Array 1 454376-456457 **** Predicted by CRISPRDetect 2.4 *** >NZ_POWW01000002.1 Neisseria sicca strain C2007003584 C2007003584_S11_ctg_1426, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 454376 36 100.0 30 .................................... CTTGCCGCCGTCCGCAAACTGAAAGACGGA 454442 36 100.0 30 .................................... AAATTGCCTTTTGTAGGCAATGCTGCCCAG 454508 36 100.0 30 .................................... GAATTTTCCGTAACCTATGCCGATAATTCT 454574 36 100.0 30 .................................... CGCCAAATTTTCCGACATCCGCGCATTAAA 454640 36 100.0 30 .................................... TGCCAAAGGCTGGCAGCTTCTCGGAGAGTG 454706 36 100.0 30 .................................... AACGCCCGACGACGATGCCGAAAAAGCAGA 454772 36 100.0 30 .................................... ACAGCAAGAACAGCAATTATAGCGGCTGGC 454838 36 100.0 30 .................................... TCAAAGGTATCACCATAAACACCGTAAACA 454904 36 100.0 30 .................................... AGGCCCTAACTTAGAACCTTCAGGATTACA 454970 36 100.0 30 .................................... TTAGCAACAGTCAAGCCGACGCCAGTCAAA 455036 36 100.0 30 .................................... AGCCGTCATCATGATGTTCAGTCAATAAAC 455102 36 100.0 30 .................................... ATCTTATTATGGCGCCCAAACGAAAAAATC 455168 36 100.0 30 .................................... ACCCGCAGCCACCCAGATTTCTGCACGAGA 455234 36 100.0 30 .................................... CGGGTATCATTCTTCATTACTCTTTTCTCT 455300 36 100.0 30 .................................... CGAAAATTTCACACCCCCCGTATTACTAGA 455366 36 100.0 30 .................................... GTTGATGAAATAACTCTGCAAAGAATTCAG 455432 36 100.0 30 .................................... CCCAACGGATCCGCCACCACCCGCGCCCGA 455498 36 100.0 30 .................................... TTACGGTCTGTTCGTTATAAGTCCAAGTCT 455564 36 100.0 30 .................................... CGGATTTGCGCCATTATTTCCGCCAGCGAG 455630 36 100.0 30 .................................... TATGCTTACGGTGTGTTTCTGTCTTAAGTG 455696 36 100.0 30 .................................... TTCAGGTTCATTTTGTTTTCCTTTACGAAA 455762 36 100.0 30 .................................... AGCAAAAGAAACAGTAGGAATAAAAAAAGC 455828 36 100.0 30 .................................... ATAAACCATCATGGCCGCCATTAAATAAGC 455894 36 100.0 30 .................................... CGCATACGCACACCCAAAGGCGTCTTATGA 455960 36 100.0 30 .................................... CGTGAGAACTTCGCCGGTATCTTTGTCGAT 456026 36 100.0 30 .................................... CGGTTGAGTCTGCATATAAAACGAAGAACT 456092 36 100.0 30 .................................... TGAAAAAACAGTAATATCAACTCTAATTTC 456158 36 100.0 30 .................................... CCTTTTACTGCTTTCAACATTTCTCGAAAG 456224 36 100.0 30 .................................... TCAGAAGAACATCTCTATTCACAGTTGCAA 456290 36 100.0 30 .................................... TTATGATTCAGAGGAATATCAAGACTTCAT 456356 36 100.0 30 .................................... TTTTGAATCCTCCATAGACTGGCAAAAAAC 456422 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 32 36 100.0 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : CTGCTCAATCAGCGCGACCGTTTCATCGATTTTTTCCTGGGCGATCGGGCGTTTGTGCAAAGCCCGTTCCAAACTGGTTTTCAGCTTGTGCGGATTAAACGCCACGCGCGTACCGTTGGATTTAATCACCTGCGGCATCCTCATTTCAACCGTTTCAAACGTGCTGAACCGCTGTCCGCACTCCAAACAGCGGCGGCGGCGGCGGATACTGTTCGTCTCTTCCAAGAGCCGCGAATCTGTAACTTGAGTATTGGGATGCTGACAAAACGGACATTTCATAAGTTTTTGAGTTTATTTGTTTGTGAAACGGAATTGTAGCCGATTGAGTTATTCCCGTATAGTCGGTAGGTTTATTGAGGGTTGAAGAGGTCGTCTGAAAACGGAAATTCGAGCTTTCAGACGACCCTGCAGGAAATAATATGCGGTGCCAATTTCTGATTTTATTCTTTCCTATTTTGCAGTGCTACAATGCATCGAATGACGCATACTGACTTGTATGA # Right flank : TACCTCAGCGGGGAATCCTTATTTTATAAGGATTCCCCGCTTTCTTTTGTCTAAAAAACGGAGATTAGAACAGCAATAATTGGTCTGAATTAACCTTTTTTTCTTGGGTTTTGAGTTCGCCTAAAAGCAGTTTCATGGCGGCAAACTGCTTTTCTGTTACTTCCAAACAGCGTATCGAGCCTTCTTGCGGCAGGTTGACGCATAGTCTGTTGTGGTGTTTTTGTAACGCATCTCTGCCTTTAACAATCCGGCTGTATACGGAAAGTTGCAGCATTTGATAGCCGTCTTTCAATAGGAAATGTCGGAATTGGTTGGCGGCTTTGCGTTTGGCGACGGTGGTAACCGGCAGGTCGAAAAAGACGATAATCCGCATAAACTTTGCCTCACTCATATTGATATTCTTTCAAAGGCAGGATTTCGGGCAGTTTCAGCAGTCTGGCGTTTTTGGCGGCAAGGCTCGGCTGGAATGAGGCAATCATTTTGTCTATGGCTGCCAGTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //