Array 1 48385-49226 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QGPQ01000001.1 Staphylococcus pseudintermedius strain MAD511 1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                         	Insertion/Deletion
==========	======	======	======	====================================	========================================	==================
     48385	    36	 100.0	    38	....................................	CTATTTCTTTATTCATTTTAATCAATTCCTTTTCTGTT  	
     48459	    36	 100.0	    36	....................................	AACCGCTTCTTTGTATTCCTCAAATGAGAAGTTTTC    	
     48531	    36	 100.0	    38	....................................	GCTATTTTCTTTGTCATAATTATCAATTCCTTTCTTAT  	
     48605	    36	 100.0	    35	....................................	ATCTTGAGTGATGTAGCTTGTAATTAAAGGCATCT     	
     48676	    36	 100.0	    38	....................................	GATTGCTTATGGAATTCTATATGAAGCATCGTATAGAA  	
     48750	    36	 100.0	    34	....................................	ACATACTAAACAACTCCTATAATTTTTTTATTTA      	
     48820	    36	 100.0	    39	....................................	TATAAAGAAAAACACCCATAAAATTCCCTAGATATAGGA 	
     48895	    36	 100.0	    37	....................................	GATTAAGTTTGCTATGCTAGAGTTAAACCCACTTTCT   	
     48968	    36	 100.0	    40	....................................	GGCTCAACTGATTGCGGATATTTAACTAAGTGCGATTTAT	
     49044	    36	 100.0	    39	....................................	CCTGTATCATCATAGGAATAACGTTTATCTTTTTTTGCA 	
     49119	    36	  97.2	    36	....T...............................	TTCTAATTCGTTTTGCGATATTTCTCAAGAATTCCA    	
     49191	    36	  94.4	     0	............C................T......	|                                       	
==========	======	======	======	====================================	========================================	==================
        12	    36	  99.3	    37	AATCGAATAGAGACCCCGATATTAGGGGACGAGAAC	                                        	       

# Left flank :   GTGAAAACTGGAGATGAAGTCAAATGTGTAACGTATAGTTGAAAGGTGGTAATACAGCGGTTTTGGCAATTTAATAGGCGATGGAAATGTCAAGGCACAATGCATATTCCGATTAATTTTTTAAATACGAAGAAGTTAGGAATAAGCAAATATTGAAGTTTGCACAGCTACAGTATATTCGGCCAGATGTTAATTATTAAAAAGAAAGTTCCAGTATTCAAAGGAAGAGTAGAAAATGTATGATAATTATCATTAACAAGACTTCGTTTAATTGAAAGCGTTTAAAAAATATAGAAGAAAGTAATCATGTGAATAGGATATGAATTAAGAAAGGTTTATTGTATAATATCTATGATATGTTTTGAAATATTTATAGTTGGTTGAAACTGAAATGTCTAAAAATTGGACAATAGTGGTATTTTTAATATTAAATTTGTCTTATTTCTAGACATGATCAAAGTATAGTTATCCTCGTTATCAAGGTGTTTCTACAGCTGACT
# Right flank :  CAGAACTTTCAATGTGAGTTGTGACCAATGAAGCATTTAAAAATGATGAGAGATATAGAAGTTATGAAGGCAACGTTTTAAAAATTACAAATAATTCACAATTCTGTTGTTGTAAACAAATAAATGTTGTAAAATTAAATTAACATTTTAAGCGATAAAATGGGGTCTTATACTTTTTTGGTGAATGTTTGTATTTTTGCATATATTTTAGTCATAGTTATTTAAAGTGTAAGTATTAGTGCTTTTGATTAAAATTTTGAAGAAATAATAAGTGATTAAAAGATGTTGAGATTGAATATACTACTGTATTGATACAATGACTCACTGAATAGTACCCTTGTTTTTATCTAGGGAGGTGTAAAAATGAAAGATATCATTTACGTTGAGAACCATCATTTTGTCAGTGTTAAAGGGGAAAGTATCAAGTTTAAAAATATTATTGATAAATCAGAGCAATATTTTTTAGTAGATGATATCGAAGCACTGATATTTGATAGTCA

# Questionable array : NO	 Score: 3.22
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AATCGAATAGAGACCCCGATATTAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:52.78%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.30,-6.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//