Array 1 178428-181189 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011105.1 Legionella pneumophila strain L10-023 isolate Ulm chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 178428 37 100.0 36 ..................................... CTTCATTGCAGGGTACAGTTGAAAATTCCCTTACAG 178501 37 100.0 34 ..................................... TAAATGAATTTTCAATGATTTTAGCGGCTTCGAT 178572 37 100.0 33 ..................................... CCGGATAAAATCGGCAAGGCTTGTGGGTGACGA 178642 37 100.0 35 ..................................... CTTTGAAAAGGCTCATACCTTGTTACCCCTTGCAT 178714 37 100.0 33 ..................................... AGAGTGATCACTCTTGAAGATGCTCTTGGTTGG 178784 37 100.0 30 ..................................... TGATAATTTAAGAACATATAATAATTCTTT 178851 37 100.0 33 ..................................... ATGAATAAAAATGTCTCTAACATGTCAATTCTC 178921 37 100.0 35 ..................................... TACAATTAAAGTATATGAAGCATTCAAAGATTTCT 178993 37 100.0 36 ..................................... ACTTTCACTGTAACAAGAAACGCCGACGGCAGAGGC 179066 37 100.0 35 ..................................... TTATATTCTCCACGTTCATTATTTGTACAATATGA 179138 37 100.0 35 ..................................... TTCCATTCGGCGGCACGTTCGCTGGTTGGATCAAC 179210 37 100.0 35 ..................................... AATATAACACCAATGATTCCGGTATAAATCACTAA 179282 37 100.0 36 ..................................... GTCTCTCCAGAAGAACAGGCCAAGCGAAATGAAGAT 179355 37 100.0 34 ..................................... TTTAATGTTCTTTGTGCAGTCATTGATTCAGGTA 179426 37 100.0 35 ..................................... TTATCGTCTATAACTACTAGACCGTCATCAGTAAC 179498 37 100.0 34 ..................................... ATAATACGGTTTTGTAAGCCGTCTAATTCACGTG 179569 37 100.0 35 ..................................... TCTATTAACAGCCCATTAACTGATCGACAAGGACG 179641 37 100.0 33 ..................................... ATTGCAAGCGGGTTTGATCGTGTTATTATAAGA 179711 37 100.0 34 ..................................... TTTATTTAGTCGTTTAGAAACCATGCGCCTCAAT 179782 37 100.0 35 ..................................... GTACTGGCCGACCAGACTACGGTACTTCCTGATCC 179854 37 100.0 35 ..................................... AAAACTTTCATTTGTTAAATTACGCATTTCATTTA 179926 37 100.0 34 ..................................... ATAGTTAGAAGATTTACTCTAGGAGTTTATTGGC 179997 37 100.0 35 ..................................... TGTAGCGAAGGCGAGGTTCCATAATGTATAAATTT 180069 37 100.0 34 ..................................... GTGCATGGTTTGCGCTTTGCAACCCTTCCGCTGA 180140 37 100.0 35 ..................................... TTGTGGTTATGCTTGTTCCTGTACGTGCTGTTACT 180212 37 100.0 35 ..................................... TCATAACTCTATTCAAATTGCCAAAGTAAGCAATC 180284 37 100.0 37 ..................................... TCAGTACAGCAGCTTTAATCTCTGCAATCGCCTTAGA 180358 37 100.0 35 ..................................... CTCTAGCCCGTCATATTCTTCAACTACCCAATCTA 180430 37 100.0 36 ..................................... TTTTGAATGTCTGTTTCAGTGTCGAAACTTAGTAAT 180503 37 100.0 35 ..................................... GCATCTTCTGAATTAGCCACGTCTTCAAGACTGTT 180575 37 100.0 35 ..................................... TCTAACTAGTTGAGGCGCTCTAGCTTTTATTTCAG 180647 37 100.0 35 ..................................... AACAGAAAACATGCACAGAAGAAACTGGAAAGCAG 180719 37 100.0 34 ..................................... TCCTATACCTTGTCACAATTTCCTCATATGGCTC 180790 37 100.0 35 ..................................... ACACCTACACCGTACTGAGCACCATAGTGTTCAAC 180862 37 100.0 35 ..................................... CTTCCTGAATTAAACTTATTGTGTTAACTTTTTCA 180934 37 100.0 34 ..................................... TTGCTGATGCTTCTCTAGCTGCTGATTCTTGTAT 181005 37 100.0 36 ..................................... CATAATTGGGAATTGGTGTGAAATGCTCACCGTCCG 181078 37 100.0 38 ..................................... TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 181153 37 86.5 0 .......................TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 39 37 99.7 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCT # Right flank : TACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //