Array 1 244592-242382 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCU01000005.1 Parabacteroides merdae strain BIOML-A22 scaffold5_size335821, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 244591 32 100.0 33 ................................ ACGAACATGAGCATAAGCTTCAGCCCATTTTTT 244526 32 100.0 34 ................................ TCAAAACTACGGAACATGATAAAGTTGCGGAGAG 244460 32 100.0 34 ................................ AGGCATATTCAAAGCATCATAGCGAACATTAACG 244394 32 100.0 34 ................................ TCGCCATCTATTGCGCTCAATGGAGAGGGTAATA 244328 32 100.0 35 ................................ ATTTTTGTTTGGATCGGGAACATCATCGGCATAAA 244261 32 100.0 34 ................................ TAGAGATCTCCTGTATGCCTTTTATTGCCAAAGC 244195 32 100.0 34 ................................ CAAGCCTTGCAATCTTTATTACAACCCTTGGAAC 244129 32 100.0 34 ................................ TATGAAAGAATATACCGTTATATGTTTTATAACA 244063 32 100.0 33 ................................ AGGAAGGTGGTGCGTTAAAGCCGTCCGGTCTTG 243998 32 100.0 34 ................................ TTGACATCACCAATTTTATTAAAAACGTTTGCCA 243932 32 100.0 35 ................................ CCTTTAATACGACATACACACCACTACCTTGAAGA 243865 32 100.0 35 ................................ ACGGCGACGAGCCTGCATAATACGGCGTTTAGCAG 243798 32 100.0 34 ................................ TGCCAATTAGAATCAACACGAGAAACGGGTATGC 243732 32 100.0 34 ................................ TTAACAATCGCCGTTTTGATCTCGAGTGTGAAGA 243666 32 100.0 34 ................................ CTCTGGTCAGAGCCCTATGGATCGCGTTTATATG 243600 32 100.0 34 ................................ AATGAATATATTTATACTTTAACAGAACGTTTGG 243534 32 100.0 34 ................................ CCCCTGAACTTAAAGTTGATGCGGATAGAAATAC 243468 32 100.0 34 ................................ CTTTAATTGATGTAGAAACGAAGATGGCTTTAAA 243402 32 100.0 33 ................................ AGAAACAATGCTACTGTAGATAAAGTAAGAATT 243337 32 100.0 34 ................................ TAATGGGGGAACCGTTTTACAAACAGCCAATATA 243271 32 100.0 33 ................................ AAGAGAAGGATTGCCTAAAATCTCATCTCTACG 243206 32 100.0 34 ................................ ACGACTGATTTAGGCCGCATTACTCCGGTATTTA 243140 32 100.0 33 ................................ ACGGATGTAGATACGATCAAAATCCAAGGCCTT 243075 32 100.0 35 ................................ TGATAAAACAGGAATAAAACACAAAAAACCGTTCC 243008 32 100.0 34 ................................ AGGATTGTATGTAAGTGTAATAAAAAGAGGTGCG 242942 32 100.0 33 ................................ CTGTTTGTCTCTTACTCCTTATTCCCAATTCAT 242877 32 100.0 35 ................................ ACGAATATAAATACGATCAAAGCCCAAGGCCTTTT 242810 32 100.0 33 ................................ TTTGAATTTACCCCCTTTAGAGGATATGGAAGC 242745 32 100.0 33 ................................ AAGGTGCTGCCTATGCTAAAACTCTCGCTGAGA 242680 32 100.0 35 ................................ GACTGTCTGAGTAATAGGATTAACAATAATGTCAC 242613 32 100.0 36 ................................ TTATATTGTACATCTATTGCCATCAAATGAATCATT 242545 32 100.0 34 ................................ AATGGACGAGCCGTTGAAAGAGCTGTCATACTTG 242479 32 100.0 34 ................................ AGTTGACAACCGGTACGCGTGTCCTTCGGAGTCT 242413 32 84.4 0 .......................C....GCCA | ========== ====== ====== ====== ================================ ==================================== ================== 34 32 99.5 34 GTCGTACCTTATATAGGTACGTGGATTGAAAC # Left flank : TTTAGATAATTATCCGGTCTTTTTAATGAAGTAAGTTCATGTATGTTCTAGTTACATATGACGTAGAAACGATGACTTCCGACGGACAGCGCAGGTTACGTCAGGTAGCACGTCAATGCCTGAATTATGGCCAACGCGTCCAAAATTCCGTTTTTGAATGCTCTGTCTCGCCTGCTCAATTTACCGAGTTAAGATTAAAACTATCGGATATCATCGATCATAAAAAAGATAGTATTCGTTTCTATTTCTTGGGAAATAATTATTCTAAAAGAGTTGAATACATAGGTGTCGTCACATCCTATAATGTAGAAGATGAACTTATAATATAACTGTTTGCGAACATTAAGCATTAACAAAAAGCTGGAGTTTTCGCAATCATTGATTATTAGCCTATTAAACACTCCTATTAGTTTTATTTCATCAATAAAAAATCCAAAAAGTTTATTATCGCATAAATGCATTGATAACAGACTGTAAATGTTTGCATTATTTGTAATGCA # Right flank : GAAGTTGATACACGTGTCATAGCCGTCGCACCCGTAAAGGATGCGACGGTAATGTTATTGTTGTAATTCAGACACATTTCAATCCAAACGCACTATTATAACCAACTCAATCTGTAACACCTATCACATCAACAGTAGTTCCTCTACCCAAGCACCGTCCAAAACCAATCCGGCCCGTTCATCATAACACCTTCCATCTTCCAATATAAAAATCCCAGCATACACTCCCACTGTTCCCTGTTTACATAACTGTTCGAAATCCCATTTTCTAATGGATACGCTATACTGCTGTAGCTTACGTAACAACCAAAATTCCGGGCCAATCCGCTTCAGTTCCTCCAGTAAGGTTGCACCATCACCATAGCCGACCAAGATGGATACCGAGTCTTTATCGTCTATCAACCGGAACTTCTCTGCAGCAGTTGCAAACATAAAGTGCATTTCTGCAAAACCTTTATATAACAGACCTTTTATATTAGCCTTATCAAAGGTGTTACAAT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTACCTTATATAGGTACGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 252220-250272 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCU01000005.1 Parabacteroides merdae strain BIOML-A22 scaffold5_size335821, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 252219 32 100.0 33 ................................ CGATATTCGGGAGCAGCCTGCAACATCACCTTG 252154 32 100.0 39 ................................ GCAAATGCAGGCCGTTTGTGATTTCGGCCCAACCCTCTT 252083 32 100.0 34 ................................ GCAATGCCTCCAGGAGACGGGAGCCAATCAGAAG 252017 32 100.0 34 ................................ TAATCGGGGTACAACAACTCGAGAAATAGGTAAT 251951 32 100.0 34 ................................ CAAATAGAGCGACCAGCCTTAATACCAAAAAAAC 251885 32 100.0 35 ................................ TCCGAAGGTGGTGCTTTATCTGAATCCGGTTTGGG 251818 32 100.0 33 ................................ AACCTCAAACATTTAAGTAATGGCAAACGTTTT 251753 32 100.0 35 ................................ ACGACGCCGAGCTTGCATAATACGACGTTTAGCAG 251686 32 100.0 32 ................................ CGTCACCCGGCAATGTTGCGAAAAAAGTACTA 251622 32 100.0 35 ................................ CGTAAATACGGGAGTAATACGACCAAGGTCAGTAG 251555 32 100.0 34 ................................ ATCAGAAGGAAGTCGCTTAACGACAACTCGATGA 251489 32 100.0 33 ................................ AGGATTGAAAGAATCAAGACGCTCGCGATAAGT 251424 32 100.0 33 ................................ TTAAGGCCCAGGTGTCTGAAACTTGGTCTCGTA 251359 32 100.0 34 ................................ CAAACGACACAGTTACCATTAGACTCATAACCAG 251293 32 100.0 36 ................................ GATGATTGCTCATTCTTATCCCCTCATGCCATCAGT 251225 32 100.0 34 ................................ CTTATAGCTAAATCCACGGAATTGATTAAGCTCA 251159 32 100.0 34 ................................ CTTAATGGTAAAAAGACATATAATCGTTGGATAA 251093 32 100.0 33 ................................ GCTATCTCGCGTGTGGCGAGTATGGCTCTAAAA 251028 32 100.0 33 ................................ ATCTTAGTTTGGATCGGAAACATCATCGGCATG 250963 32 100.0 34 ................................ TTGAAAAAACATTTCGCAAACAACTGAAAAAGAT 250897 32 100.0 34 ................................ ATGAAGTTGCAAATGTTACCTTAGCATTATAGAA 250831 32 100.0 32 ................................ TGTTATGTCGCGTTTAAAGGATGCTGGTTTAA 250767 32 100.0 32 ................................ TAAAATAGCTAAAAACAACATTTGGGATATGA 250703 32 100.0 35 ................................ CCCGACCAAGCATGGACAGTCACCGGCAAAACCAA 250636 32 100.0 32 ................................ TTGTGCAGCAATGGCGCGCTTTTGGCGTCTAC 250572 32 100.0 34 ................................ ATTGCCCTCAAAAGGAATACAATAATCCCATAAT 250506 32 100.0 35 ................................ GAAATCAACCTTATAAGCATTACCGTCCTCGTCAA 250439 32 100.0 33 ................................ TTACCAGAGTGCAGGAGTTTTTTCGCAATGCCA 250374 32 100.0 39 ................................ GTCCGTTTTAGAATACAACAGTAATAATGCAACTAATAA 250303 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 30 32 100.0 34 GTCGCATCTTTTACAGATGCGTGGATTGAAAC # Left flank : TACTTCCAGGAGATCCCGTCTCCCCAGAGCCTGTGAAGTCATCCCACTCGTTCCCATCCGCAAGAAACCGAACAACCAGTAAATAATATTGAACAGCATCCCCCCTACCGCAATCGCCCCGATATAGGAAGCGGCCCCCAAATGTCCGACAATCGCCACATCGACCAATCCCAACAAAGGAACCGTTATATTGGATACAATAGAAGGAAGCGCTAACTGAAGTATCTTTTTATTCATTATTTATCGTATCTATAAAAACTATTCCTAACTTTGTCAGCAAAGTTACAGATTACTTTAGAAATAACATGATTACACTTATGTTTCAATAACAAAAACGCGAACCCTAAGTAATTGTAAAAAACGTTGGATGTTCGCATCCTCTATAAATCATACACTTATAGATTTATTTAGAGAATATGAACATTTATTGCTTTTCTACTTTATCATTCGCAAAATTACAATTTAAAAGTGTCATCAATAAAGCTTTTCACAAACATGGA # Right flank : CACTCTTCAAAGGCGCGTTTGAACGTGTCTTTAATGTCGCATCCTTTACGGGGACAACTATTTATAATATTTTTTGCAAGAAGATTACAGGATTAAAATATTTGTTTGTTAGAAAATAAAATATATCTTTGTTGAACAGAGTTATAAAGATACCTTATTACTCAAAGCATAAACACCTTATATTACGTTAACCTAAACATATGATATATACAAATAAAGAATACTGTCTTGAGGTTAAAGGAAGCATGGCCTGCTTTACCCGTCCGGAGATGAAAGTCGAAAGAGTTAGCTACGACATAATAACGCCATCTGCTGCCCGAGCTATTTTCGAATCTATATTTTGGAAACCAGCCATACAATGGAATATTACTCGAATAGAAGTATTAAATCCAATCAGATGGTTTTCCATGAAAAGAAATGAGATTGGAAGTTTAATGAGCCCCCGTTCATCCGGATTATTCATCGAAGATAATCGGCAACAAAAATCCAGTTTGTTACTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCTTTTACAGATGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-1.50,-1.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //