Array 1 32312-31551 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAESIF010000057.1 Streptomyces sp. M2CJ-2 scaffold57, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 32311 29 96.6 32 ............................G ACCGCATGAGCGCCCCGGTCTTGGTGGGCCCG 32250 29 100.0 32 ............................. AACGACGGCCTCATCGACGGCGAACTCGCCGC 32189 29 100.0 32 ............................. TCGATACCCGGCTGCCGCACCACCGCACCCGT 32128 29 100.0 32 ............................. GACGCCGGCGGCTGCGGCTGCGGCGTCATCTT 32067 29 100.0 32 ............................. GTCTCCTCGGCGAACTCCGCGCCGTCCTCCTC 32006 29 100.0 32 ............................. GTGCGTACGCCCCGGTCGTGCAGCTCGCGCAG 31945 29 100.0 32 ............................. GGCGCGACCATCAACGGCGGCATCCTGCGCAC 31884 29 100.0 32 ............................. AGCTCAAGGACCTGATCAAGGAACACCCTCCC 31823 29 100.0 32 ............................. GCGGCCGGGCTCACCCAGACGTCCCCGACGGC 31762 29 100.0 32 ............................. GTCCCGACCCCGCTGACGCTGACGGGCCTGGG 31701 29 96.6 32 .........................C... TCGACGCGCGGCCGGTCAAGGGACAGGCCACG 31640 29 93.1 32 ........T................C... GTGTTGCCGGCGGCGTCCTTGACGACGTAGCC 31579 29 89.7 0 ........T...............A..T. | ========== ====== ====== ====== ============================= ================================ ================== 13 29 98.2 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CCCTGCCGGACGCAACTACGGCGGTCCGGACGCGGGCAAGGAGATGACCTGGTGACCGTGATCGTCCTGACCAACTGCCCGGCAGGCCTCCGCGGATTCCTCACCCGCTGGCTCCTCGAAATCTCCGCCGGTGTCTTCATCGGCAACCCGTCGGCGCGCATCCGCGACGTGCTGTGGGACGAGGTCCAGCAATACGCCGGCCAGGGCCGCGCCCTGCTCGCCCACACCACGAACAACGAACAGGGCTTCACCTTCCGCACCCACGACCACAACTGGCACCCGATCGACCACGAGGGCATCACCCTGATCCGCCGCCCCAACCCCAAGACTGACGGGCCCGGCCCTACGGCAGCTCCGCTACGAGGCTGGAGCAAGGCATCCAAACGCCGCCGCTTCGGGCGATCGTAGTGCGCGCTATGCACCATTCAGCGGAATTGCCGGAATCGACGAAAGTACTCCAAAATTGCCACTGCCCCAGGTAAACCCGCAGCTCACACAGT # Right flank : TGTGCTGCCATGAGCCTGAGCTGTGTGCGCGAAGGCTGAACACAACTCAGGGGGTGGCGACGGCCAACTCCAACGCGCCTGCCTGGCCCGCGCGTTGGTGCTCTGCCCCCGCCGGCTGATCTGCGACGAGATGACCGCGATGCTCGACGCGTCGACCACGGCCGCACTGGTGGCGGTGGTCGAGGCCTACCGCACCGAAACCGGCGCCGGCCTCCTCGCCGTGGGCCACGACCGCACCCTCCTCGACCGCTGGTGCGACCACACGGTCCACTGGGACACGGTGACGGCGAAGAACGCGGCGGACGGGGAGAGCGGCCAGGACGGCCCGCGAAGGAGGAACGGCCCGGCCGCTCTCGTCCGCTCGAAGTGACCACCGGGCGATGAACGGGCCGTGCCGACCGCGCACCGGCGCGGGCACGCCGGGAACGGTGCCGGTCGCGCGGCCGATGAGCGTGCGGGGCGAGGCGGCATGACGGGTGCCGTCACCGCCGTCACCGGCC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 41991-42263 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAESIF010000057.1 Streptomyces sp. M2CJ-2 scaffold57, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 41991 29 100.0 32 ............................. TGCACGTCTACCGATTCACTCATGGGGGGAGC 42052 29 100.0 32 ............................. CCCGAACCCGGTGCGCGTTCTGGCAGTGCAAC 42113 29 100.0 32 ............................. ATGGGCCGCCGGCCGTAGGGTCCGCTCCAGTA 42174 29 100.0 32 ............................. GACCAGGGCGCGCCCGTCAGCCTGGTCGCCGT 42235 29 89.7 0 ...........GT.T.............. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.9 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : GTCGTGCACACCCGCAAGCCACACTGCGAGCCGCCGGGCATCCGCTTCCCCTTCGGGCAGCGCATCGGCAACCAACTTCCGTACGCCCACGGGCAACCACTCGTCCCACAGCCGTCCGGCAACAGCAGCGCTGTCCTCCATGTGCCGCCACAGCGGCAGCCACCCATCGGAGTCCCAGTCGTGCTTCGCCCACACGGTCAGCACCGGCCCGTCGAGCCTGGCCCGTAACCCCGTGCGGGCTCCCCCCTCGTCTGTCATGCCAGAGGTATACAAGATAGGGAGAACTCGCGATGGAGATATGAAGAAAACGCGGATGATCCGCCCCCGATCGAACCGTAACGCCACGGAGGCTTCGATCGACACATAGGGTCGACCCTTTGCGCTGCGGCCACTTCAGCTACACGAGACAAGGCAAGAATAGTCAAATGCCCCACTTGCCGGTTTCTGTGAAAGTGCATGAAACCATGCCCACCCCCCGATAAACTCCCAGGTCACGCAGT # Right flank : CGACCGGTTCTTCGGGCAGGGCCCGTTCGGGCACTACTCCCAGCCGAAGCGGGGTGCTCCGCATGGCCTCGTTGGCTGACGGAAGACGGCCCCGTGCTCAACTATTCGGTGTACACGGGGCCGTTATTGACCTCCGCCGGGTAGGTCAGGCACCCAGCTCGCCGGTCTTCACGGCAGTAACGAAGGAGGTCCAGCCTTCCGTCGCCAGGATGAGTACCGGGCCGCCCGGCGTTTTACTGTCACGCACGGGGACGACGGTGGTGAAGTCGTCGGCAACTTCGACGCATGCGCCGCCGTCCTGGTTGCTGTGACTGCTCTTGCGCCACGCAGCGGCGCTCACGTCGACGATCCGCACGGCACTTCCTCCAGCAGGCGCAGGATGTAGTTCCGCGACTCGGCTGGGGACAGCGCCAGGTCGCGCACTGAATCGTACGCCTTCTGGAGGCGCACAACCGGCGCTGTTTCTTCAATGAGTTCACCCCGGTACCCGTTCTCCGTGT # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //