................................ ATACTGCAAGCAACTTGCTCGATGCTCTATCTT 1539577 32 100.0 35 ................................ AAAGTAAAAATGAATCAAACGCCTCTCCTCCCTAC 1539644 32 100.0 35 ................................ AGTTGATTGCCCAAATTATGAACCATTTGATAAAC 1539711 32 100.0 33 ................................ ATAATGTTGATCAAATTAGTGAATATCAATATC 1539776 32 100.0 35 ................................ GACATGGAATCCTTCATCAAATCGCTCCTGGCAAC 1539843 32 100.0 34 ................................ TTATCCAAAACTTGCGGTGTTACAATCGCGCTGA 1539909 32 100.0 35 ................................ CTTTTCTTCCTCGATAAACCGTTTCATTTGCTGTG 1539976 32 100.0 36 ................................ AGAAACAATCTGGTCAAACGTTTTATACACCGACAC 1540044 32 100.0 35 ................................ AAATTTGGAGAGGAGGCAGGACTTGAACCTGCCAA 1540111 32 100.0 35 ................................ TTTAATGTCAACAGCCCCTTCGGATTTGTCGTTCT 1540178 32 100.0 36 ................................ CAGTTACCAAACAGCAACCGGCCTTTTTCCACTGAA 1540246 31 96.9 33 .........................-...... ACACCGAAAGGCATAGTTGCATTTGGTTTCATC 1540310 31 90.6 0 ...A..-....T.................... | ========== ====== ====== ====== ================================ ===================================== ================== 35 32 99.6 35 GTCGCTCCCTACGTGGGAGCGTGGATTGAAAT # Left flank : GACGGGTACCCGGCGTTTATGTGGAAGTAGGTGAGAGGATATTTTAGTGCTTATCACTTATGACGTAAATACTCAAACAGCGGCAGGGAGAAAGCGGCTGCGTCAAGTTGCCAAACAATGTGTAAATTACGGACAGCGTGTTCAGAATTCGGTCTTTGAATGCGTGTTGGATATGGCTAAGTTCCGCGAGGTTCAGCATAAGCTGGAGAAGATTATTGATACAGAGAAGGATAGCTTGAGGTTCTATTTGTTGGGGAATAATTACAAGAATAAAGTTGAGCATATAGGCGTAAAGGCTTCCTTTGATGTTGAGGATACCCTGATCATTTAGTGCGAATGTGAAGCGAACATAAAATCCTTGGGGGATTCGCACCTCGAGATAAGAGGGAATTTGTTGAAATATGTAGGGAATGTCGTGAAAACAATTATGTATATTAAAAAAATGGAAGAAGATGAATGAAATCTATCTATATAGAAGATAGTTTTTATTAGTTTTTGCT # Right flank : TCAACAAAGCTTATAACATTCTCGTAACATTGCTGTTGATCCCTACATGGGGGCTTTATATCCTTCCTTTATTTGGACAAATTTTGAATTTTCGAAATTAATAATACCTTATCTTGAGGCAGTGCTAAGTTTAAGAAAACAGACATTCAAAAGGTCGCTCATAGGGGCCACATCCCTCGACCCCAGGGGAAGCAGCTGACGTGGGGTTCCCTGTCCAAGCCTAACCCCCAGAGTGTCTCACTAATTGCCCCAAAAACACCTTAATGCAAGAATAATTAATATGAAGTGGAAAGAGATAACTTACATTTCTAAAATTGTGTCTTGACAAAGGGGTGCGGTATAAGCTACCTATCCGGATAGTTTTACATCAATTAATATGGAGATGCAACAAACAAGCGAGATAATCGAAAAGGATTAAAATATTAGTTGAGAGGTTCAAGTGCAGTTCTAAGAGTGACGGGCGAAATTCCCTCAGACTACTTACATAATAGGATAGGTAT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACGTGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.00,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //