Array 1 128021-132791 **** Predicted by CRISPRDetect 2.4 *** >NZ_WIOD01000010.1 Acinetobacter baumannii strain ABS078 ABS07800010, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 128021 30 96.7 30 ............................A. GAAACGCCTGATTCCTGCAAATGCAAAATA 128081 30 100.0 30 .............................. CCAAGCTTTGAGTATCTGCCGGACGCAAGA 128141 30 100.0 30 .............................. TAGAATGATCTGCTTCAGCATTGGATTGCC 128201 30 100.0 29 .............................. TTGATCTTCATATTGAAAATTTCTTCTTA 128260 30 96.7 30 ............................A. TTCCGCAACTCGCTACTTCCCTGATGCAGA 128320 30 96.7 30 .............................G GAAGATTTGCTTATGGCGTTCTGGAAAGAA 128380 30 96.7 30 ............................A. TGCTTAGTAATGCGCAAAAACGGTCATCCA 128440 30 93.3 30 ............................AG CAGAAGAACGCAGAAAAGCGAGAAGCTTAA 128500 30 96.7 30 ............................A. CTTGAAAGGCTTGAGCTTAAAGCTTTTTAC 128560 30 96.7 30 .............................A CAGCTGGCCGCGTATATAACGGCTCAGTAT 128620 30 93.3 30 ............................AC AACTCGATGTTGGGTATGCAGAGAGCCTTG 128680 30 93.3 30 ............................AA ACTTACACTTCTCAGCGTCAAACCATGCGT 128740 30 96.7 30 .............................G GCAGAACTTTTCATGACGCTCATTCTCTAA 128800 30 96.7 30 ............................A. ACCTATCAACGTTAAACCAACGATTGCCAG 128860 30 93.3 30 ............................GA TGCAGAAGATGTTTTAGAACGTTATGACGA 128920 30 96.7 30 ............................A. TGGGATGTTATGAATATTCGACATTACCAA 128980 30 96.7 30 ............................A. CAAAATAGAGTTGGCCTTCCTGTTTGGCCT 129040 30 100.0 30 .............................. CAAACGCTTCAACCAGCCACGTCTTTGAAG 129100 30 96.7 30 .............................C TTCCGCCAAATTCTAGGAGGTTAACATGCT 129160 30 100.0 30 .............................. GTGCATACTTATTGCCGCCAGCAAGTAAAC 129220 30 96.7 30 .............................C CTTCGGGAGGTTTTCTTTTGGGGTGATCAT 129280 30 93.3 30 ............................AA GTTTCGGCCTAATGGATGCGGTCTTGAAAA 129340 30 93.3 30 ............................AA GGACTATCCGTCCCTTTGCCGTTTTTGTAC 129400 30 93.3 30 ............................AC CCTCGGGTGGTTTTTTATTGAGGTGATCAT 129460 30 93.3 30 ............................AG TGGCGCGTTCAAGCGTGCCATTGAAGCATA 129520 30 93.3 30 ............................CA GAAGTAAGTCTTGCAGATGCACGATCTAAA 129580 30 96.7 30 ............................A. CCGCCGATAAAACCCTTACCCGATACGCCC 129640 30 96.7 30 .............................C AGCTCCCGATTCAACATCCAACAACATGCT 129700 30 100.0 30 .............................. TGAAAGACTTGAACGTGGTCAAGTCCTCCT 129760 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 129820 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 129880 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 129940 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 130000 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 130060 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 130120 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 130180 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 130240 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 130300 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 130360 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 130420 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 130480 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 130540 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 130600 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 130660 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 130720 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 130780 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 130840 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 130900 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 130960 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 131020 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 131080 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 131140 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 131200 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 131260 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 131320 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 131380 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 131440 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 131500 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 131560 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 131620 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 131680 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 131741 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 131801 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 131861 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 131921 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 131981 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 132041 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 132101 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 132161 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 132221 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 132282 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 132342 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 132402 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 132462 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 132522 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 132582 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 132642 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 132702 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 132762 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 80 30 95.8 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGCAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //